RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 A0A087X0T9 212 aa17.85■□□□□ 0.45
SHMT2-232ENST00000557487 GPR75-ASB3A0A0A6YYF3 556 aa17.85■□□□□ 0.45
SHMT2-232ENST00000557487 POTEMA6NI47 508 aa17.85■□□□□ 0.45
SHMT2-232ENST00000557487 RAD51CO43502 376 aa17.85■□□□□ 0.45
SHMT2-232ENST00000557487 KIF4AO95239 1232 aa17.85■□□□□ 0.45
SHMT2-232ENST00000557487 TDP2O95551 362 aa17.85■□□□□ 0.45
SHMT2-232ENST00000557487 FAM228BP0C875 321 aa17.85■□□□□ 0.45
SHMT2-232ENST00000557487 RFC4P35249 363 aa17.85■□□□□ 0.45
SHMT2-232ENST00000557487 FNTAP49354 379 aa17.85■□□□□ 0.45
SHMT2-232ENST00000557487 ATP2B2Q01814 1243 aa17.85■□□□□ 0.45
SHMT2-232ENST00000557487 LRRC41Q15345 812 aa17.85■□□□□ 0.45
SHMT2-232ENST00000557487 NLRP14Q86W24 1093 aa17.85■□□□□ 0.45
SHMT2-232ENST00000557487 NBPF5PQ86XG9 351 aaPredicted RBP17.85■□□□□ 0.45
SHMT2-232ENST00000557487 MAPKAPK5Q8IW41 473 aa17.85■□□□□ 0.45
SHMT2-232ENST00000557487 MYCBPAPQ8TBZ2 947 aa17.85■□□□□ 0.45
SHMT2-232ENST00000557487 NCAPGQ9BPX3 1015 aa17.85■□□□□ 0.45
SHMT2-232ENST00000557487 TACO1Q9BSH4 297 aaKnown RBP17.85■□□□□ 0.45
SHMT2-232ENST00000557487 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.85■□□□□ 0.45
SHMT2-232ENST00000557487 NARFQ9UHQ1 456 aa17.85■□□□□ 0.45
SHMT2-232ENST00000557487 INTUQ9ULD6 942 aa17.85■□□□□ 0.45
SHMT2-232ENST00000557487 PLAAQ9Y263 795 aa17.85■□□□□ 0.45
SHMT2-232ENST00000557487 A0A0A6YYK5 440 aaPredicted RBP17.84■□□□□ 0.45
SHMT2-232ENST00000557487 CETN3O15182 167 aa17.84■□□□□ 0.45
SHMT2-232ENST00000557487 PDHBP11177 359 aa17.84■□□□□ 0.45
SHMT2-232ENST00000557487 GUCY2FP51841 1108 aa17.84■□□□□ 0.45
SHMT2-232ENST00000557487 SPDYCQ5MJ68 293 aa17.84■□□□□ 0.45
SHMT2-232ENST00000557487 AGBL2Q5U5Z8 902 aa17.84■□□□□ 0.45
SHMT2-232ENST00000557487 TTC19Q6DKK2 380 aaPredicted RBP17.84■□□□□ 0.45
SHMT2-232ENST00000557487 MAATS1Q7Z4T9 603 aa17.84■□□□□ 0.45
SHMT2-232ENST00000557487 TXNRD3Q86VQ6 643 aa17.84■□□□□ 0.45
SHMT2-232ENST00000557487 CEP95Q96GE4 821 aa17.84■□□□□ 0.45
SHMT2-232ENST00000557487 CCT8L2Q96SF2 557 aa17.84■□□□□ 0.45
SHMT2-232ENST00000557487 SLITRK6Q9H5Y7 841 aa17.84■□□□□ 0.45
SHMT2-232ENST00000557487 ACTR5Q9H9F9 607 aaPredicted RBP17.84■□□□□ 0.45
SHMT2-232ENST00000557487 FBXL5Q9UKA1 691 aa17.84■□□□□ 0.45
SHMT2-232ENST00000557487 PCDHA2Q9Y5H9 948 aa17.84■□□□□ 0.45
SHMT2-232ENST00000557487 CAPN7Q9Y6W3 813 aa17.84■□□□□ 0.45
SHMT2-232ENST00000557487 H0YHG0 523 aa17.84■□□□□ 0.45
SHMT2-232ENST00000557487 SNHG28P0DPA3 235 aa17.84■□□□□ 0.45
SHMT2-232ENST00000557487 POLD1P28340 1107 aa17.84■□□□□ 0.45
SHMT2-232ENST00000557487 CEP85LQ5SZL2 805 aa17.84■□□□□ 0.45
SHMT2-232ENST00000557487 KCNK18Q7Z418 384 aa17.84■□□□□ 0.45
SHMT2-232ENST00000557487 FRMD5Q7Z6J6 570 aa17.84■□□□□ 0.45
SHMT2-232ENST00000557487 FAM163AQ96GL9 167 aaPredicted RBP17.84■□□□□ 0.45
SHMT2-232ENST00000557487 MXD3Q9BW11 206 aa17.84■□□□□ 0.45
SHMT2-232ENST00000557487 KCTD10Q9H3F6 313 aa17.84■□□□□ 0.45
SHMT2-232ENST00000557487 CPVLQ9H3G5 476 aa17.84■□□□□ 0.45
SHMT2-232ENST00000557487 VAT1LQ9HCJ6 419 aa17.84■□□□□ 0.45
SHMT2-232ENST00000557487 DDX25Q9UHL0 483 aaKnown RBP17.84■□□□□ 0.45
SHMT2-232ENST00000557487 PNMA6FA0A0J9YX94 578 aa17.83■□□□□ 0.44
SHMT2-232ENST00000557487 ESYT3A0FGR9 886 aa17.83■□□□□ 0.44
SHMT2-232ENST00000557487 PGRMC1O00264 195 aaKnown RBP17.83■□□□□ 0.44
SHMT2-232ENST00000557487 EDIL3O43854 480 aa17.83■□□□□ 0.44
SHMT2-232ENST00000557487 GFPT2O94808 682 aa17.83■□□□□ 0.44
SHMT2-232ENST00000557487 PRKCIP41743 596 aa17.83■□□□□ 0.44
SHMT2-232ENST00000557487 BTDP43251 543 aa17.83■□□□□ 0.44
SHMT2-232ENST00000557487 CLK2P49760 499 aaKnown RBP17.83■□□□□ 0.44
SHMT2-232ENST00000557487 MRPL12P52815 198 aaKnown RBP17.83■□□□□ 0.44
SHMT2-232ENST00000557487 NPEPPSP55786 919 aa17.83■□□□□ 0.44
SHMT2-232ENST00000557487 GUCY1A3Q02108 690 aa17.83■□□□□ 0.44
SHMT2-232ENST00000557487 TMC4Q7Z404 712 aa17.83■□□□□ 0.44
SHMT2-232ENST00000557487 VPS36Q86VN1 386 aa17.83■□□□□ 0.44
SHMT2-232ENST00000557487 TAX1BP1Q86VP1 789 aa17.83■□□□□ 0.44
SHMT2-232ENST00000557487 TEX11Q8IYF3 940 aa17.83■□□□□ 0.44
SHMT2-232ENST00000557487 SYCE1Q8N0S2 351 aa17.83■□□□□ 0.44
SHMT2-232ENST00000557487 NLGN1Q8N2Q7 840 aa17.83■□□□□ 0.44
SHMT2-232ENST00000557487 NUDT12Q9BQG2 462 aa17.83■□□□□ 0.44
SHMT2-232ENST00000557487 ADAMTS1Q9UHI8 967 aa17.83■□□□□ 0.44
SHMT2-232ENST00000557487 SAP30BPQ9UHR5 308 aaKnown RBP17.83■□□□□ 0.44
SHMT2-232ENST00000557487 FRMD3A2A2Y4 597 aa17.82■□□□□ 0.44
SHMT2-232ENST00000557487 USP17L5A8MUK1 530 aa17.82■□□□□ 0.44
SHMT2-232ENST00000557487 KCNK3O14649 394 aa17.82■□□□□ 0.44
SHMT2-232ENST00000557487 FLOT1O75955 427 aa17.82■□□□□ 0.44
SHMT2-232ENST00000557487 GYS1P13807 737 aa17.82■□□□□ 0.44
SHMT2-232ENST00000557487 TM4SF1P30408 202 aa17.82■□□□□ 0.44
SHMT2-232ENST00000557487 HLTFQ14527 1009 aaKnown RBP eCLIP17.82■□□□□ 0.44
SHMT2-232ENST00000557487 DIXDC1Q155Q3 683 aa17.82■□□□□ 0.44
SHMT2-232ENST00000557487 PPP2R5EQ16537 467 aa17.82■□□□□ 0.44
SHMT2-232ENST00000557487 BICDL1Q6ZP65 573 aa17.82■□□□□ 0.44
SHMT2-232ENST00000557487 FAM133AQ8N9E0 248 aa17.82■□□□□ 0.44
SHMT2-232ENST00000557487 P3H4Q92791 437 aa17.82■□□□□ 0.44
SHMT2-232ENST00000557487 MYCBPQ99417 103 aaPredicted RBP17.82■□□□□ 0.44
SHMT2-232ENST00000557487 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.82■□□□□ 0.447e-8■■□□□ 13.7
SHMT2-232ENST00000557487 PCDHA12Q9UN75 941 aa17.82■□□□□ 0.44
SHMT2-232ENST00000557487 STK24Q9Y6E0 443 aa17.82■□□□□ 0.44
SHMT2-232ENST00000557487 KIF13BQ9NQT8 1826 aa17.82■□□□□ 0.44
SHMT2-232ENST00000557487 ZSCAN5CA6NGD5 496 aaPredicted RBP17.82■□□□□ 0.44
SHMT2-232ENST00000557487 MARCH6O60337 910 aa17.82■□□□□ 0.44
SHMT2-232ENST00000557487 CDR1P51861 262 aa17.82■□□□□ 0.44
SHMT2-232ENST00000557487 MNAT1P51948 309 aa17.82■□□□□ 0.44
SHMT2-232ENST00000557487 ADAM9Q13443 819 aa17.82■□□□□ 0.44
SHMT2-232ENST00000557487 KCNV1Q6PIU1 500 aa17.82■□□□□ 0.44
SHMT2-232ENST00000557487 LRRC57Q8N9N7 239 aa17.82■□□□□ 0.44
SHMT2-232ENST00000557487 CCDC26Q8TAB7 109 aa17.82■□□□□ 0.44
SHMT2-232ENST00000557487 CUL5Q93034 780 aa17.82■□□□□ 0.44
SHMT2-232ENST00000557487 VCPKMTQ9H867 229 aa17.82■□□□□ 0.44
SHMT2-232ENST00000557487 EMILIN3Q9NT22 766 aa17.82■□□□□ 0.44
SHMT2-232ENST00000557487 H0YGN5 161 aa17.81■□□□□ 0.44
SHMT2-232ENST00000557487 PAEPP09466 180 aa17.81■□□□□ 0.44
SHMT2-232ENST00000557487 HSD17B3P37058 310 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms