RNA–Protein interactions for RNA: ENST00000558218.5

USP3-207, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-207ENST00000558218 GNA11P29992 359 aa11.56□□□□□ -0.56
USP3-207ENST00000558218 CDC27P30260 824 aa11.56□□□□□ -0.56
USP3-207ENST00000558218 ADD1P35611 737 aaKnown RBP11.56□□□□□ -0.56
USP3-207ENST00000558218 ADCY7P51828 1080 aa11.56□□□□□ -0.56
USP3-207ENST00000558218 RUFY3Q7L099 469 aa11.56□□□□□ -0.56
USP3-207ENST00000558218 NIPA1Q7RTP0 329 aa11.56□□□□□ -0.56
USP3-207ENST00000558218 DEFB128Q7Z7B8 93 aa11.56□□□□□ -0.56
USP3-207ENST00000558218 RAB11FIP4Q86YS3 637 aa11.56□□□□□ -0.56
USP3-207ENST00000558218 BRF1Q92994 677 aa11.56□□□□□ -0.56
USP3-207ENST00000558218 FAM161BQ96MY7 647 aa11.56□□□□□ -0.56
USP3-207ENST00000558218 MXRA8Q9BRK3 442 aa11.56□□□□□ -0.56
USP3-207ENST00000558218 FTOQ9C0B1 505 aaKnown RBP eCLIP11.56□□□□□ -0.56
USP3-207ENST00000558218 ZMYND12Q9H0C1 365 aa11.56□□□□□ -0.56
USP3-207ENST00000558218 RNPEPQ9H4A4 650 aa11.56□□□□□ -0.56
USP3-207ENST00000558218 SLC28A3Q9HAS3 691 aa11.56□□□□□ -0.56
USP3-207ENST00000558218 NRCAMQ92823 1304 aa11.56□□□□□ -0.56
USP3-207ENST00000558218 GRXCR1A8MXD5 290 aa11.55□□□□□ -0.56
USP3-207ENST00000558218 MEIS1O00470 390 aa11.55□□□□□ -0.56
USP3-207ENST00000558218 DLL1O00548 723 aa11.55□□□□□ -0.56
USP3-207ENST00000558218 ATP9AO75110 1047 aa11.55□□□□□ -0.56
USP3-207ENST00000558218 SCG2P13521 617 aa11.55□□□□□ -0.56
USP3-207ENST00000558218 SREBF1P36956 1147 aa11.55□□□□□ -0.56
USP3-207ENST00000558218 CLK2P49760 499 aaKnown RBP11.55□□□□□ -0.56
USP3-207ENST00000558218 AKAP17AQ02040 695 aaKnown RBP11.55□□□□□ -0.56
USP3-207ENST00000558218 APOBRQ0VD83 1088 aa11.55□□□□□ -0.56
USP3-207ENST00000558218 GRIN2CQ14957 1233 aa11.55□□□□□ -0.56
USP3-207ENST00000558218 UBE2SQ16763 222 aa11.55□□□□□ -0.56
USP3-207ENST00000558218 TRIM71Q2Q1W2 868 aaKnown RBP11.55□□□□□ -0.56
USP3-207ENST00000558218 CEP55Q53EZ4 464 aa11.55□□□□□ -0.56
USP3-207ENST00000558218 CNKSR3Q6P9H4 555 aa11.55□□□□□ -0.56
USP3-207ENST00000558218 FAM43BQ6ZT52 329 aaPredicted RBP11.55□□□□□ -0.56
USP3-207ENST00000558218 RPAINQ86UA6 219 aa11.55□□□□□ -0.56
USP3-207ENST00000558218 FAM177A1Q8N128 213 aaPredicted RBP11.55□□□□□ -0.56
USP3-207ENST00000558218 DHX38Q92620 1227 aaKnown RBP11.55□□□□□ -0.56
USP3-207ENST00000558218 ATP6V0A1Q93050 837 aa11.55□□□□□ -0.56
USP3-207ENST00000558218 ZNF274Q96GC6 653 aaPredicted RBP11.55□□□□□ -0.56
USP3-207ENST00000558218 RNF26Q9BY78 433 aaPredicted RBP11.55□□□□□ -0.56
USP3-207ENST00000558218 SMARCAD1Q9H4L7 1026 aa11.55□□□□□ -0.56
USP3-207ENST00000558218 BCAS3Q9H6U6 928 aa11.55□□□□□ -0.56
USP3-207ENST00000558218 C6orf50Q9HD87 102 aa11.55□□□□□ -0.56
USP3-207ENST00000558218 KCNH7Q9NS40 1196 aa11.55□□□□□ -0.56
USP3-207ENST00000558218 ERAP1Q9NZ08 941 aa11.55□□□□□ -0.56
USP3-207ENST00000558218 KIAA1468Q9P260 1216 aa11.55□□□□□ -0.56
USP3-207ENST00000558218 CYP46A1Q9Y6A2 500 aa11.55□□□□□ -0.56
USP3-207ENST00000558218 KAT6AQ92794 2004 aa11.55□□□□□ -0.56
USP3-207ENST00000558218 NFASCO94856 1347 aa11.55□□□□□ -0.56
USP3-207ENST00000558218 MYO9BQ13459 2157 aa11.54□□□□□ -0.56
USP3-207ENST00000558218 ZBBXA8MT70 800 aa11.54□□□□□ -0.56
USP3-207ENST00000558218 CYP3A4P08684 503 aa11.54□□□□□ -0.56
USP3-207ENST00000558218 SMIM10L2AP0DMW4 78 aa11.54□□□□□ -0.56
USP3-207ENST00000558218 SMIM10L2BP0DMW5 78 aa11.54□□□□□ -0.56
USP3-207ENST00000558218 IFNAR1P17181 557 aa11.54□□□□□ -0.56
USP3-207ENST00000558218 PDIA3P30101 505 aaKnown RBP11.54□□□□□ -0.56
USP3-207ENST00000558218 ADAM17P78536 824 aa11.54□□□□□ -0.56
USP3-207ENST00000558218 IKBKEQ14164 716 aa11.54□□□□□ -0.56
USP3-207ENST00000558218 GPNMBQ14956 572 aa11.54□□□□□ -0.56
USP3-207ENST00000558218 NTRK3Q16288 839 aa11.54□□□□□ -0.56
USP3-207ENST00000558218 BICD2Q8TD16 824 aa11.54□□□□□ -0.56
USP3-207ENST00000558218 PPP1R13LQ8WUF5 828 aa11.54□□□□□ -0.56
USP3-207ENST00000558218 SDF4Q9BRK5 362 aa11.54□□□□□ -0.56
USP3-207ENST00000558218 SLC4A5Q9BY07 1137 aa11.54□□□□□ -0.56
USP3-207ENST00000558218 ANO3Q9BYT9 981 aa11.54□□□□□ -0.56
USP3-207ENST00000558218 SH3GLB2Q9NR46 395 aa11.54□□□□□ -0.56
USP3-207ENST00000558218 SEPT9Q9UHD8 586 aaPredicted RBP11.54□□□□□ -0.56
USP3-207ENST00000558218 NAP1L2Q9ULW6 460 aaPredicted RBP11.54□□□□□ -0.56
USP3-207ENST00000558218 SCN5AQ14524 2016 aa11.53□□□□□ -0.56
USP3-207ENST00000558218 TET1Q8NFU7 2136 aa11.53□□□□□ -0.56
USP3-207ENST00000558218 GSTTP1A0A1W2PQM5 241 aa11.53□□□□□ -0.56
USP3-207ENST00000558218 RSPH10B2B2RC85 870 aa11.53□□□□□ -0.56
USP3-207ENST00000558218 BHMG1C9JSJ3 638 aaPredicted RBP11.53□□□□□ -0.56
USP3-207ENST00000558218 NBNO60934 754 aa11.53□□□□□ -0.56
USP3-207ENST00000558218 RSPH10BP0C881 870 aa11.53□□□□□ -0.56
USP3-207ENST00000558218 CPA1P15085 419 aa11.53□□□□□ -0.56
USP3-207ENST00000558218 FOSL2P15408 326 aa11.53□□□□□ -0.56
USP3-207ENST00000558218 TCF7P36402 384 aaPredicted RBP11.53□□□□□ -0.56
USP3-207ENST00000558218 KCNJ6P48051 423 aa11.53□□□□□ -0.56
USP3-207ENST00000558218 SLC26A2P50443 739 aa11.53□□□□□ -0.56
USP3-207ENST00000558218 PKN1Q16512 942 aa11.53□□□□□ -0.56
USP3-207ENST00000558218 FAM26DQ5JW98 314 aa11.53□□□□□ -0.56
USP3-207ENST00000558218 ZNF618Q5T7W0 954 aa11.53□□□□□ -0.56
USP3-207ENST00000558218 TAF2Q6P1X5 1199 aa11.53□□□□□ -0.56
USP3-207ENST00000558218 TRAF7Q6Q0C0 670 aa11.53□□□□□ -0.56
USP3-207ENST00000558218 PLPPR4Q7Z2D5 763 aa11.53□□□□□ -0.56
USP3-207ENST00000558218 CCDC148Q8NFR7 591 aa11.53□□□□□ -0.56
USP3-207ENST00000558218 CRYGNQ8WXF5 182 aa11.53□□□□□ -0.56
USP3-207ENST00000558218 MYLIPQ8WY64 445 aa11.53□□□□□ -0.56
USP3-207ENST00000558218 GAS2L1Q99501 681 aaPredicted RBP11.53□□□□□ -0.56
USP3-207ENST00000558218 JPH1Q9HDC5 661 aaPredicted RBP11.53□□□□□ -0.56
USP3-207ENST00000558218 SLC9A2Q9UBY0 812 aa11.53□□□□□ -0.56
USP3-207ENST00000558218 TANC1Q9C0D5 1861 aa11.53□□□□□ -0.56
USP3-207ENST00000558218 RRN3P2A6NIE6 340 aa11.52□□□□□ -0.57
USP3-207ENST00000558218 GOLGA8CPA6NN73 597 aa11.52□□□□□ -0.57
USP3-207ENST00000558218 TREHO43280 583 aa11.52□□□□□ -0.57
USP3-207ENST00000558218 SORBS3O60504 671 aa11.52□□□□□ -0.57
USP3-207ENST00000558218 LGR5O75473 907 aa11.52□□□□□ -0.57
USP3-207ENST00000558218 ATG7O95352 703 aa11.52□□□□□ -0.57
USP3-207ENST00000558218 ZNF76P36508 570 aa11.52□□□□□ -0.57
USP3-207ENST00000558218 THPOP40225 353 aa11.52□□□□□ -0.57
USP3-207ENST00000558218 ANAPC15P60006 121 aa11.52□□□□□ -0.57
USP3-207ENST00000558218 ARHGAP4P98171 946 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms