RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 TRMT44Q8IYL2 757 aaKnown RBP12.92□□□□□ -0.34
NEK9-210ENST00000557026 TMEM35BQ8NCS4 154 aa12.92□□□□□ -0.34
NEK9-210ENST00000557026 AGBL3Q8NEM8 1001 aa12.92□□□□□ -0.34
NEK9-210ENST00000557026 BLZF1Q9H2G9 400 aa12.92□□□□□ -0.34
NEK9-210ENST00000557026 PIDD1Q9HB75 910 aa12.92□□□□□ -0.34
NEK9-210ENST00000557026 PALD1Q9ULE6 856 aa12.92□□□□□ -0.34
NEK9-210ENST00000557026 CCDC151A5D8V7 595 aa12.92□□□□□ -0.34
NEK9-210ENST00000557026 ORC4O43929 436 aa12.92□□□□□ -0.34
NEK9-210ENST00000557026 GH2P01242 217 aa12.92□□□□□ -0.34
NEK9-210ENST00000557026 PLA2G4BP0C869 781 aa12.92□□□□□ -0.34
NEK9-210ENST00000557026 RALAP11233 206 aa12.92□□□□□ -0.34
NEK9-210ENST00000557026 CDC25BP30305 580 aa12.92□□□□□ -0.34
NEK9-210ENST00000557026 STAT3P40763 770 aa12.92□□□□□ -0.34
NEK9-210ENST00000557026 SNRPFP62306 86 aaKnown RBP12.92□□□□□ -0.34
NEK9-210ENST00000557026 PTPN12Q05209 780 aaKnown RBP12.92□□□□□ -0.34
NEK9-210ENST00000557026 LRMPQ12912 555 aa12.92□□□□□ -0.34
NEK9-210ENST00000557026 PHLDB3Q6NSJ2 640 aa12.92□□□□□ -0.34
NEK9-210ENST00000557026 HHIPL2Q6UWX4 724 aa12.92□□□□□ -0.34
NEK9-210ENST00000557026 KCTD1Q719H9 257 aa12.92□□□□□ -0.34
NEK9-210ENST00000557026 ZNF579Q8NAF0 562 aaKnown RBP12.92□□□□□ -0.34
NEK9-210ENST00000557026 RSRC1Q96IZ7 334 aaKnown RBP12.92□□□□□ -0.34
NEK9-210ENST00000557026 CNOT6LQ96LI5 555 aaKnown RBP12.92□□□□□ -0.34
NEK9-210ENST00000557026 SEC31BQ9NQW1 1179 aa12.92□□□□□ -0.34
NEK9-210ENST00000557026 ZNF302Q9NR11 478 aa12.92□□□□□ -0.34
NEK9-210ENST00000557026 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.92□□□□□ -0.34
NEK9-210ENST00000557026 MINPP1Q9UNW1 487 aa12.92□□□□□ -0.34
NEK9-210ENST00000557026 UBN2Q6ZU65 1347 aa12.92□□□□□ -0.34
NEK9-210ENST00000557026 IQGAP3Q86VI3 1631 aa12.92□□□□□ -0.34
NEK9-210ENST00000557026 PSMC5P62195 406 aa12.92□□□□□ -0.34
NEK9-210ENST00000557026 SNRNP48Q6IEG0 339 aaKnown RBP12.92□□□□□ -0.34
NEK9-210ENST00000557026 TBC1D19Q8N5T2 526 aa12.92□□□□□ -0.34
NEK9-210ENST00000557026 CCDC124Q96CT7 223 aaKnown RBP12.92□□□□□ -0.34
NEK9-210ENST00000557026 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.92□□□□□ -0.34
NEK9-210ENST00000557026 LSG1Q9H089 658 aaKnown RBP12.92□□□□□ -0.34
NEK9-210ENST00000557026 EMILIN3Q9NT22 766 aa12.92□□□□□ -0.34
NEK9-210ENST00000557026 KDM1AO60341 852 aa12.91□□□□□ -0.34
NEK9-210ENST00000557026 TMCC1O94876 653 aa12.91□□□□□ -0.34
NEK9-210ENST00000557026 KIAA1755Q5JYT7 1200 aa12.91□□□□□ -0.34
NEK9-210ENST00000557026 PARD3BQ8TEW8 1205 aa12.91□□□□□ -0.34
NEK9-210ENST00000557026 SCG3Q8WXD2 468 aaKnown RBP12.91□□□□□ -0.34
NEK9-210ENST00000557026 GJA10Q969M2 543 aa12.91□□□□□ -0.34
NEK9-210ENST00000557026 SCYL1Q96KG9 808 aa12.91□□□□□ -0.34
NEK9-210ENST00000557026 TRERF1Q96PN7 1200 aa12.91□□□□□ -0.34
NEK9-210ENST00000557026 TUBGCP2Q9BSJ2 902 aa12.91□□□□□ -0.34
NEK9-210ENST00000557026 ISCA1Q9BUE6 129 aa12.91□□□□□ -0.34
NEK9-210ENST00000557026 MRPL4Q9BYD3 311 aaKnown RBP12.91□□□□□ -0.34
NEK9-210ENST00000557026 CNTNAP4Q9C0A0 1308 aa12.91□□□□□ -0.34
NEK9-210ENST00000557026 INHBAP08476 426 aa12.91□□□□□ -0.34
NEK9-210ENST00000557026 SEPT6Q14141 434 aa12.91□□□□□ -0.34
NEK9-210ENST00000557026 FAM71BQ8TC56 605 aa12.91□□□□□ -0.34
NEK9-210ENST00000557026 MTRQ99707 1265 aa12.91□□□□□ -0.34
NEK9-210ENST00000557026 OSBPL5Q9H0X9 879 aaPredicted RBP12.91□□□□□ -0.34
NEK9-210ENST00000557026 NFU1Q9UMS0 254 aa12.91□□□□□ -0.34
NEK9-210ENST00000557026 HOXA2O43364 376 aa12.91□□□□□ -0.34
NEK9-210ENST00000557026 TTC4O95801 387 aa12.91□□□□□ -0.34
NEK9-210ENST00000557026 CYP4A11Q02928 519 aa12.91□□□□□ -0.34
NEK9-210ENST00000557026 SPICE1Q8N0Z3 855 aa12.91□□□□□ -0.34
NEK9-210ENST00000557026 RBM41Q96IZ5 413 aaKnown RBP12.91□□□□□ -0.34
NEK9-210ENST00000557026 KCND2Q9NZV8 630 aa12.91□□□□□ -0.34
NEK9-210ENST00000557026 TLK1Q9UKI8 766 aa12.91□□□□□ -0.34
NEK9-210ENST00000557026 MIF4GDA9UHW6 222 aaKnown RBP12.91□□□□□ -0.34
NEK9-210ENST00000557026 CYBBP04839 570 aa12.91□□□□□ -0.34
NEK9-210ENST00000557026 ADORA1P30542 326 aa12.91□□□□□ -0.34
NEK9-210ENST00000557026 COG2Q14746 738 aa12.91□□□□□ -0.34
NEK9-210ENST00000557026 SLC10A5Q5PT55 438 aa12.91□□□□□ -0.34
NEK9-210ENST00000557026 CHST13Q8NET6 341 aa12.91□□□□□ -0.34
NEK9-210ENST00000557026 KIF3CO14782 793 aa12.9□□□□□ -0.34
NEK9-210ENST00000557026 CLDN3O15551 220 aa12.9□□□□□ -0.34
NEK9-210ENST00000557026 MYBL1P10243 752 aa12.9□□□□□ -0.34
NEK9-210ENST00000557026 CPA1P15085 419 aa12.9□□□□□ -0.34
NEK9-210ENST00000557026 ZFXP17010 805 aaPredicted RBP12.9□□□□□ -0.34
NEK9-210ENST00000557026 SF3B3Q15393 1217 aaKnown RBP12.9□□□□□ -0.34
NEK9-210ENST00000557026 TAF1CQ15572 869 aaPredicted RBP12.9□□□□□ -0.34
NEK9-210ENST00000557026 KRT71Q3SY84 523 aa12.9□□□□□ -0.34
NEK9-210ENST00000557026 GANCQ8TET4 914 aa12.9□□□□□ -0.34
NEK9-210ENST00000557026 ARHGEF1Q92888 912 aaKnown RBP12.9□□□□□ -0.34
NEK9-210ENST00000557026 SLC38A7Q9NVC3 462 aa12.9□□□□□ -0.34
NEK9-210ENST00000557026 ASNSD1Q9NWL6 643 aa12.9□□□□□ -0.34
NEK9-210ENST00000557026 OGFRQ9NZT2 677 aa12.9□□□□□ -0.34
NEK9-210ENST00000557026 KLHL14Q9P2G3 628 aa12.9□□□□□ -0.34
NEK9-210ENST00000557026 PNPLA7Q6ZV29 1317 aa12.9□□□□□ -0.34
NEK9-210ENST00000557026 PRDM15P57071 1507 aaPredicted RBP12.9□□□□□ -0.34
NEK9-210ENST00000557026 GOLGA8JA6NMD2 632 aa12.9□□□□□ -0.34
NEK9-210ENST00000557026 JAK2O60674 1132 aa12.9□□□□□ -0.34
NEK9-210ENST00000557026 CPP00450 1065 aa12.9□□□□□ -0.34
NEK9-210ENST00000557026 SLMAPQ14BN4 828 aa12.9□□□□□ -0.34
NEK9-210ENST00000557026 PCGF5Q86SE9 256 aa12.9□□□□□ -0.34
NEK9-210ENST00000557026 LCORLQ8N3X6 602 aa12.9□□□□□ -0.34
NEK9-210ENST00000557026 RDM1Q8NG50 284 aa12.9□□□□□ -0.34
NEK9-210ENST00000557026 ZNF653Q96CK0 615 aa12.9□□□□□ -0.34
NEK9-210ENST00000557026 TNIP3Q96KP6 325 aa12.9□□□□□ -0.34
NEK9-210ENST00000557026 SRP68Q9UHB9 627 aaKnown RBP12.9□□□□□ -0.34
NEK9-210ENST00000557026 LMTK2Q8IWU2 1503 aa12.9□□□□□ -0.34
NEK9-210ENST00000557026 RRN3P2A6NIE6 340 aa12.9□□□□□ -0.34
NEK9-210ENST00000557026 GAS2O43903 313 aaKnown RBP12.9□□□□□ -0.34
NEK9-210ENST00000557026 RASGRF1Q13972 1273 aa12.9□□□□□ -0.34
NEK9-210ENST00000557026 KRT33BQ14525 404 aa12.9□□□□□ -0.34
NEK9-210ENST00000557026 TWF2Q6IBS0 349 aaKnown RBP12.9□□□□□ -0.34
NEK9-210ENST00000557026 TMTC3Q6ZXV5 915 aa12.9□□□□□ -0.34
NEK9-210ENST00000557026 OTUD7AQ8TE49 926 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms