RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 RRP12Q5JTH9 1297 aaKnown RBP4□□□□□ -1.77
TRAV28-201ENST00000557548 CPZQ66K79 652 aa4□□□□□ -1.77
TRAV28-201ENST00000557548 ESRP1Q6NXG1 681 aaKnown RBP4□□□□□ -1.77
TRAV28-201ENST00000557548 HHIPL2Q6UWX4 724 aa4□□□□□ -1.77
TRAV28-201ENST00000557548 TTLL7Q6ZT98 887 aa4□□□□□ -1.77
TRAV28-201ENST00000557548 CEP68Q76N32 757 aa4□□□□□ -1.77
TRAV28-201ENST00000557548 CLEC10AQ8IUN9 316 aa4□□□□□ -1.77
TRAV28-201ENST00000557548 TEX2Q8IWB9 1127 aa4□□□□□ -1.77
TRAV28-201ENST00000557548 FBXL6Q8N531 539 aa4□□□□□ -1.77
TRAV28-201ENST00000557548 ZNF610Q8N9Z0 462 aa4□□□□□ -1.77
TRAV28-201ENST00000557548 UBE2FQ969M7 185 aa4□□□□□ -1.77
TRAV28-201ENST00000557548 E2F7Q96AV8 911 aa4□□□□□ -1.77
TRAV28-201ENST00000557548 RUNDC1Q96C34 613 aa4□□□□□ -1.77
TRAV28-201ENST00000557548 TMEM169Q96HH4 297 aa4□□□□□ -1.77
TRAV28-201ENST00000557548 HSPA12BQ96MM6 686 aa4□□□□□ -1.77
TRAV28-201ENST00000557548 FAM83CQ9BQN1 747 aa4□□□□□ -1.77
TRAV28-201ENST00000557548 ZDHHC5Q9C0B5 715 aa4□□□□□ -1.77
TRAV28-201ENST00000557548 SLC12A5Q9H2X9 1139 aa4□□□□□ -1.77
TRAV28-201ENST00000557548 ZMAT4Q9H898 229 aa4□□□□□ -1.77
TRAV28-201ENST00000557548 SP110Q9HB58 689 aa4□□□□□ -1.77
TRAV28-201ENST00000557548 ERVK13-1Q9NX77 482 aa4□□□□□ -1.77
TRAV28-201ENST00000557548 GULP1Q9UBP9 304 aa4□□□□□ -1.77
TRAV28-201ENST00000557548 CCDC189A1A4V9 331 aa3.99□□□□□ -1.77
TRAV28-201ENST00000557548 ANO9A1A5B4 782 aa3.99□□□□□ -1.77
TRAV28-201ENST00000557548 H7BY64 318 aa3.99□□□□□ -1.77
TRAV28-201ENST00000557548 MAN2B1O00754 1011 aa3.99□□□□□ -1.77
TRAV28-201ENST00000557548 PPFIA4O75335 1185 aa3.99□□□□□ -1.77
TRAV28-201ENST00000557548 OFD1O75665 1012 aa3.99□□□□□ -1.77
TRAV28-201ENST00000557548 TMEM253P0C7T8 217 aa3.99□□□□□ -1.77
TRAV28-201ENST00000557548 ENDOUP21128 410 aaKnown RBP3.99□□□□□ -1.77
TRAV28-201ENST00000557548 RPL10P27635 214 aaKnown RBP3.99□□□□□ -1.77
TRAV28-201ENST00000557548 SRSF2Q01130 221 aaKnown RBP3.99□□□□□ -1.77
TRAV28-201ENST00000557548 SPIRE1Q08AE8 756 aa3.99□□□□□ -1.77
TRAV28-201ENST00000557548 MORC3Q14149 939 aa3.99□□□□□ -1.77
TRAV28-201ENST00000557548 IFI16Q16666 785 aaKnown RBP3.99□□□□□ -1.77
TRAV28-201ENST00000557548 GRAMD1BQ3KR37 738 aa3.99□□□□□ -1.77
TRAV28-201ENST00000557548 GPR158Q5T848 1215 aa3.99□□□□□ -1.77
TRAV28-201ENST00000557548 B3GNT9Q6UX72 402 aa3.99□□□□□ -1.77
TRAV28-201ENST00000557548 EP400NLQ6ZTU2 488 aa3.99□□□□□ -1.77
TRAV28-201ENST00000557548 FRMD7Q6ZUT3 714 aa3.99□□□□□ -1.77
TRAV28-201ENST00000557548 WAPLQ7Z5K2 1190 aa3.99□□□□□ -1.77
TRAV28-201ENST00000557548 CATIPQ7Z7H3 387 aa3.99□□□□□ -1.77
TRAV28-201ENST00000557548 C11orf96Q7Z7L8 435 aa3.99□□□□□ -1.77
TRAV28-201ENST00000557548 MORC1Q86VD1 984 aa3.99□□□□□ -1.77
TRAV28-201ENST00000557548 SPACA3Q8IXA5 215 aa3.99□□□□□ -1.77
TRAV28-201ENST00000557548 SLC35G2Q8TBE7 412 aa3.99□□□□□ -1.77
TRAV28-201ENST00000557548 PIP4K2CQ8TBX8 421 aa3.99□□□□□ -1.77
TRAV28-201ENST00000557548 SH3RF2Q8TEC5 729 aa3.99□□□□□ -1.77
TRAV28-201ENST00000557548 JADE3Q92613 823 aa3.99□□□□□ -1.77
TRAV28-201ENST00000557548 TTC17Q96AE7 1141 aa3.99□□□□□ -1.77
TRAV28-201ENST00000557548 TRMT2BQ96GJ1 504 aaKnown RBP3.99□□□□□ -1.77
TRAV28-201ENST00000557548 MFSD14AQ96MC6 490 aa3.99□□□□□ -1.77
TRAV28-201ENST00000557548 TAAR9Q96RI9 348 aa3.99□□□□□ -1.77
TRAV28-201ENST00000557548 STRBPQ96SI9 672 aaKnown RBP3.99□□□□□ -1.77
TRAV28-201ENST00000557548 CD244Q9BZW8 370 aa3.99□□□□□ -1.77
TRAV28-201ENST00000557548 EPB41L1Q9H4G0 881 aa3.99□□□□□ -1.77
TRAV28-201ENST00000557548 C7orf69Q9H7B7 122 aa3.99□□□□□ -1.77
TRAV28-201ENST00000557548 MAN1C1Q9NR34 630 aa3.99□□□□□ -1.77
TRAV28-201ENST00000557548 C1orf112Q9NSG2 853 aa3.99□□□□□ -1.77
TRAV28-201ENST00000557548 DNAJC28Q9NX36 388 aa3.99□□□□□ -1.77
TRAV28-201ENST00000557548 MARCH2Q9P0N8 246 aa3.99□□□□□ -1.77
TRAV28-201ENST00000557548 SRPK3Q9UPE1 567 aa3.99□□□□□ -1.77
TRAV28-201ENST00000557548 ZNF281Q9Y2X9 895 aa3.99□□□□□ -1.77
TRAV28-201ENST00000557548 RASSF10A6NK89 507 aa3.98□□□□□ -1.77
TRAV28-201ENST00000557548 A6NNZ2 444 aa3.98□□□□□ -1.77
TRAV28-201ENST00000557548 C22orf46C9J442 243 aa3.98□□□□□ -1.77
TRAV28-201ENST00000557548 PMM2O15305 246 aa3.98□□□□□ -1.77
TRAV28-201ENST00000557548 CTNND1O60716 968 aaKnown RBP3.98□□□□□ -1.77
TRAV28-201ENST00000557548 ADAMTS4O75173 837 aa3.98□□□□□ -1.77
TRAV28-201ENST00000557548 CEACAM5P06731 702 aa3.98□□□□□ -1.77
TRAV28-201ENST00000557548 MYL3P08590 195 aa3.98□□□□□ -1.77
TRAV28-201ENST00000557548 OSMP13725 252 aa3.98□□□□□ -1.77
TRAV28-201ENST00000557548 PHKG2P15735 406 aa3.98□□□□□ -1.77
TRAV28-201ENST00000557548 C5AR1P21730 350 aa3.98□□□□□ -1.77
TRAV28-201ENST00000557548 CD40P25942 277 aa3.98□□□□□ -1.77
TRAV28-201ENST00000557548 SERPINB3P29508 390 aa3.98□□□□□ -1.77
TRAV28-201ENST00000557548 OXCT1P55809 520 aa3.98□□□□□ -1.77
TRAV28-201ENST00000557548 TEKQ02763 1124 aa3.98□□□□□ -1.77
TRAV28-201ENST00000557548 EGR3Q06889 387 aa3.98□□□□□ -1.77
TRAV28-201ENST00000557548 TMEM132BQ14DG7 1078 aa3.98□□□□□ -1.77
TRAV28-201ENST00000557548 ZRSR2Q15696 482 aaKnown RBP3.98□□□□□ -1.77
TRAV28-201ENST00000557548 FIGNQ5HY92 759 aa3.98□□□□□ -1.77
TRAV28-201ENST00000557548 TOR2AQ5JU69 321 aa3.98□□□□□ -1.77
TRAV28-201ENST00000557548 HABP4Q5JVS0 413 aaKnown RBP3.98□□□□□ -1.77
TRAV28-201ENST00000557548 CYB5RLQ6IPT4 315 aa3.98□□□□□ -1.77
TRAV28-201ENST00000557548 OTOP3Q7RTS5 596 aa3.98□□□□□ -1.77
TRAV28-201ENST00000557548 CREG2Q8IUH2 290 aa3.98□□□□□ -1.77
TRAV28-201ENST00000557548 Q8N1Y9 231 aa3.98□□□□□ -1.77
TRAV28-201ENST00000557548 TMEM52Q8NDY8 209 aa3.98□□□□□ -1.77
TRAV28-201ENST00000557548 VPS37AQ8NEZ2 397 aa3.98□□□□□ -1.77
TRAV28-201ENST00000557548 PARD3BQ8TEW8 1205 aa3.98□□□□□ -1.77
TRAV28-201ENST00000557548 RTF1Q92541 710 aaKnown RBP3.98□□□□□ -1.77
TRAV28-201ENST00000557548 FCRL2Q96LA5 508 aaPredicted RBP3.98□□□□□ -1.77
TRAV28-201ENST00000557548 ELAC2Q9BQ52 826 aaKnown RBP3.98□□□□□ -1.77
TRAV28-201ENST00000557548 QRSL1Q9H0R6 528 aaKnown RBP3.98□□□□□ -1.77
TRAV28-201ENST00000557548 CSRNP2Q9H175 543 aa3.98□□□□□ -1.77
TRAV28-201ENST00000557548 PPCSQ9HAB8 311 aa3.98□□□□□ -1.77
TRAV28-201ENST00000557548 PTPRHQ9HD43 1115 aa3.98□□□□□ -1.77
TRAV28-201ENST00000557548 DDX21Q9NR30 783 aaKnown RBP eCLIP3.98□□□□□ -1.77
TRAV28-201ENST00000557548 ATG3Q9NT62 314 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms