RNA–Protein interactions for RNA: ENST00000557498.1

ARHGEF40-208, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-208ENST00000557498 GPBP1Q86WP2 473 aa16.15■□□□□ 0.18
ARHGEF40-208ENST00000557498 MSL3Q8N5Y2 521 aaKnown RBP16.15■□□□□ 0.18
ARHGEF40-208ENST00000557498 MLKLQ8NB16 471 aa16.15■□□□□ 0.18
ARHGEF40-208ENST00000557498 NPLOC4Q8TAT6 608 aa16.15■□□□□ 0.18
ARHGEF40-208ENST00000557498 SOCS4Q8WXH5 440 aa16.15■□□□□ 0.18
ARHGEF40-208ENST00000557498 DDX12PQ92771 950 aa16.15■□□□□ 0.18
ARHGEF40-208ENST00000557498 BPIFA3Q9BQP9 254 aa16.15■□□□□ 0.18
ARHGEF40-208ENST00000557498 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.15■□□□□ 0.18
ARHGEF40-208ENST00000557498 DACH1Q9UI36 760 aa16.15■□□□□ 0.18
ARHGEF40-208ENST00000557498 DDX41Q9UJV9 622 aaKnown RBP16.15■□□□□ 0.18
ARHGEF40-208ENST00000557498 WDR81Q562E7 1941 aa16.15■□□□□ 0.18
ARHGEF40-208ENST00000557498 SYNGAP1Q96PV0 1343 aa16.15■□□□□ 0.18
ARHGEF40-208ENST00000557498 PVALEFA0A1B0GWK0 134 aa16.14■□□□□ 0.17
ARHGEF40-208ENST00000557498 TNPO2O14787 897 aaKnown RBP16.14■□□□□ 0.17
ARHGEF40-208ENST00000557498 ECM2O94769 699 aaPredicted RBP16.14■□□□□ 0.17
ARHGEF40-208ENST00000557498 FARP2O94887 1054 aaPredicted RBP16.14■□□□□ 0.17
ARHGEF40-208ENST00000557498 RHOBTB3O94955 611 aa16.14■□□□□ 0.17
ARHGEF40-208ENST00000557498 ARIH2O95376 493 aa16.14■□□□□ 0.17
ARHGEF40-208ENST00000557498 GGPS1O95749 300 aa16.14■□□□□ 0.17
ARHGEF40-208ENST00000557498 PSAPP07602 524 aa16.14■□□□□ 0.17
ARHGEF40-208ENST00000557498 HOXC6P09630 235 aa16.14■□□□□ 0.17
ARHGEF40-208ENST00000557498 SUPT20HL2P0C7V6 817 aa16.14■□□□□ 0.17
ARHGEF40-208ENST00000557498 PSMC5P62195 406 aa16.14■□□□□ 0.17
ARHGEF40-208ENST00000557498 SP4Q02446 784 aa16.14■□□□□ 0.17
ARHGEF40-208ENST00000557498 TTLL4Q14679 1199 aa16.14■□□□□ 0.17
ARHGEF40-208ENST00000557498 UGCGQ16739 394 aa16.14■□□□□ 0.17
ARHGEF40-208ENST00000557498 UVSSAQ2YD98 709 aa16.14■□□□□ 0.17
ARHGEF40-208ENST00000557498 ZNF658Q5TYW1 1059 aaPredicted RBP16.14■□□□□ 0.17
ARHGEF40-208ENST00000557498 MIS18BP1Q6P0N0 1132 aa16.14■□□□□ 0.17
ARHGEF40-208ENST00000557498 ABHD15Q6UXT9 468 aa16.14■□□□□ 0.17
ARHGEF40-208ENST00000557498 SCFD2Q8WU76 684 aa16.14■□□□□ 0.17
ARHGEF40-208ENST00000557498 USP6NLQ92738 828 aa16.14■□□□□ 0.17
ARHGEF40-208ENST00000557498 KATNBL1Q9H079 304 aa16.14■□□□□ 0.17
ARHGEF40-208ENST00000557498 BHMT2Q9H2M3 363 aa16.14■□□□□ 0.17
ARHGEF40-208ENST00000557498 BMP2KQ9NSY1 1161 aaPredicted RBP16.14■□□□□ 0.17
ARHGEF40-208ENST00000557498 EXOC1Q9NV70 894 aa16.14■□□□□ 0.17
ARHGEF40-208ENST00000557498 ZSWIM8A7E2V4 1837 aa16.13■□□□□ 0.17
ARHGEF40-208ENST00000557498 RBM47A0AV96 593 aaKnown RBP16.13■□□□□ 0.17
ARHGEF40-208ENST00000557498 SORBS3O60504 671 aa16.13■□□□□ 0.17
ARHGEF40-208ENST00000557498 DKC1O60832 514 aaKnown RBP eCLIP16.13■□□□□ 0.171e-6■■■■■ 30
ARHGEF40-208ENST00000557498 ATG7O95352 703 aa16.13■□□□□ 0.17
ARHGEF40-208ENST00000557498 SNAI1O95863 264 aaPredicted RBP16.13■□□□□ 0.17
ARHGEF40-208ENST00000557498 RGS2P41220 211 aa16.13■□□□□ 0.17
ARHGEF40-208ENST00000557498 FCGRTP55899 365 aa16.13■□□□□ 0.17
ARHGEF40-208ENST00000557498 IQCB1Q15051 598 aa16.13■□□□□ 0.17
ARHGEF40-208ENST00000557498 LY6KQ17RY6 165 aa16.13■□□□□ 0.17
ARHGEF40-208ENST00000557498 TAPT1Q6NXT6 567 aa16.13■□□□□ 0.17
ARHGEF40-208ENST00000557498 CCDC62Q6P9F0 684 aa16.13■□□□□ 0.17
ARHGEF40-208ENST00000557498 METTL7BQ6UX53 244 aa16.13■□□□□ 0.17
ARHGEF40-208ENST00000557498 DYMQ7RTS9 669 aa16.13■□□□□ 0.17
ARHGEF40-208ENST00000557498 LUZP1Q86V48 1076 aa16.13■□□□□ 0.17
ARHGEF40-208ENST00000557498 C4orf19Q8IY42 314 aa16.13■□□□□ 0.17
ARHGEF40-208ENST00000557498 PIGOQ8TEQ8 1089 aa16.13■□□□□ 0.17
ARHGEF40-208ENST00000557498 ATP6V0A1Q93050 837 aa16.13■□□□□ 0.17
ARHGEF40-208ENST00000557498 DNAJC19Q96DA6 116 aa16.13■□□□□ 0.17
ARHGEF40-208ENST00000557498 TINF2Q9BSI4 451 aa16.13■□□□□ 0.17
ARHGEF40-208ENST00000557498 GTPBP4Q9BZE4 634 aaKnown RBP16.13■□□□□ 0.17
ARHGEF40-208ENST00000557498 GABBR1Q9UBS5 961 aa16.13■□□□□ 0.17
ARHGEF40-208ENST00000557498 DBR1Q9UK59 544 aaKnown RBP16.13■□□□□ 0.17
ARHGEF40-208ENST00000557498 TELO2Q9Y4R8 837 aa16.13■□□□□ 0.17
ARHGEF40-208ENST00000557498 IGSF9BQ9UPX0 1349 aa16.13■□□□□ 0.17
ARHGEF40-208ENST00000557498 KRT18P05783 430 aaKnown RBP16.12■□□□□ 0.17
ARHGEF40-208ENST00000557498 MAP2K2P36507 400 aa16.12■□□□□ 0.17
ARHGEF40-208ENST00000557498 ARSHQ5FYA8 562 aa16.12■□□□□ 0.17
ARHGEF40-208ENST00000557498 CT47A1Q5JQC4 288 aaPredicted RBP16.12■□□□□ 0.17
ARHGEF40-208ENST00000557498 CELF3Q5SZQ8 465 aaKnown RBP16.12■□□□□ 0.17
ARHGEF40-208ENST00000557498 CCDC60Q8IWA6 550 aaPredicted RBP16.12■□□□□ 0.17
ARHGEF40-208ENST00000557498 DHX40Q8IX18 779 aaKnown RBP16.12■□□□□ 0.17
ARHGEF40-208ENST00000557498 AOPEPQ8N6M6 819 aa16.12■□□□□ 0.17
ARHGEF40-208ENST00000557498 APBA2Q99767 749 aa16.12■□□□□ 0.17
ARHGEF40-208ENST00000557498 CFHR5Q9BXR6 569 aa16.12■□□□□ 0.17
ARHGEF40-208ENST00000557498 PDGFCQ9NRA1 345 aa16.12■□□□□ 0.17
ARHGEF40-208ENST00000557498 GJD2Q9UKL4 321 aa16.12■□□□□ 0.17
ARHGEF40-208ENST00000557498 DOCK3Q8IZD9 2030 aa16.11■□□□□ 0.17
ARHGEF40-208ENST00000557498 ARID2Q68CP9 1835 aa16.11■□□□□ 0.17
ARHGEF40-208ENST00000557498 NPHP3-ACAD11A0A0J9YXS1 232 aa16.11■□□□□ 0.17
ARHGEF40-208ENST00000557498 GSTTP1A0A1W2PQM5 241 aa16.11■□□□□ 0.17
ARHGEF40-208ENST00000557498 ARHGEF35A5YM69 484 aa16.11■□□□□ 0.17
ARHGEF40-208ENST00000557498 TXNP10599 105 aaKnown RBP16.11■□□□□ 0.17
ARHGEF40-208ENST00000557498 XRCC6P12956 609 aaKnown RBP eCLIP16.11■□□□□ 0.17
ARHGEF40-208ENST00000557498 IDEP14735 1019 aa16.11■□□□□ 0.17
ARHGEF40-208ENST00000557498 CTGFP29279 349 aa16.11■□□□□ 0.17
ARHGEF40-208ENST00000557498 YWHABP31946 246 aaKnown RBP16.11■□□□□ 0.17
ARHGEF40-208ENST00000557498 VEGFBP49765 207 aa16.11■□□□□ 0.17
ARHGEF40-208ENST00000557498 RINT1Q6NUQ1 792 aa16.11■□□□□ 0.17
ARHGEF40-208ENST00000557498 SWSAP1Q6NVH7 229 aa16.11■□□□□ 0.17
ARHGEF40-208ENST00000557498 CCDC65Q8IXS2 484 aa16.11■□□□□ 0.17
ARHGEF40-208ENST00000557498 SMYD4Q8IYR2 804 aaPredicted RBP16.11■□□□□ 0.17
ARHGEF40-208ENST00000557498 RUSC1Q9BVN2 902 aa16.11■□□□□ 0.17
ARHGEF40-208ENST00000557498 MLXIPQ9HAP2 919 aa16.11■□□□□ 0.17
ARHGEF40-208ENST00000557498 ANKEF1Q9NU02 776 aa16.11■□□□□ 0.17
ARHGEF40-208ENST00000557498 KCND2Q9NZV8 630 aa16.11■□□□□ 0.17
ARHGEF40-208ENST00000557498 GDAQ9Y2T3 454 aa16.11■□□□□ 0.17
ARHGEF40-208ENST00000557498 IGKV6D-21A0A0A0MT36 114 aa16.1■□□□□ 0.17
ARHGEF40-208ENST00000557498 FRMD3A2A2Y4 597 aa16.1■□□□□ 0.17
ARHGEF40-208ENST00000557498 SMTNL1A8MU46 457 aa16.1■□□□□ 0.17
ARHGEF40-208ENST00000557498 BECN2A8MW95 431 aa16.1■□□□□ 0.17
ARHGEF40-208ENST00000557498 PPP1R3GB7ZBB8 358 aa16.1■□□□□ 0.17
ARHGEF40-208ENST00000557498 GOLGA6L19H0YKK7 550 aa16.1■□□□□ 0.17
ARHGEF40-208ENST00000557498 BACH1O14867 736 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms