RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 ATG7O95352 703 aa13.88□□□□□ -0.19
TPM1-209ENST00000558072 LYPLA2O95372 231 aa13.88□□□□□ -0.19
TPM1-209ENST00000558072 ZNF865P0CJ78 1059 aaPredicted RBP13.88□□□□□ -0.19
TPM1-209ENST00000558072 CYBAP13498 195 aa13.88□□□□□ -0.19
TPM1-209ENST00000558072 PRKAR2AP13861 404 aaKnown RBP13.88□□□□□ -0.19
TPM1-209ENST00000558072 ACTR2P61160 394 aa13.88□□□□□ -0.19
TPM1-209ENST00000558072 GRIN1Q05586 938 aa13.88□□□□□ -0.19
TPM1-209ENST00000558072 ZRSR1Q15695 479 aaKnown RBP13.88□□□□□ -0.19
TPM1-209ENST00000558072 PKN2Q16513 984 aaKnown RBP13.88□□□□□ -0.19
TPM1-209ENST00000558072 CCDC144BQ3MJ40 725 aa13.88□□□□□ -0.19
TPM1-209ENST00000558072 C4orf19Q8IY42 314 aa13.88□□□□□ -0.19
TPM1-209ENST00000558072 PPTC7Q8NI37 304 aa13.88□□□□□ -0.19
TPM1-209ENST00000558072 FAM167AQ96KS9 214 aa13.88□□□□□ -0.19
TPM1-209ENST00000558072 CCDC43Q96MW1 224 aaKnown RBP13.88□□□□□ -0.19
TPM1-209ENST00000558072 SPATA33Q96N06 139 aa13.88□□□□□ -0.19
TPM1-209ENST00000558072 HSD17B14Q9BPX1 270 aa13.88□□□□□ -0.19
TPM1-209ENST00000558072 TNMDQ9H2S6 317 aa13.88□□□□□ -0.19
TPM1-209ENST00000558072 BACH1O14867 736 aa13.87□□□□□ -0.19
TPM1-209ENST00000558072 DUSP11O75319 330 aaKnown RBP13.87□□□□□ -0.19
TPM1-209ENST00000558072 PPFIA4O75335 1185 aa13.87□□□□□ -0.19
TPM1-209ENST00000558072 NR1I2O75469 434 aa13.87□□□□□ -0.19
TPM1-209ENST00000558072 SMC2O95347 1197 aa13.87□□□□□ -0.19
TPM1-209ENST00000558072 SUPT20HL2P0C7V6 817 aa13.87□□□□□ -0.19
TPM1-209ENST00000558072 LIG1P18858 919 aa13.87□□□□□ -0.19
TPM1-209ENST00000558072 GRK4P32298 578 aa13.87□□□□□ -0.19
TPM1-209ENST00000558072 CPT1AP50416 773 aa13.87□□□□□ -0.19
TPM1-209ENST00000558072 SP2Q02086 613 aa13.87□□□□□ -0.19
TPM1-209ENST00000558072 SP4Q02446 784 aa13.87□□□□□ -0.19
TPM1-209ENST00000558072 SNW1Q13573 536 aaKnown RBP13.87□□□□□ -0.19
TPM1-209ENST00000558072 MTFR1Q15390 333 aa13.87□□□□□ -0.19
TPM1-209ENST00000558072 LY6KQ17RY6 165 aa13.87□□□□□ -0.19
TPM1-209ENST00000558072 TPRNQ4KMQ1 711 aa13.87□□□□□ -0.19
TPM1-209ENST00000558072 TMEM119Q4V9L6 283 aa13.87□□□□□ -0.19
TPM1-209ENST00000558072 SPECC1Q5M775 1068 aa13.87□□□□□ -0.19
TPM1-209ENST00000558072 ABHD15Q6UXT9 468 aa13.87□□□□□ -0.19
TPM1-209ENST00000558072 KRBA2Q6ZNG9 492 aa13.87□□□□□ -0.19
TPM1-209ENST00000558072 SV2BQ7L1I2 683 aa13.87□□□□□ -0.19
TPM1-209ENST00000558072 CATSPER3Q86XQ3 398 aa13.87□□□□□ -0.19
TPM1-209ENST00000558072 GPT2Q8TD30 523 aa13.87□□□□□ -0.19
TPM1-209ENST00000558072 DHX58Q96C10 678 aa13.87□□□□□ -0.19
TPM1-209ENST00000558072 SMARCAD1Q9H4L7 1026 aa13.87□□□□□ -0.19
TPM1-209ENST00000558072 NRBP2Q9NSY0 501 aa13.87□□□□□ -0.19
TPM1-209ENST00000558072 KCND2Q9NZV8 630 aa13.87□□□□□ -0.19
TPM1-209ENST00000558072 HTTP42858 3142 aa13.86□□□□□ -0.19
TPM1-209ENST00000558072 POTEFA5A3E0 1075 aa13.86□□□□□ -0.19
TPM1-209ENST00000558072 SEPT4O43236 478 aa13.86□□□□□ -0.19
TPM1-209ENST00000558072 SLITRK3O94933 977 aa13.86□□□□□ -0.19
TPM1-209ENST00000558072 CAPN2P17655 700 aa13.86□□□□□ -0.19
TPM1-209ENST00000558072 PLCG1P19174 1290 aa13.86□□□□□ -0.19
TPM1-209ENST00000558072 CNGA1P29973 690 aa13.86□□□□□ -0.19
TPM1-209ENST00000558072 KARSQ15046 597 aaKnown RBP13.86□□□□□ -0.19
TPM1-209ENST00000558072 DGKDQ16760 1214 aa13.86□□□□□ -0.19
TPM1-209ENST00000558072 PLPPR4Q7Z2D5 763 aa13.86□□□□□ -0.19
TPM1-209ENST00000558072 TPH2Q8IWU9 490 aa13.86□□□□□ -0.19
TPM1-209ENST00000558072 PDILTQ8N807 584 aa13.86□□□□□ -0.19
TPM1-209ENST00000558072 OR6J1Q8NGC5 347 aa13.86□□□□□ -0.19
TPM1-209ENST00000558072 AFAP1L1Q8TED9 768 aa13.86□□□□□ -0.19
TPM1-209ENST00000558072 LARP4BQ92615 738 aaKnown RBP13.86□□□□□ -0.19
TPM1-209ENST00000558072 LXNQ9BS40 222 aa13.86□□□□□ -0.19
TPM1-209ENST00000558072 MMTAG2Q9BU76 263 aaKnown RBP13.86□□□□□ -0.19
TPM1-209ENST00000558072 TIPINQ9BVW5 301 aa13.86□□□□□ -0.19
TPM1-209ENST00000558072 UNC93B1Q9H1C4 597 aa13.86□□□□□ -0.19
TPM1-209ENST00000558072 GOLPH3LQ9H4A5 285 aa13.86□□□□□ -0.19
TPM1-209ENST00000558072 CLSTN2Q9H4D0 955 aa13.86□□□□□ -0.19
TPM1-209ENST00000558072 ZNF302Q9NR11 478 aa13.86□□□□□ -0.19
TPM1-209ENST00000558072 ANKEF1Q9NU02 776 aa13.86□□□□□ -0.19
TPM1-209ENST00000558072 KCNG1Q9UIX4 513 aa13.86□□□□□ -0.19
TPM1-209ENST00000558072 ZNF215Q9UL58 517 aaPredicted RBP13.86□□□□□ -0.19
TPM1-209ENST00000558072 KIAA1024Q9UPX6 916 aa13.86□□□□□ -0.19
TPM1-209ENST00000558072 RBAK-RBAKDNI3L0D1 243 aa13.85□□□□□ -0.19
TPM1-209ENST00000558072 EML1O00423 815 aa13.85□□□□□ -0.19
TPM1-209ENST00000558072 EYA4O95677 639 aa13.85□□□□□ -0.19
TPM1-209ENST00000558072 RARBP10826 455 aa13.85□□□□□ -0.19
TPM1-209ENST00000558072 SMPD1P17405 629 aa13.85□□□□□ -0.19
TPM1-209ENST00000558072 CDC25AP30304 524 aa13.85□□□□□ -0.19
TPM1-209ENST00000558072 STAT5BP51692 787 aa13.85□□□□□ -0.19
TPM1-209ENST00000558072 XKR3Q5GH77 459 aa13.85□□□□□ -0.19
TPM1-209ENST00000558072 CAVIN1Q6NZI2 390 aaKnown RBP13.85□□□□□ -0.19
TPM1-209ENST00000558072 USP49Q70CQ1 688 aa13.85□□□□□ -0.19
TPM1-209ENST00000558072 RAD54LQ92698 747 aa13.85□□□□□ -0.19
TPM1-209ENST00000558072 DYDC2Q96IM9 177 aa13.85□□□□□ -0.19
TPM1-209ENST00000558072 GPR20Q99678 358 aa13.85□□□□□ -0.19
TPM1-209ENST00000558072 MCOLN1Q9GZU1 580 aa13.85□□□□□ -0.19
TPM1-209ENST00000558072 RMND1Q9NWS8 449 aa13.85□□□□□ -0.19
TPM1-209ENST00000558072 DBR1Q9UK59 544 aaKnown RBP13.85□□□□□ -0.19
TPM1-209ENST00000558072 EMSYQ7Z589 1322 aa13.85□□□□□ -0.19
TPM1-209ENST00000558072 IGKV6D-21A0A0A0MT36 114 aa13.84□□□□□ -0.19
TPM1-209ENST00000558072 MYADML2A6NDP7 307 aa13.84□□□□□ -0.19
TPM1-209ENST00000558072 PP2D1A8MPX8 630 aa13.84□□□□□ -0.19
TPM1-209ENST00000558072 MED24O75448 989 aa13.84□□□□□ -0.19
TPM1-209ENST00000558072 LGR5O75473 907 aa13.84□□□□□ -0.19
TPM1-209ENST00000558072 CCNE2O96020 404 aa13.84□□□□□ -0.19
TPM1-209ENST00000558072 SPATA31C1P0DKV0 1188 aa13.84□□□□□ -0.19
TPM1-209ENST00000558072 TCF7P36402 384 aaPredicted RBP13.84□□□□□ -0.19
TPM1-209ENST00000558072 ARHGAP1Q07960 439 aa13.84□□□□□ -0.19
TPM1-209ENST00000558072 GRB10Q13322 594 aa13.84□□□□□ -0.19
TPM1-209ENST00000558072 E2F4Q16254 413 aa13.84□□□□□ -0.19
TPM1-209ENST00000558072 LONRF3Q496Y0 759 aa13.84□□□□□ -0.19
TPM1-209ENST00000558072 SLC9C1Q4G0N8 1177 aa13.84□□□□□ -0.19
TPM1-209ENST00000558072 SWSAP1Q6NVH7 229 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms