RNA–Protein interactions for RNA: ENST00000556909.1

VIPAS39-209, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-209ENST00000556909 ARIH1Q9Y4X5 557 aaPredicted RBP20.99■□□□□ 0.95
VIPAS39-209ENST00000556909 SLC27A2O14975 620 aa20.98■□□□□ 0.95
VIPAS39-209ENST00000556909 SSTR3P32745 418 aaPredicted RBP20.98■□□□□ 0.95
VIPAS39-209ENST00000556909 FBXO47Q5MNV8 452 aa20.98■□□□□ 0.95
VIPAS39-209ENST00000556909 TMTC3Q6ZXV5 915 aa20.98■□□□□ 0.95
VIPAS39-209ENST00000556909 SMARCAD1Q9H4L7 1026 aa20.98■□□□□ 0.95
VIPAS39-209ENST00000556909 JADE2Q9NQC1 790 aa20.98■□□□□ 0.95
VIPAS39-209ENST00000556909 PCDHA6Q9UN73 950 aa20.98■□□□□ 0.95
VIPAS39-209ENST00000556909 PCDHA8Q9Y5H6 950 aa20.98■□□□□ 0.95
VIPAS39-209ENST00000556909 CDY2AQ9Y6F7 541 aa20.98■□□□□ 0.95
VIPAS39-209ENST00000556909 IRX6P78412 446 aaPredicted RBP20.97■□□□□ 0.95
VIPAS39-209ENST00000556909 TSHZ1Q6ZSZ6 1077 aa20.97■□□□□ 0.95
VIPAS39-209ENST00000556909 HEATR3Q7Z4Q2 680 aa20.97■□□□□ 0.95
VIPAS39-209ENST00000556909 CCDC82Q8N4S0 544 aa20.97■□□□□ 0.95
VIPAS39-209ENST00000556909 ZBTB10Q96DT7 871 aa20.97■□□□□ 0.95
VIPAS39-209ENST00000556909 C11orf84Q9BUA3 381 aaPredicted RBP20.97■□□□□ 0.95
VIPAS39-209ENST00000556909 LRRC2Q9BYS8 371 aa20.97■□□□□ 0.95
VIPAS39-209ENST00000556909 SLC12A7Q9Y666 1083 aa20.97■□□□□ 0.95
VIPAS39-209ENST00000556909 ENPP3O14638 875 aa20.96■□□□□ 0.95
VIPAS39-209ENST00000556909 RB1P06400 928 aa20.96■□□□□ 0.95
VIPAS39-209ENST00000556909 IGBP1P78318 339 aa20.96■□□□□ 0.95
VIPAS39-209ENST00000556909 MRPS6P82932 125 aaKnown RBP20.96■□□□□ 0.95
VIPAS39-209ENST00000556909 CREB3L3Q68CJ9 461 aa20.96■□□□□ 0.95
VIPAS39-209ENST00000556909 EP400NLQ6ZTU2 488 aa20.96■□□□□ 0.95
VIPAS39-209ENST00000556909 MICU3Q86XE3 530 aa20.96■□□□□ 0.95
VIPAS39-209ENST00000556909 FANCBQ8NB91 859 aa20.96■□□□□ 0.95
VIPAS39-209ENST00000556909 LINC01599Q8WXQ3 324 aa20.96■□□□□ 0.95
VIPAS39-209ENST00000556909 CLP1Q92989 425 aaKnown RBP20.96■□□□□ 0.95
VIPAS39-209ENST00000556909 PCYT2Q99447 389 aa20.96■□□□□ 0.95
VIPAS39-209ENST00000556909 JPH1Q9HDC5 661 aaPredicted RBP20.96■□□□□ 0.95
VIPAS39-209ENST00000556909 CLDND1Q9NY35 253 aa20.96■□□□□ 0.95
VIPAS39-209ENST00000556909 RWDD3Q9Y3V2 267 aa20.96■□□□□ 0.95
VIPAS39-209ENST00000556909 MUC6Q6W4X9 2439 aa20.96■□□□□ 0.95
VIPAS39-209ENST00000556909 GRM6O15303 877 aa20.95■□□□□ 0.94
VIPAS39-209ENST00000556909 MAFGO15525 162 aa20.95■□□□□ 0.94
VIPAS39-209ENST00000556909 BMPR1AP36894 532 aa20.95■□□□□ 0.94
VIPAS39-209ENST00000556909 ZNF689Q96CS4 500 aaPredicted RBP20.95■□□□□ 0.94
VIPAS39-209ENST00000556909 ESYT1Q9BSJ8 1104 aa20.95■□□□□ 0.94
VIPAS39-209ENST00000556909 FAM49AQ9H0Q0 323 aaPredicted RBP20.95■□□□□ 0.94
VIPAS39-209ENST00000556909 LMAN2LQ9H0V9 348 aa20.95■□□□□ 0.94
VIPAS39-209ENST00000556909 AGO3Q9H9G7 860 aaKnown RBP20.95■□□□□ 0.94
VIPAS39-209ENST00000556909 CNTNAP5Q8WYK1 1306 aa20.95■□□□□ 0.94
VIPAS39-209ENST00000556909 RRN3P2A6NIE6 340 aa20.94■□□□□ 0.94
VIPAS39-209ENST00000556909 RPLP2P05387 115 aaKnown RBP20.94■□□□□ 0.94
VIPAS39-209ENST00000556909 INSRRP14616 1297 aa20.94■□□□□ 0.94
VIPAS39-209ENST00000556909 CD52P31358 61 aa20.94■□□□□ 0.94
VIPAS39-209ENST00000556909 BTG3Q14201 252 aaPredicted RBP20.94■□□□□ 0.94
VIPAS39-209ENST00000556909 NECTIN1Q15223 517 aa20.94■□□□□ 0.94
VIPAS39-209ENST00000556909 WWC2Q6AWC2 1192 aa20.94■□□□□ 0.94
VIPAS39-209ENST00000556909 SGMS1Q86VZ5 419 aa20.94■□□□□ 0.94
VIPAS39-209ENST00000556909 KCNH7Q9NS40 1196 aa20.94■□□□□ 0.94
VIPAS39-209ENST00000556909 SLC9A2Q9UBY0 812 aa20.94■□□□□ 0.94
VIPAS39-209ENST00000556909 PLXNA4Q9HCM2 1894 aa20.93■□□□□ 0.94
VIPAS39-209ENST00000556909 DGKIO75912 1065 aa20.93■□□□□ 0.94
VIPAS39-209ENST00000556909 HOXD11P31277 338 aaPredicted RBP20.93■□□□□ 0.94
VIPAS39-209ENST00000556909 LTBRP36941 435 aa20.93■□□□□ 0.94
VIPAS39-209ENST00000556909 ZP2Q05996 745 aa20.93■□□□□ 0.94
VIPAS39-209ENST00000556909 HYAL1Q12794 435 aa20.93■□□□□ 0.94
VIPAS39-209ENST00000556909 CTC1Q2NKJ3 1217 aa20.93■□□□□ 0.94
VIPAS39-209ENST00000556909 TYW1BQ6NUM6 668 aa20.93■□□□□ 0.94
VIPAS39-209ENST00000556909 CYP2W1Q8TAV3 490 aa20.93■□□□□ 0.94
VIPAS39-209ENST00000556909 MXRA8Q9BRK3 442 aa20.93■□□□□ 0.94
VIPAS39-209ENST00000556909 AZI2Q9H6S1 392 aa20.93■□□□□ 0.94
VIPAS39-209ENST00000556909 TRPC6Q9Y210 931 aa20.93■□□□□ 0.94
VIPAS39-209ENST00000556909 FAM50BQ9Y247 325 aa20.93■□□□□ 0.94
VIPAS39-209ENST00000556909 EVPLQ92817 2033 aa20.93■□□□□ 0.94
VIPAS39-209ENST00000556909 FNDC1Q4ZHG4 1894 aaPredicted RBP20.92■□□□□ 0.94
VIPAS39-209ENST00000556909 PRR33A8MZF0 331 aa20.92■□□□□ 0.94
VIPAS39-209ENST00000556909 NCK2O43639 380 aa20.92■□□□□ 0.94
VIPAS39-209ENST00000556909 MMP1P03956 469 aa20.92■□□□□ 0.94
VIPAS39-209ENST00000556909 IER5Q5VY09 327 aa20.92■□□□□ 0.94
VIPAS39-209ENST00000556909 TRAPPC12Q8WVT3 735 aa20.92■□□□□ 0.94
VIPAS39-209ENST00000556909 PGBD1Q96JS3 809 aa20.92■□□□□ 0.94
VIPAS39-209ENST00000556909 PLVAPQ9BX97 442 aa20.92■□□□□ 0.94
VIPAS39-209ENST00000556909 ANO2Q9NQ90 1003 aa20.92■□□□□ 0.94
VIPAS39-209ENST00000556909 PRKAG3Q9UGI9 489 aa20.92■□□□□ 0.94
VIPAS39-209ENST00000556909 TRPV2Q9Y5S1 764 aa20.92■□□□□ 0.94
VIPAS39-209ENST00000556909 NFASCO94856 1347 aa20.92■□□□□ 0.94
VIPAS39-209ENST00000556909 POTEB3A0JP26 581 aa20.91■□□□□ 0.94
VIPAS39-209ENST00000556909 ALADP13716 330 aa20.91■□□□□ 0.94
VIPAS39-209ENST00000556909 MYH9P35579 1960 aaKnown RBP20.91■□□□□ 0.94
VIPAS39-209ENST00000556909 NAPAP54920 295 aa20.91■□□□□ 0.94
VIPAS39-209ENST00000556909 ACTR2P61160 394 aa20.91■□□□□ 0.94
VIPAS39-209ENST00000556909 TMEM62Q0P6H9 643 aa20.91■□□□□ 0.94
VIPAS39-209ENST00000556909 PLCB4Q15147 1175 aa20.91■□□□□ 0.94
VIPAS39-209ENST00000556909 APOA5Q6Q788 366 aa20.91■□□□□ 0.94
VIPAS39-209ENST00000556909 POTEBQ6S5H4 581 aa20.91■□□□□ 0.94
VIPAS39-209ENST00000556909 CRIPAKQ8N1N5 446 aa20.91■□□□□ 0.94
VIPAS39-209ENST00000556909 SDF4Q9BRK5 362 aa20.91■□□□□ 0.94
VIPAS39-209ENST00000556909 FTHL17Q9BXU8 183 aa20.91■□□□□ 0.94
VIPAS39-209ENST00000556909 RIC8AQ9NPQ8 531 aa20.91■□□□□ 0.94
VIPAS39-209ENST00000556909 IGSF9BQ9UPX0 1349 aa20.91■□□□□ 0.94
VIPAS39-209ENST00000556909 PCDHA2Q9Y5H9 948 aa20.91■□□□□ 0.94
VIPAS39-209ENST00000556909 MRPL42Q9Y6G3 142 aaKnown RBP20.91■□□□□ 0.94
VIPAS39-209ENST00000556909 SQORQ9Y6N5 450 aa20.91■□□□□ 0.94
VIPAS39-209ENST00000556909 WDR81Q562E7 1941 aa20.9■□□□□ 0.94
VIPAS39-209ENST00000556909 M0QZ92 97 aa20.9■□□□□ 0.94
VIPAS39-209ENST00000556909 CSPG5O95196 566 aa20.9■□□□□ 0.94
VIPAS39-209ENST00000556909 ARP10275 920 aa20.9■□□□□ 0.94
VIPAS39-209ENST00000556909 DLX2Q07687 328 aaPredicted RBP20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms