RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 ASCC2Q9H1I8 757 aaPredicted RBP9.45□□□□□ -0.9
SYNE3-205ENST00000557275 COPG2Q9UBF2 871 aa9.45□□□□□ -0.9
SYNE3-205ENST00000557275 MIF4GDA9UHW6 222 aaKnown RBP9.45□□□□□ -0.9
SYNE3-205ENST00000557275 TMPRSS15P98073 1019 aa9.45□□□□□ -0.9
SYNE3-205ENST00000557275 MMRN1Q13201 1228 aa9.45□□□□□ -0.9
SYNE3-205ENST00000557275 TSC22D1Q15714 1073 aa9.45□□□□□ -0.9
SYNE3-205ENST00000557275 DNAL1Q4LDG9 190 aa9.45□□□□□ -0.9
SYNE3-205ENST00000557275 DZIP3Q86Y13 1208 aaKnown RBP9.45□□□□□ -0.9
SYNE3-205ENST00000557275 GEMIN8Q9NWZ8 242 aaKnown RBP9.45□□□□□ -0.9
SYNE3-205ENST00000557275 ABCC12Q96J65 1359 aa9.45□□□□□ -0.9
SYNE3-205ENST00000557275 IFNAR2P48551 515 aa9.45□□□□□ -0.9
SYNE3-205ENST00000557275 ZNF174Q15697 407 aa9.45□□□□□ -0.9
SYNE3-205ENST00000557275 C1orf228Q6PIY5 440 aa9.45□□□□□ -0.9
SYNE3-205ENST00000557275 KSR2Q6VAB6 950 aa9.45□□□□□ -0.9
SYNE3-205ENST00000557275 PIK3AP1Q6ZUJ8 805 aa9.45□□□□□ -0.9
SYNE3-205ENST00000557275 KCTD6Q8NC69 237 aa9.45□□□□□ -0.9
SYNE3-205ENST00000557275 DHTKD1Q96HY7 919 aaPredicted RBP9.45□□□□□ -0.9
SYNE3-205ENST00000557275 ATP8A1Q9Y2Q0 1164 aa9.45□□□□□ -0.9
SYNE3-205ENST00000557275 NNTQ13423 1086 aa9.44□□□□□ -0.9
SYNE3-205ENST00000557275 SLC12A1Q13621 1099 aa9.44□□□□□ -0.9
SYNE3-205ENST00000557275 TAB1Q15750 504 aa9.44□□□□□ -0.9
SYNE3-205ENST00000557275 ZFYVE19Q96K21 471 aa9.44□□□□□ -0.9
SYNE3-205ENST00000557275 DR1Q01658 176 aa9.44□□□□□ -0.9
SYNE3-205ENST00000557275 INAQ16352 499 aa9.44□□□□□ -0.9
SYNE3-205ENST00000557275 BBS7Q8IWZ6 715 aa9.44□□□□□ -0.9
SYNE3-205ENST00000557275 COQ7Q99807 217 aa9.44□□□□□ -0.9
SYNE3-205ENST00000557275 SCYL2Q6P3W7 929 aa9.44□□□□□ -0.9
SYNE3-205ENST00000557275 SCFD1Q8WVM8 642 aa9.44□□□□□ -0.9
SYNE3-205ENST00000557275 CASP10Q92851 521 aa9.44□□□□□ -0.9
SYNE3-205ENST00000557275 TAB2Q9NYJ8 693 aa9.44□□□□□ -0.9
SYNE3-205ENST00000557275 TBKBP1A7MCY6 615 aa9.44□□□□□ -0.9
SYNE3-205ENST00000557275 NLRP11P59045 1033 aaKnown RBP9.44□□□□□ -0.9
SYNE3-205ENST00000557275 ATP8B2P98198 1209 aa9.44□□□□□ -0.9
SYNE3-205ENST00000557275 FGD2Q7Z6J4 655 aa9.44□□□□□ -0.9
SYNE3-205ENST00000557275 NT5C1BQ96P26 610 aa9.44□□□□□ -0.9
SYNE3-205ENST00000557275 XPO4Q9C0E2 1151 aaKnown RBP9.44□□□□□ -0.9
SYNE3-205ENST00000557275 SUPT3HO75486 399 aa9.44□□□□□ -0.9
SYNE3-205ENST00000557275 MAPK4P31152 587 aa9.44□□□□□ -0.9
SYNE3-205ENST00000557275 ARL4CP56559 192 aa9.44□□□□□ -0.9
SYNE3-205ENST00000557275 RASGRF1Q13972 1273 aa9.44□□□□□ -0.9
SYNE3-205ENST00000557275 CTTNQ14247 550 aaKnown RBP9.44□□□□□ -0.9
SYNE3-205ENST00000557275 PRG4Q92954 1404 aaPredicted RBP9.44□□□□□ -0.9
SYNE3-205ENST00000557275 SOX5P35711 763 aa9.44□□□□□ -0.9
SYNE3-205ENST00000557275 CLEC11AQ9Y240 323 aa9.44□□□□□ -0.9
SYNE3-205ENST00000557275 PTPN22Q9Y2R2 807 aa9.44□□□□□ -0.9
SYNE3-205ENST00000557275 hCG_1984214I3L0E3 225 aa9.44□□□□□ -0.9
SYNE3-205ENST00000557275 TBC1D10BQ4KMP7 808 aaPredicted RBP9.44□□□□□ -0.9
SYNE3-205ENST00000557275 TRMT44Q8IYL2 757 aaKnown RBP9.44□□□□□ -0.9
SYNE3-205ENST00000557275 PANX2Q96RD6 677 aa9.44□□□□□ -0.9
SYNE3-205ENST00000557275 COPEO14579 308 aa9.44□□□□□ -0.9
SYNE3-205ENST00000557275 GRM1Q13255 1194 aa9.44□□□□□ -0.9
SYNE3-205ENST00000557275 FAM160B1Q5W0V3 765 aa9.44□□□□□ -0.9
SYNE3-205ENST00000557275 EPM2AIP1Q7L775 607 aaPredicted RBP9.44□□□□□ -0.9
SYNE3-205ENST00000557275 CCDC103Q8IW40 242 aa9.44□□□□□ -0.9
SYNE3-205ENST00000557275 FLCNQ8NFG4 579 aa9.44□□□□□ -0.9
SYNE3-205ENST00000557275 RUBCNLQ9H714 662 aa9.44□□□□□ -0.9
SYNE3-205ENST00000557275 LAMC3Q9Y6N6 1575 aa9.44□□□□□ -0.9
SYNE3-205ENST00000557275 ZSCAN9O15535 394 aaPredicted RBP9.44□□□□□ -0.9
SYNE3-205ENST00000557275 MMS19Q96T76 1030 aa9.44□□□□□ -0.9
SYNE3-205ENST00000557275 PACSIN1Q9BY11 444 aa9.44□□□□□ -0.9
SYNE3-205ENST00000557275 POLKQ9UBT6 870 aa9.44□□□□□ -0.9
SYNE3-205ENST00000557275 CLK1P49759 484 aaKnown RBP9.44□□□□□ -0.9
SYNE3-205ENST00000557275 TRIM16LQ309B1 348 aa9.44□□□□□ -0.9
SYNE3-205ENST00000557275 SETD3Q86TU7 594 aaPredicted RBP9.44□□□□□ -0.9
SYNE3-205ENST00000557275 UBAP1Q9NZ09 502 aa9.44□□□□□ -0.9
SYNE3-205ENST00000557275 HIC1Q14526 733 aa9.44□□□□□ -0.9
SYNE3-205ENST00000557275 SPATA1Q5VX52 437 aa9.44□□□□□ -0.9
SYNE3-205ENST00000557275 GPBP1Q86WP2 473 aa9.44□□□□□ -0.9
SYNE3-205ENST00000557275 SYCP2Q9BX26 1530 aa9.44□□□□□ -0.9
SYNE3-205ENST00000557275 PJA2O43164 708 aa9.43□□□□□ -0.9
SYNE3-205ENST00000557275 PLEKHA8Q96JA3 519 aa9.43□□□□□ -0.9
SYNE3-205ENST00000557275 GTPBP6O43824 516 aaPredicted RBP9.43□□□□□ -0.9
SYNE3-205ENST00000557275 ADAMTS2O95450 1211 aa9.43□□□□□ -0.9
SYNE3-205ENST00000557275 PLA2G4DQ86XP0 818 aa9.43□□□□□ -0.9
SYNE3-205ENST00000557275 TTLL11Q8NHH1 800 aa9.43□□□□□ -0.9
SYNE3-205ENST00000557275 B4GALNT2Q8NHY0 566 aa9.43□□□□□ -0.9
SYNE3-205ENST00000557275 CHURC1Q8WUH1 139 aa9.43□□□□□ -0.9
SYNE3-205ENST00000557275 LARP4BQ92615 738 aaKnown RBP9.43□□□□□ -0.9
SYNE3-205ENST00000557275 RBM41Q96IZ5 413 aaKnown RBP9.43□□□□□ -0.9
SYNE3-205ENST00000557275 ZNF215Q9UL58 517 aaPredicted RBP9.43□□□□□ -0.9
SYNE3-205ENST00000557275 TUBGCP2Q9BSJ2 902 aa9.43□□□□□ -0.9
SYNE3-205ENST00000557275 PDP2Q9P2J9 529 aa9.43□□□□□ -0.9
SYNE3-205ENST00000557275 HOXC8P31273 242 aa9.43□□□□□ -0.9
SYNE3-205ENST00000557275 KCTD16Q68DU8 428 aa9.43□□□□□ -0.9
SYNE3-205ENST00000557275 ZNF544Q6NX49 715 aa9.43□□□□□ -0.9
SYNE3-205ENST00000557275 PPM1KQ8N3J5 372 aa9.43□□□□□ -0.9
SYNE3-205ENST00000557275 FSD1LQ9BXM9 530 aa9.43□□□□□ -0.9
SYNE3-205ENST00000557275 TUFT1Q9NNX1 390 aa9.43□□□□□ -0.9
SYNE3-205ENST00000557275 BABAM1Q9NWV8 329 aa9.43□□□□□ -0.9
SYNE3-205ENST00000557275 CFAP74Q9C0B2 1584 aa9.43□□□□□ -0.9
SYNE3-205ENST00000557275 TALDO1P37837 337 aa9.43□□□□□ -0.9
SYNE3-205ENST00000557275 CATSPER3Q86XQ3 398 aa9.43□□□□□ -0.9
SYNE3-205ENST00000557275 SMARCAD1Q9H4L7 1026 aa9.43□□□□□ -0.9
SYNE3-205ENST00000557275 SNRKQ9NRH2 765 aa9.43□□□□□ -0.9
SYNE3-205ENST00000557275 DISC1Q9NRI5 854 aa9.43□□□□□ -0.9
SYNE3-205ENST00000557275 SCN3BQ9NY72 215 aa9.43□□□□□ -0.9
SYNE3-205ENST00000557275 ENOPH1Q9UHY7 261 aa9.43□□□□□ -0.9
SYNE3-205ENST00000557275 ZSCAN20P17040 1043 aaPredicted RBP9.43□□□□□ -0.9
SYNE3-205ENST00000557275 SERPINH1P50454 418 aaKnown RBP9.43□□□□□ -0.9
SYNE3-205ENST00000557275 ERICH1Q86X53 443 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms