RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 ADGRF4Q8IZF3 695 aa10.09□□□□□ -0.79
VRK1-206ENST00000557222 PPTC7Q8NI37 304 aa10.09□□□□□ -0.79
VRK1-206ENST00000557222 ADAM32Q8TC27 787 aa10.09□□□□□ -0.79
VRK1-206ENST00000557222 KAT2BQ92831 832 aa10.09□□□□□ -0.79
VRK1-206ENST00000557222 TAAR1Q96RJ0 339 aa10.09□□□□□ -0.79
VRK1-206ENST00000557222 CTAGE1Q96RT6 745 aa10.09□□□□□ -0.79
VRK1-206ENST00000557222 ZSCAN10Q96SZ4 725 aaPredicted RBP10.09□□□□□ -0.79
VRK1-206ENST00000557222 RAD9AQ99638 391 aa10.09□□□□□ -0.79
VRK1-206ENST00000557222 DSCC1Q9BVC3 393 aa10.09□□□□□ -0.79
VRK1-206ENST00000557222 GTF2IRD1Q9UHL9 959 aa10.09□□□□□ -0.79
VRK1-206ENST00000557222 CTNNA3Q9UI47 895 aa10.09□□□□□ -0.79
VRK1-206ENST00000557222 DDX41Q9UJV9 622 aaKnown RBP10.09□□□□□ -0.79
VRK1-206ENST00000557222 PIEZO1Q92508 2521 aa10.09□□□□□ -0.79
VRK1-206ENST00000557222 TANC1Q9C0D5 1861 aa10.08□□□□□ -0.8
VRK1-206ENST00000557222 HAS3O00219 553 aa10.08□□□□□ -0.8
VRK1-206ENST00000557222 WFS1O76024 890 aa10.08□□□□□ -0.8
VRK1-206ENST00000557222 F2P00734 622 aa10.08□□□□□ -0.8
VRK1-206ENST00000557222 PARP1P09874 1014 aaKnown RBP10.08□□□□□ -0.8
VRK1-206ENST00000557222 GOLGA8HP0CJ92 632 aa10.08□□□□□ -0.8
VRK1-206ENST00000557222 TGFB3P10600 412 aa10.08□□□□□ -0.8
VRK1-206ENST00000557222 WDR5P61964 334 aaKnown RBP10.08□□□□□ -0.8
VRK1-206ENST00000557222 PTK7Q13308 1070 aa10.08□□□□□ -0.8
VRK1-206ENST00000557222 GPNMBQ14956 572 aa10.08□□□□□ -0.8
VRK1-206ENST00000557222 LY6KQ17RY6 165 aa10.08□□□□□ -0.8
VRK1-206ENST00000557222 ARHGEF16Q5VV41 709 aa10.08□□□□□ -0.8
VRK1-206ENST00000557222 SEPT14Q6ZU15 432 aa10.08□□□□□ -0.8
VRK1-206ENST00000557222 LRRC8DQ7L1W4 858 aa10.08□□□□□ -0.8
VRK1-206ENST00000557222 SMC5Q8IY18 1101 aa10.08□□□□□ -0.8
VRK1-206ENST00000557222 MICALL1Q8N3F8 863 aa10.08□□□□□ -0.8
VRK1-206ENST00000557222 C7orf31Q8N865 590 aa10.08□□□□□ -0.8
VRK1-206ENST00000557222 ARNTL2Q8WYA1 636 aa10.08□□□□□ -0.8
VRK1-206ENST00000557222 TBC1D5Q92609 795 aa10.08□□□□□ -0.8
VRK1-206ENST00000557222 RILPL2Q969X0 211 aa10.08□□□□□ -0.8
VRK1-206ENST00000557222 KCTD15Q96SI1 283 aaPredicted RBP10.08□□□□□ -0.8
VRK1-206ENST00000557222 KRT23Q9C075 422 aa10.08□□□□□ -0.8
VRK1-206ENST00000557222 RWDD1Q9H446 243 aaPredicted RBP10.08□□□□□ -0.8
VRK1-206ENST00000557222 CNNM2Q9H8M5 875 aa10.08□□□□□ -0.8
VRK1-206ENST00000557222 JMJD4Q9H9V9 463 aa10.08□□□□□ -0.8
VRK1-206ENST00000557222 PXMP2Q9NR77 195 aa10.08□□□□□ -0.8
VRK1-206ENST00000557222 ZSWIM5Q9P217 1185 aa10.08□□□□□ -0.8
VRK1-206ENST00000557222 CDV3Q9UKY7 258 aaKnown RBP10.08□□□□□ -0.8
VRK1-206ENST00000557222 NEDD4P46934 1319 aa10.07□□□□□ -0.8
VRK1-206ENST00000557222 KIAA1217Q5T5P2 1943 aa10.07□□□□□ -0.8
VRK1-206ENST00000557222 EPOPA6NHQ4 379 aa10.07□□□□□ -0.8
VRK1-206ENST00000557222 RFXAPO00287 272 aa10.07□□□□□ -0.8
VRK1-206ENST00000557222 LPXNO60711 386 aa10.07□□□□□ -0.8
VRK1-206ENST00000557222 GJB5O95377 273 aa10.07□□□□□ -0.8
VRK1-206ENST00000557222 CKBP12277 381 aa10.07□□□□□ -0.8
VRK1-206ENST00000557222 HSD17B4P51659 736 aa10.07□□□□□ -0.8
VRK1-206ENST00000557222 ERVK-21P61565 698 aa10.07□□□□□ -0.8
VRK1-206ENST00000557222 TFF2Q03403 129 aa10.07□□□□□ -0.8
VRK1-206ENST00000557222 GRB10Q13322 594 aa10.07□□□□□ -0.8
VRK1-206ENST00000557222 IKBKEQ14164 716 aa10.07□□□□□ -0.8
VRK1-206ENST00000557222 IMMTQ16891 758 aaKnown RBP10.07□□□□□ -0.8
VRK1-206ENST00000557222 QRICH1Q2TAL8 776 aa10.07□□□□□ -0.8
VRK1-206ENST00000557222 STOX1Q6ZVD7 989 aa10.07□□□□□ -0.8
VRK1-206ENST00000557222 DHX37Q8IY37 1157 aaKnown RBP10.07□□□□□ -0.8
VRK1-206ENST00000557222 ENAHQ8N8S7 591 aaPredicted RBP10.07□□□□□ -0.8
VRK1-206ENST00000557222 DHX38Q92620 1227 aaKnown RBP10.07□□□□□ -0.8
VRK1-206ENST00000557222 MTMR8Q96EF0 704 aa10.07□□□□□ -0.8
VRK1-206ENST00000557222 CRBNQ96SW2 442 aa10.07□□□□□ -0.8
VRK1-206ENST00000557222 ZKSCAN3Q9BRR0 538 aa10.07□□□□□ -0.8
VRK1-206ENST00000557222 AMNQ9BXJ7 453 aa10.07□□□□□ -0.8
VRK1-206ENST00000557222 LNPKQ9C0E8 428 aa10.07□□□□□ -0.8
VRK1-206ENST00000557222 COL20A1Q9P218 1284 aa10.07□□□□□ -0.8
VRK1-206ENST00000557222 HDAC6Q9UBN7 1215 aa10.07□□□□□ -0.8
VRK1-206ENST00000557222 EMSYQ7Z589 1322 aa10.07□□□□□ -0.8
VRK1-206ENST00000557222 TCF20Q9UGU0 1960 aaKnown RBP10.06□□□□□ -0.8
VRK1-206ENST00000557222 TERTO14746 1132 aaKnown RBP10.06□□□□□ -0.8
VRK1-206ENST00000557222 NBNO60934 754 aa10.06□□□□□ -0.8
VRK1-206ENST00000557222 KIAA0753Q2KHM9 967 aa10.06□□□□□ -0.8
VRK1-206ENST00000557222 TRIM71Q2Q1W2 868 aaKnown RBP10.06□□□□□ -0.8
VRK1-206ENST00000557222 PPP1R26Q5T8A7 1209 aaPredicted RBP10.06□□□□□ -0.8
VRK1-206ENST00000557222 VSIG10LQ86VR7 867 aa10.06□□□□□ -0.8
VRK1-206ENST00000557222 CHD1LQ86WJ1 897 aa10.06□□□□□ -0.8
VRK1-206ENST00000557222 PLEKHM2Q8IWE5 1019 aa10.06□□□□□ -0.8
VRK1-206ENST00000557222 MEIOBQ8N635 442 aa10.06□□□□□ -0.8
VRK1-206ENST00000557222 TGS1Q96RS0 853 aaKnown RBP10.06□□□□□ -0.8
VRK1-206ENST00000557222 UBAC1Q9BSL1 405 aa10.06□□□□□ -0.8
VRK1-206ENST00000557222 CPVLQ9H3G5 476 aa10.06□□□□□ -0.8
VRK1-206ENST00000557222 CERS4Q9HA82 394 aa10.06□□□□□ -0.8
VRK1-206ENST00000557222 DIAPH3Q9NSV4 1193 aa10.06□□□□□ -0.8
VRK1-206ENST00000557222 MRVI1Q9Y6F6 885 aa10.06□□□□□ -0.8
VRK1-206ENST00000557222 B4E1Z4 1266 aa10.05□□□□□ -0.8
VRK1-206ENST00000557222 KLRF2D3W0D1 207 aa10.05□□□□□ -0.8
VRK1-206ENST00000557222 ZBTB5O15062 677 aa10.05□□□□□ -0.8
VRK1-206ENST00000557222 DHX16O60231 1041 aaKnown RBP10.05□□□□□ -0.8
VRK1-206ENST00000557222 CAND2O75155 1236 aa10.05□□□□□ -0.8
VRK1-206ENST00000557222 LGR5O75473 907 aa10.05□□□□□ -0.8
VRK1-206ENST00000557222 ARHGEF15O94989 841 aa10.05□□□□□ -0.8
VRK1-206ENST00000557222 CFBP00751 764 aa10.05□□□□□ -0.8
VRK1-206ENST00000557222 EIF2AK2P19525 551 aaKnown RBP10.05□□□□□ -0.8
VRK1-206ENST00000557222 PLA2G5P39877 138 aa10.05□□□□□ -0.8
VRK1-206ENST00000557222 KCNQ1P51787 676 aa10.05□□□□□ -0.8
VRK1-206ENST00000557222 NUCB1Q02818 461 aa10.05□□□□□ -0.8
VRK1-206ENST00000557222 CELF3Q5SZQ8 465 aaKnown RBP10.05□□□□□ -0.8
VRK1-206ENST00000557222 IFIT1BQ5T764 474 aaKnown RBP10.05□□□□□ -0.8
VRK1-206ENST00000557222 CWC27Q6UX04 472 aaKnown RBP10.05□□□□□ -0.8
VRK1-206ENST00000557222 CHST3Q7LGC8 479 aa10.05□□□□□ -0.8
VRK1-206ENST00000557222 SAMD11Q96NU1 681 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms