RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 RBM43Q6ZSC3 357 aaKnown RBP18.86■□□□□ 0.61
SNX1-203ENST00000558040 SV2BQ7L1I2 683 aa18.86■□□□□ 0.61
SNX1-203ENST00000558040 BANK1Q8NDB2 785 aa18.86■□□□□ 0.61
SNX1-203ENST00000558040 SEPT1Q8WYJ6 367 aa18.86■□□□□ 0.61
SNX1-203ENST00000558040 SPATA33Q96N06 139 aa18.86■□□□□ 0.61
SNX1-203ENST00000558040 NACC1Q96RE7 527 aa18.86■□□□□ 0.61
SNX1-203ENST00000558040 WBP1LQ9NX94 342 aa18.86■□□□□ 0.61
SNX1-203ENST00000558040 ATG7O95352 703 aa18.85■□□□□ 0.61
SNX1-203ENST00000558040 AFMP43652 599 aa18.85■□□□□ 0.61
SNX1-203ENST00000558040 TNFAIP2Q03169 654 aa18.85■□□□□ 0.61
SNX1-203ENST00000558040 ABHD15Q6UXT9 468 aa18.85■□□□□ 0.61
SNX1-203ENST00000558040 SH3RF1Q7Z6J0 888 aa18.85■□□□□ 0.61
SNX1-203ENST00000558040 RAET1EQ8TD07 263 aa18.85■□□□□ 0.61
SNX1-203ENST00000558040 TRIB2Q92519 343 aa18.85■□□□□ 0.61
SNX1-203ENST00000558040 EMID1Q96A84 441 aaPredicted RBP18.85■□□□□ 0.61
SNX1-203ENST00000558040 BCAS3Q9H6U6 928 aa18.85■□□□□ 0.61
SNX1-203ENST00000558040 BLOC1S4Q9NUP1 217 aa18.85■□□□□ 0.61
SNX1-203ENST00000558040 KBTBD4Q9NVX7 518 aa18.85■□□□□ 0.61
SNX1-203ENST00000558040 FAM184BQ9ULE4 1060 aa18.85■□□□□ 0.61
SNX1-203ENST00000558040 SYCE3A1L190 88 aa18.84■□□□□ 0.61
SNX1-203ENST00000558040 BACH1O14867 736 aa18.84■□□□□ 0.61
SNX1-203ENST00000558040 GTPBP6O43824 516 aaPredicted RBP18.84■□□□□ 0.61
SNX1-203ENST00000558040 SMC2O95347 1197 aa18.84■□□□□ 0.61
SNX1-203ENST00000558040 LYPLA2O95372 231 aa18.84■□□□□ 0.61
SNX1-203ENST00000558040 ZNF865P0CJ78 1059 aaPredicted RBP18.84■□□□□ 0.61
SNX1-203ENST00000558040 CAP1Q01518 475 aa18.84■□□□□ 0.61
SNX1-203ENST00000558040 ARHGAP1Q07960 439 aa18.84■□□□□ 0.61
SNX1-203ENST00000558040 FAM160B1Q5W0V3 765 aa18.84■□□□□ 0.61
SNX1-203ENST00000558040 C4orf19Q8IY42 314 aa18.84■□□□□ 0.61
SNX1-203ENST00000558040 CKAP2LQ8IYA6 745 aa18.84■□□□□ 0.61
SNX1-203ENST00000558040 GABBR1Q9UBS5 961 aa18.84■□□□□ 0.61
SNX1-203ENST00000558040 DOCK5Q9H7D0 1870 aa18.84■□□□□ 0.61
SNX1-203ENST00000558040 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.83■□□□□ 0.6
SNX1-203ENST00000558040 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.83■□□□□ 0.6
SNX1-203ENST00000558040 E9PMD0 336 aa18.83■□□□□ 0.6
SNX1-203ENST00000558040 EYA4O95677 639 aa18.83■□□□□ 0.6
SNX1-203ENST00000558040 PLA2G4BP0C869 781 aa18.83■□□□□ 0.6
SNX1-203ENST00000558040 SMPD1P17405 629 aa18.83■□□□□ 0.6
SNX1-203ENST00000558040 MDM2Q00987 491 aaPredicted RBP18.83■□□□□ 0.6
SNX1-203ENST00000558040 PNOCQ13519 176 aa18.83■□□□□ 0.6
SNX1-203ENST00000558040 MCM6Q14566 821 aa18.83■□□□□ 0.6
SNX1-203ENST00000558040 PRAMEF19Q5SWL8 479 aa18.83■□□□□ 0.6
SNX1-203ENST00000558040 SWSAP1Q6NVH7 229 aa18.83■□□□□ 0.6
SNX1-203ENST00000558040 SASS6Q6UVJ0 657 aa18.83■□□□□ 0.6
SNX1-203ENST00000558040 KCNK18Q7Z418 384 aa18.83■□□□□ 0.6
SNX1-203ENST00000558040 GRAMD1CQ8IYS0 662 aa18.83■□□□□ 0.6
SNX1-203ENST00000558040 DNAJC5GQ8N7S2 189 aa18.83■□□□□ 0.6
SNX1-203ENST00000558040 PPTC7Q8NI37 304 aa18.83■□□□□ 0.6
SNX1-203ENST00000558040 LRRC15Q8TF66 581 aa18.83■□□□□ 0.6
SNX1-203ENST00000558040 COPS5Q92905 334 aa18.83■□□□□ 0.6
SNX1-203ENST00000558040 SMARCE1Q969G3 411 aa18.83■□□□□ 0.6
SNX1-203ENST00000558040 GPR20Q99678 358 aa18.83■□□□□ 0.6
SNX1-203ENST00000558040 AZI2Q9H6S1 392 aa18.83■□□□□ 0.6
SNX1-203ENST00000558040 ZNF302Q9NR11 478 aa18.83■□□□□ 0.6
SNX1-203ENST00000558040 KIAA1468Q9P260 1216 aa18.83■□□□□ 0.6
SNX1-203ENST00000558040 TSKSQ9UJT2 592 aa18.83■□□□□ 0.6
SNX1-203ENST00000558040 IGSF9BQ9UPX0 1349 aa18.82■□□□□ 0.6
SNX1-203ENST00000558040 IGKV6D-21A0A0A0MT36 114 aa18.82■□□□□ 0.6
SNX1-203ENST00000558040 GSTTP1A0A1W2PQM5 241 aa18.82■□□□□ 0.6
SNX1-203ENST00000558040 FOXN1O15353 648 aa18.82■□□□□ 0.6
SNX1-203ENST00000558040 ADCY3O60266 1144 aa18.82■□□□□ 0.6
SNX1-203ENST00000558040 HMGCRP04035 888 aa18.82■□□□□ 0.6
SNX1-203ENST00000558040 SSBP05455 408 aaKnown RBP eCLIP18.82■□□□□ 0.6
SNX1-203ENST00000558040 XRCC6P12956 609 aaKnown RBP eCLIP18.82■□□□□ 0.6
SNX1-203ENST00000558040 CYBAP13498 195 aa18.82■□□□□ 0.6
SNX1-203ENST00000558040 AKR1A1P14550 325 aa18.82■□□□□ 0.6
SNX1-203ENST00000558040 TCF7P36402 384 aaPredicted RBP18.82■□□□□ 0.6
SNX1-203ENST00000558040 ZNF445P59923 1031 aa18.82■□□□□ 0.6
SNX1-203ENST00000558040 DHX8Q14562 1220 aaKnown RBP18.82■□□□□ 0.6
SNX1-203ENST00000558040 CCDC60Q8IWA6 550 aaPredicted RBP18.82■□□□□ 0.6
SNX1-203ENST00000558040 OR6J1Q8NGC5 347 aa18.82■□□□□ 0.6
SNX1-203ENST00000558040 PXYLP1Q8TE99 480 aa18.82■□□□□ 0.6
SNX1-203ENST00000558040 CCDC43Q96MW1 224 aaKnown RBP18.82■□□□□ 0.6
SNX1-203ENST00000558040 BMP2KQ9NSY1 1161 aaPredicted RBP18.82■□□□□ 0.6
SNX1-203ENST00000558040 Q9Y3F1 56 aa18.82■□□□□ 0.6
SNX1-203ENST00000558040 LOXHD1Q8IVV2 1947 aa18.81■□□□□ 0.6
SNX1-203ENST00000558040 PRR29P0C7W0 189 aa18.81■□□□□ 0.6
SNX1-203ENST00000558040 CCDC192P0DO97 292 aa18.81■□□□□ 0.6
SNX1-203ENST00000558040 YWHABP31946 246 aaKnown RBP18.81■□□□□ 0.6
SNX1-203ENST00000558040 PSMC6P62333 389 aa18.81■□□□□ 0.6
SNX1-203ENST00000558040 DPYDQ12882 1025 aa18.81■□□□□ 0.6
SNX1-203ENST00000558040 UGCGQ16739 394 aa18.81■□□□□ 0.6
SNX1-203ENST00000558040 HSDL1Q3SXM5 330 aa18.81■□□□□ 0.6
SNX1-203ENST00000558040 OTUD6AQ7L8S5 288 aa18.81■□□□□ 0.6
SNX1-203ENST00000558040 SYT2Q8N9I0 419 aaPredicted RBP18.81■□□□□ 0.6
SNX1-203ENST00000558040 SLAIN1Q8ND83 568 aa18.81■□□□□ 0.6
SNX1-203ENST00000558040 AFAP1L1Q8TED9 768 aa18.81■□□□□ 0.6
SNX1-203ENST00000558040 PIGOQ8TEQ8 1089 aa18.81■□□□□ 0.6
SNX1-203ENST00000558040 STAMQ92783 540 aa18.81■□□□□ 0.6
SNX1-203ENST00000558040 MTRQ99707 1265 aa18.81■□□□□ 0.6
SNX1-203ENST00000558040 C7orf25Q9BPX7 421 aa18.81■□□□□ 0.6
SNX1-203ENST00000558040 BHMT2Q9H2M3 363 aa18.81■□□□□ 0.6
SNX1-203ENST00000558040 ANKEF1Q9NU02 776 aa18.81■□□□□ 0.6
SNX1-203ENST00000558040 WRAP73Q9P2S5 460 aaPredicted RBP18.81■□□□□ 0.6
SNX1-203ENST00000558040 DBR1Q9UK59 544 aaKnown RBP18.81■□□□□ 0.6
SNX1-203ENST00000558040 MAFBQ9Y5Q3 323 aaPredicted RBP18.81■□□□□ 0.6
SNX1-203ENST00000558040 EMSYQ7Z589 1322 aa18.8■□□□□ 0.6
SNX1-203ENST00000558040 ARHGEF35A5YM69 484 aa18.8■□□□□ 0.6
SNX1-203ENST00000558040 LGR5O75473 907 aa18.8■□□□□ 0.6
SNX1-203ENST00000558040 STAT5BP51692 787 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms