RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 WDR11Q9BZH6 1224 aa9.19□□□□□ -0.94
SPG11-209ENST00000558253 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.19□□□□□ -0.94
SPG11-209ENST00000558253 TUFT1Q9NNX1 390 aa9.19□□□□□ -0.94
SPG11-209ENST00000558253 STK32BQ9NY57 414 aa9.19□□□□□ -0.94
SPG11-209ENST00000558253 MAP3K20Q9NYL2 800 aaKnown RBP9.19□□□□□ -0.94
SPG11-209ENST00000558253 CEP72Q9P209 647 aa9.19□□□□□ -0.94
SPG11-209ENST00000558253 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.19□□□□□ -0.94
SPG11-209ENST00000558253 PNMA3Q9UL41 463 aa9.19□□□□□ -0.94
SPG11-209ENST00000558253 KIAA1024Q9UPX6 916 aa9.19□□□□□ -0.94
SPG11-209ENST00000558253 TRAF3IP3Q9Y228 551 aa9.19□□□□□ -0.94
SPG11-209ENST00000558253 TMX2Q9Y320 296 aa9.19□□□□□ -0.94
SPG11-209ENST00000558253 MRPL11Q9Y3B7 192 aaKnown RBP9.19□□□□□ -0.94
SPG11-209ENST00000558253 JRKLQ9Y4A0 524 aa9.19□□□□□ -0.94
SPG11-209ENST00000558253 FHOD1Q9Y613 1164 aa9.19□□□□□ -0.94
SPG11-209ENST00000558253 SAR1BQ9Y6B6 198 aa9.19□□□□□ -0.94
SPG11-209ENST00000558253 ATP8B3O60423 1300 aa9.19□□□□□ -0.94
SPG11-209ENST00000558253 CCDC66A2RUB6 948 aa9.18□□□□□ -0.94
SPG11-209ENST00000558253 RASSF10A6NK89 507 aa9.18□□□□□ -0.94
SPG11-209ENST00000558253 RBAK-RBAKDNI3L0D1 243 aa9.18□□□□□ -0.94
SPG11-209ENST00000558253 TRAF5O00463 557 aa9.18□□□□□ -0.94
SPG11-209ENST00000558253 PDXKO00764 312 aa9.18□□□□□ -0.94
SPG11-209ENST00000558253 SLC16A3O15427 465 aaKnown RBP9.18□□□□□ -0.94
SPG11-209ENST00000558253 PJA2O43164 708 aa9.18□□□□□ -0.94
SPG11-209ENST00000558253 COBLO75128 1261 aa9.18□□□□□ -0.94
SPG11-209ENST00000558253 UBE4BO95155 1302 aa9.18□□□□□ -0.94
SPG11-209ENST00000558253 EYA4O95677 639 aa9.18□□□□□ -0.94
SPG11-209ENST00000558253 SERPING1P05155 500 aa9.18□□□□□ -0.94
SPG11-209ENST00000558253 VIL1P09327 827 aaKnown RBP9.18□□□□□ -0.94
SPG11-209ENST00000558253 PNMA6AP0CW24 399 aaPredicted RBP9.18□□□□□ -0.94
SPG11-209ENST00000558253 CYP11B2P19099 503 aa9.18□□□□□ -0.94
SPG11-209ENST00000558253 ZNF76P36508 570 aa9.18□□□□□ -0.94
SPG11-209ENST00000558253 STAT2P52630 851 aa9.18□□□□□ -0.94
SPG11-209ENST00000558253 SLC12A3P55017 1021 aa9.18□□□□□ -0.94
SPG11-209ENST00000558253 SETQ01105 290 aaPredicted RBP9.18□□□□□ -0.94
SPG11-209ENST00000558253 AMPD2Q01433 879 aa9.18□□□□□ -0.94
SPG11-209ENST00000558253 PDE4CQ08493 712 aa9.18□□□□□ -0.94
SPG11-209ENST00000558253 TCP10Q12799 353 aa9.18□□□□□ -0.94
SPG11-209ENST00000558253 IKQ13123 557 aaPredicted RBP9.18□□□□□ -0.94
SPG11-209ENST00000558253 SLC15A2Q16348 729 aa9.18□□□□□ -0.94
SPG11-209ENST00000558253 BMT2Q1RMZ1 405 aa9.18□□□□□ -0.94
SPG11-209ENST00000558253 SLC9C1Q4G0N8 1177 aa9.18□□□□□ -0.94
SPG11-209ENST00000558253 CCDC40Q4G0X9 1142 aa9.18□□□□□ -0.94
SPG11-209ENST00000558253 WDR93Q6P2C0 686 aa9.18□□□□□ -0.94
SPG11-209ENST00000558253 RSBN1LQ6PCB5 846 aaPredicted RBP9.18□□□□□ -0.94
SPG11-209ENST00000558253 SH3BP5LQ7L8J4 393 aa9.18□□□□□ -0.94
SPG11-209ENST00000558253 HDXQ7Z353 690 aa9.18□□□□□ -0.94
SPG11-209ENST00000558253 CACNA2D4Q7Z3S7 1137 aa9.18□□□□□ -0.94
SPG11-209ENST00000558253 KRT26Q7Z3Y9 468 aa9.18□□□□□ -0.94
SPG11-209ENST00000558253 GPBP1Q86WP2 473 aa9.18□□□□□ -0.94
SPG11-209ENST00000558253 ZFPM1Q8IX07 1006 aa9.18□□□□□ -0.94
SPG11-209ENST00000558253 AGBL3Q8NEM8 1001 aa9.18□□□□□ -0.94
SPG11-209ENST00000558253 SECISBP2LQ93073 1101 aaKnown RBP9.18□□□□□ -0.94
SPG11-209ENST00000558253 WNT2BQ93097 391 aa9.18□□□□□ -0.94
SPG11-209ENST00000558253 CSRNP1Q96S65 589 aa9.18□□□□□ -0.94
SPG11-209ENST00000558253 TSPYL1Q9H0U9 437 aa9.18□□□□□ -0.94
SPG11-209ENST00000558253 DEF6Q9H4E7 631 aa9.18□□□□□ -0.94
SPG11-209ENST00000558253 MMRN2Q9H8L6 949 aa9.18□□□□□ -0.94
SPG11-209ENST00000558253 AGPAT5Q9NUQ2 364 aa9.18□□□□□ -0.94
SPG11-209ENST00000558253 ZNF446Q9NWS9 450 aa9.18□□□□□ -0.94
SPG11-209ENST00000558253 SEL1LQ9UBV2 794 aa9.18□□□□□ -0.94
SPG11-209ENST00000558253 BAZ2BQ9UIF8 2168 aaKnown RBP9.18□□□□□ -0.94
SPG11-209ENST00000558253 FEM1BQ9UK73 627 aa9.18□□□□□ -0.94
SPG11-209ENST00000558253 FBXL5Q9UKA1 691 aa9.18□□□□□ -0.94
SPG11-209ENST00000558253 GUCA1BQ9UMX6 200 aa9.18□□□□□ -0.94
SPG11-209ENST00000558253 REXO2Q9Y3B8 237 aaKnown RBP9.18□□□□□ -0.94
SPG11-209ENST00000558253 PCDHA2Q9Y5H9 948 aa9.18□□□□□ -0.94
SPG11-209ENST00000558253 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.18□□□□□ -0.94
SPG11-209ENST00000558253 GTPBP10A4D1E9 387 aaKnown RBP9.17□□□□□ -0.94
SPG11-209ENST00000558253 USP17L15C9J2P7 530 aa9.17□□□□□ -0.94
SPG11-209ENST00000558253 USP17L13C9JLJ4 530 aa9.17□□□□□ -0.94
SPG11-209ENST00000558253 USP17L11C9JVI0 530 aa9.17□□□□□ -0.94
SPG11-209ENST00000558253 USP17L18D6R9N7 530 aa9.17□□□□□ -0.94
SPG11-209ENST00000558253 USP17L22D6RA61 530 aa9.17□□□□□ -0.94
SPG11-209ENST00000558253 USP17L17D6RBQ6 530 aa9.17□□□□□ -0.94
SPG11-209ENST00000558253 USP17L19D6RCP7 530 aa9.17□□□□□ -0.94
SPG11-209ENST00000558253 USP17L20D6RJB6 530 aa9.17□□□□□ -0.94
SPG11-209ENST00000558253 GCOM1H8Y6P7 765 aaPredicted RBP9.17□□□□□ -0.94
SPG11-209ENST00000558253 SMAPO00193 183 aa9.17□□□□□ -0.94
SPG11-209ENST00000558253 EIF3DO15371 548 aaKnown RBP eCLIP9.17□□□□□ -0.94
SPG11-209ENST00000558253 PPIP5K2O43314 1243 aa9.17□□□□□ -0.94
SPG11-209ENST00000558253 AKR1B10O60218 316 aa9.17□□□□□ -0.94
SPG11-209ENST00000558253 GH2P01242 217 aa9.17□□□□□ -0.94
SPG11-209ENST00000558253 POLR2MP0CAP2 368 aa9.17□□□□□ -0.94
SPG11-209ENST00000558253 TCP1P17987 556 aaKnown RBP9.17□□□□□ -0.94
SPG11-209ENST00000558253 RXRBP28702 533 aa9.17□□□□□ -0.94
SPG11-209ENST00000558253 HERVK_113P62684 666 aa9.17□□□□□ -0.94
SPG11-209ENST00000558253 MAP3K10Q02779 954 aa9.17□□□□□ -0.94
SPG11-209ENST00000558253 SPIRE1Q08AE8 756 aa9.17□□□□□ -0.94
SPG11-209ENST00000558253 USP17L24Q0WX57 530 aa9.17□□□□□ -0.94
SPG11-209ENST00000558253 MYBPC2Q14324 1141 aa9.17□□□□□ -0.94
SPG11-209ENST00000558253 DLGAP5Q15398 846 aa9.17□□□□□ -0.94
SPG11-209ENST00000558253 KNOP1Q1ED39 458 aaKnown RBP9.17□□□□□ -0.94
SPG11-209ENST00000558253 PRR16Q569H4 304 aa9.17□□□□□ -0.94
SPG11-209ENST00000558253 SFMBT2Q5VUG0 894 aa9.17□□□□□ -0.94
SPG11-209ENST00000558253 PDXDC1Q6P996 788 aa9.17□□□□□ -0.94
SPG11-209ENST00000558253 USP17L6PQ6QN14 398 aa9.17□□□□□ -0.94
SPG11-209ENST00000558253 NIPA1Q7RTP0 329 aa9.17□□□□□ -0.94
SPG11-209ENST00000558253 ZNF572Q7Z3I7 529 aaPredicted RBP9.17□□□□□ -0.94
SPG11-209ENST00000558253 TRIM59Q8IWR1 403 aa9.17□□□□□ -0.94
SPG11-209ENST00000558253 GOLGA5Q8TBA6 731 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms