RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 KISS1RQ969F8 398 aaPredicted RBP7.39□□□□□ -1.23
HIF1A-209ENST00000556827 NGRNQ9NPE2 291 aaKnown RBP7.39□□□□□ -1.23
HIF1A-209ENST00000556827 ZNF652Q9Y2D9 606 aa7.39□□□□□ -1.23
HIF1A-209ENST00000556827 PCDHB4Q9Y5E5 795 aa7.39□□□□□ -1.23
HIF1A-209ENST00000556827 MLH3Q9UHC1 1453 aa7.38□□□□□ -1.23
HIF1A-209ENST00000556827 ESYT3A0FGR9 886 aa7.38□□□□□ -1.23
HIF1A-209ENST00000556827 RPL13P26373 211 aaKnown RBP7.38□□□□□ -1.23
HIF1A-209ENST00000556827 ITGA1P56199 1179 aa7.38□□□□□ -1.23
HIF1A-209ENST00000556827 LONRF2Q1L5Z9 754 aa7.38□□□□□ -1.23
HIF1A-209ENST00000556827 IPO9Q96P70 1041 aaKnown RBP7.38□□□□□ -1.23
HIF1A-209ENST00000556827 PHF20Q9BVI0 1012 aa7.38□□□□□ -1.23
HIF1A-209ENST00000556827 EPB41L1Q9H4G0 881 aa7.38□□□□□ -1.23
HIF1A-209ENST00000556827 CFDP1Q9UEE9 299 aaPredicted RBP7.38□□□□□ -1.23
HIF1A-209ENST00000556827 TRAF6Q9Y4K3 522 aa7.38□□□□□ -1.23
HIF1A-209ENST00000556827 PTPRTO14522 1441 aa7.37□□□□□ -1.23
HIF1A-209ENST00000556827 CASKIN1Q8WXD9 1431 aa7.37□□□□□ -1.23
HIF1A-209ENST00000556827 C6orf222P0C671 652 aaPredicted RBP7.37□□□□□ -1.23
HIF1A-209ENST00000556827 LCE5AQ5TCM9 118 aa7.37□□□□□ -1.23
HIF1A-209ENST00000556827 ZSWIM2Q8NEG5 633 aa7.37□□□□□ -1.23
HIF1A-209ENST00000556827 KRTAP4-2Q9BYR5 136 aa7.37□□□□□ -1.23
HIF1A-209ENST00000556827 NPFFR2Q9Y5X5 522 aa7.37□□□□□ -1.23
HIF1A-209ENST00000556827 DUSP10Q9Y6W6 482 aa7.37□□□□□ -1.23
HIF1A-209ENST00000556827 FER1L4A9Z1Z3 1794 aa7.37□□□□□ -1.23
HIF1A-209ENST00000556827 MYO5CQ9NQX4 1742 aa7.36□□□□□ -1.23
HIF1A-209ENST00000556827 K7ESM1 405 aa7.36□□□□□ -1.23
HIF1A-209ENST00000556827 HNRNPMP52272 730 aaKnown RBP eCLIP7.36□□□□□ -1.23
HIF1A-209ENST00000556827 SUMO1P63165 101 aaKnown RBP7.36□□□□□ -1.23
HIF1A-209ENST00000556827 RGL3Q3MIN7 710 aa7.36□□□□□ -1.23
HIF1A-209ENST00000556827 GGT6Q6P531 493 aa7.36□□□□□ -1.23
HIF1A-209ENST00000556827 NOP9Q86U38 636 aaKnown RBP7.36□□□□□ -1.23
HIF1A-209ENST00000556827 DCAF4Q8WV16 495 aa7.36□□□□□ -1.23
HIF1A-209ENST00000556827 TOE1Q96GM8 510 aaKnown RBP7.36□□□□□ -1.23
HIF1A-209ENST00000556827 KRTAP17-1Q9BYP8 105 aa7.36□□□□□ -1.23
HIF1A-209ENST00000556827 KRTAP9-3Q9BYQ3 159 aa7.36□□□□□ -1.23
HIF1A-209ENST00000556827 PPARGC1AQ9UBK2 798 aaKnown RBP7.36□□□□□ -1.23
HIF1A-209ENST00000556827 ZMYM3Q14202 1370 aa7.35□□□□□ -1.23
HIF1A-209ENST00000556827 CCNB3Q8WWL7 1395 aa7.35□□□□□ -1.23
HIF1A-209ENST00000556827 PREX1Q8TCU6 1659 aa7.35□□□□□ -1.23
HIF1A-209ENST00000556827 KDM5CP41229 1560 aa7.35□□□□□ -1.23
HIF1A-209ENST00000556827 MAFKO60675 156 aa7.35□□□□□ -1.23
HIF1A-209ENST00000556827 CR1LQ2VPA4 569 aa7.35□□□□□ -1.23
HIF1A-209ENST00000556827 SPATS1Q496A3 300 aa7.35□□□□□ -1.23
HIF1A-209ENST00000556827 FAM124AQ86V42 546 aa7.35□□□□□ -1.23
HIF1A-209ENST00000556827 ARRDC4Q8NCT1 418 aa7.35□□□□□ -1.23
HIF1A-209ENST00000556827 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.35□□□□□ -1.23
HIF1A-209ENST00000556827 KRTAP4-11Q9BYQ6 195 aa7.35□□□□□ -1.23
HIF1A-209ENST00000556827 DTLQ9NZJ0 730 aa7.35□□□□□ -1.23
HIF1A-209ENST00000556827 MYOTQ9UBF9 498 aa7.35□□□□□ -1.23
HIF1A-209ENST00000556827 AGLP35573 1532 aa7.35□□□□□ -1.23
HIF1A-209ENST00000556827 NPATQ14207 1427 aa7.35□□□□□ -1.23
HIF1A-209ENST00000556827 MTUS2Q5JR59 1369 aa7.34□□□□□ -1.23
HIF1A-209ENST00000556827 REREQ9P2R6 1566 aa7.34□□□□□ -1.23
HIF1A-209ENST00000556827 TCRBV5S2A0A599 114 aa7.34□□□□□ -1.23
HIF1A-209ENST00000556827 PPP1R12AO14974 1030 aaPredicted RBP7.34□□□□□ -1.23
HIF1A-209ENST00000556827 ADRB1P08588 477 aa7.34□□□□□ -1.23
HIF1A-209ENST00000556827 EMC4Q5J8M3 183 aa7.34□□□□□ -1.23
HIF1A-209ENST00000556827 FAM26FQ5R3K3 315 aa7.34□□□□□ -1.23
HIF1A-209ENST00000556827 PRAMEF18Q5VWM3 479 aa7.34□□□□□ -1.23
HIF1A-209ENST00000556827 MCTP2Q6DN12 878 aa7.34□□□□□ -1.23
HIF1A-209ENST00000556827 STYK1Q6J9G0 422 aa7.34□□□□□ -1.23
HIF1A-209ENST00000556827 ZSWIM3Q96MP5 696 aa7.34□□□□□ -1.23
HIF1A-209ENST00000556827 GPR27Q9NS67 375 aa7.34□□□□□ -1.23
HIF1A-209ENST00000556827 FANCLQ9NW38 375 aa7.34□□□□□ -1.23
HIF1A-209ENST00000556827 TMEM260Q9NX78 707 aa7.34□□□□□ -1.23
HIF1A-209ENST00000556827 TBX22Q9Y458 520 aa7.34□□□□□ -1.23
HIF1A-209ENST00000556827 PLEKHH2Q8IVE3 1493 aa7.34□□□□□ -1.23
HIF1A-209ENST00000556827 DIP2CQ9Y2E4 1556 aa7.33□□□□□ -1.24
HIF1A-209ENST00000556827 KRIT1O00522 736 aa7.33□□□□□ -1.24
HIF1A-209ENST00000556827 DDX3XO00571 662 aaKnown RBP eCLIP7.33□□□□□ -1.24
HIF1A-209ENST00000556827 ASMTLO95671 621 aa7.33□□□□□ -1.24
HIF1A-209ENST00000556827 KIAA2012Q0VF49 1180 aa7.33□□□□□ -1.24
HIF1A-209ENST00000556827 EFEMP1Q12805 493 aa7.33□□□□□ -1.24
HIF1A-209ENST00000556827 C21orf62-AS1Q17RA5 79 aa7.33□□□□□ -1.24
HIF1A-209ENST00000556827 ZC3H12BQ5HYM0 836 aaKnown RBP7.33□□□□□ -1.24
HIF1A-209ENST00000556827 BORAQ6PGQ7 559 aa7.33□□□□□ -1.24
HIF1A-209ENST00000556827 SLC7A14Q8TBB6 771 aa7.33□□□□□ -1.24
HIF1A-209ENST00000556827 PHOSPHO1Q8TCT1 267 aa7.33□□□□□ -1.24
HIF1A-209ENST00000556827 CLIC6Q96NY7 704 aa7.33□□□□□ -1.24
HIF1A-209ENST00000556827 SLC52A2Q9HAB3 445 aa7.33□□□□□ -1.24
HIF1A-209ENST00000556827 NDOR1Q9UHB4 597 aa7.33□□□□□ -1.24
HIF1A-209ENST00000556827 SIGLEC1Q9BZZ2 1709 aa7.32□□□□□ -1.24
HIF1A-209ENST00000556827 ABCC1P33527 1531 aa7.32□□□□□ -1.24
HIF1A-209ENST00000556827 FYCO1Q9BQS8 1478 aa7.32□□□□□ -1.24
HIF1A-209ENST00000556827 TLDC2A0PJX2 215 aa7.32□□□□□ -1.24
HIF1A-209ENST00000556827 TADA3O75528 432 aa7.32□□□□□ -1.24
HIF1A-209ENST00000556827 GPR85P60893 370 aa7.32□□□□□ -1.24
HIF1A-209ENST00000556827 ADAM9Q13443 819 aa7.32□□□□□ -1.24
HIF1A-209ENST00000556827 ZNF827Q17R98 1081 aa7.32□□□□□ -1.24
HIF1A-209ENST00000556827 TEPPQ6URK8 271 aa7.32□□□□□ -1.24
HIF1A-209ENST00000556827 LBX2Q6XYB7 198 aa7.32□□□□□ -1.24
HIF1A-209ENST00000556827 DBX2Q6ZNG2 339 aa7.32□□□□□ -1.24
HIF1A-209ENST00000556827 IFNL3Q8IZI9 196 aa7.32□□□□□ -1.24
HIF1A-209ENST00000556827 PTPRN2Q92932 1015 aa7.32□□□□□ -1.24
HIF1A-209ENST00000556827 BORCS6Q96GS4 357 aa7.32□□□□□ -1.24
HIF1A-209ENST00000556827 JAM3Q9BX67 310 aa7.32□□□□□ -1.24
HIF1A-209ENST00000556827 SMOC1Q9H4F8 434 aa7.32□□□□□ -1.24
HIF1A-209ENST00000556827 NCOA5Q9HCD5 579 aaKnown RBP7.32□□□□□ -1.24
HIF1A-209ENST00000556827 CNOT11Q9UKZ1 510 aaKnown RBP7.32□□□□□ -1.24
HIF1A-209ENST00000556827 PCDHA9Q9Y5H5 950 aa7.32□□□□□ -1.24
HIF1A-209ENST00000556827 PCDHA8Q9Y5H6 950 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms