RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 PPP2R2CQ9Y2T4 447 aa20.28■□□□□ 0.84
SDR39U1-220ENST00000556548 TTC26A0AVF1 554 aa20.28■□□□□ 0.84
SDR39U1-220ENST00000556548 RIOK3O14730 519 aaKnown RBP20.28■□□□□ 0.84
SDR39U1-220ENST00000556548 TBCAO75347 108 aaKnown RBP20.28■□□□□ 0.84
SDR39U1-220ENST00000556548 BCRP11274 1271 aa20.28■□□□□ 0.84
SDR39U1-220ENST00000556548 KRT9P35527 623 aa20.28■□□□□ 0.84
SDR39U1-220ENST00000556548 ZCWPW2Q504Y3 356 aa20.28■□□□□ 0.84
SDR39U1-220ENST00000556548 CLMNQ96JQ2 1002 aa20.28■□□□□ 0.84
SDR39U1-220ENST00000556548 PRIMPOLQ96LW4 560 aa20.28■□□□□ 0.84
SDR39U1-220ENST00000556548 MAP3K20Q9NYL2 800 aaKnown RBP20.28■□□□□ 0.84
SDR39U1-220ENST00000556548 PRPF6O94906 941 aaKnown RBP20.27■□□□□ 0.84
SDR39U1-220ENST00000556548 PDE4CQ08493 712 aa20.27■□□□□ 0.84
SDR39U1-220ENST00000556548 TTLL12Q14166 644 aaPredicted RBP20.27■□□□□ 0.84
SDR39U1-220ENST00000556548 RAD9BQ6WBX8 426 aa20.27■□□□□ 0.84
SDR39U1-220ENST00000556548 MRPL44Q9H9J2 332 aaKnown RBP20.27■□□□□ 0.84
SDR39U1-220ENST00000556548 ABHD10Q9NUJ1 306 aa20.27■□□□□ 0.84
SDR39U1-220ENST00000556548 FGFR1OPO95684 399 aaKnown RBP20.27■□□□□ 0.84
SDR39U1-220ENST00000556548 REXO1L1PQ8IX06 675 aa20.27■□□□□ 0.84
SDR39U1-220ENST00000556548 OTUD5Q96G74 571 aa20.27■□□□□ 0.84
SDR39U1-220ENST00000556548 NACC1Q96RE7 527 aa20.27■□□□□ 0.84
SDR39U1-220ENST00000556548 SH2D3AQ9BRG2 576 aa20.27■□□□□ 0.84
SDR39U1-220ENST00000556548 TEX13BQ9BXU2 312 aa20.27■□□□□ 0.84
SDR39U1-220ENST00000556548 KCTD10Q9H3F6 313 aa20.27■□□□□ 0.84
SDR39U1-220ENST00000556548 HOXC10Q9NYD6 342 aa20.27■□□□□ 0.84
SDR39U1-220ENST00000556548 COL11A1P12107 1806 aaPredicted RBP20.27■□□□□ 0.83
SDR39U1-220ENST00000556548 FKBP3Q00688 224 aaKnown RBP20.26■□□□□ 0.83
SDR39U1-220ENST00000556548 VWA3BQ502W6 1294 aa20.26■□□□□ 0.83
SDR39U1-220ENST00000556548 DPY19L2Q6NUT2 758 aa20.26■□□□□ 0.83
SDR39U1-220ENST00000556548 GADL1Q6ZQY3 521 aa20.26■□□□□ 0.83
SDR39U1-220ENST00000556548 C1orf186Q6ZWK4 172 aa20.26■□□□□ 0.83
SDR39U1-220ENST00000556548 MAEAQ7L5Y9 396 aa20.26■□□□□ 0.83
SDR39U1-220ENST00000556548 TSC1Q92574 1164 aa20.26■□□□□ 0.83
SDR39U1-220ENST00000556548 PNMA2Q9UL42 364 aa20.26■□□□□ 0.83
SDR39U1-220ENST00000556548 RLFQ13129 1914 aa20.26■□□□□ 0.83
SDR39U1-220ENST00000556548 PARP14Q460N5 1801 aa20.26■□□□□ 0.83
SDR39U1-220ENST00000556548 FRMPD4Q14CM0 1322 aa20.26■□□□□ 0.83
SDR39U1-220ENST00000556548 A0A1W2PQC6 194 aa20.26■□□□□ 0.83
SDR39U1-220ENST00000556548 GCNT3O95395 438 aa20.26■□□□□ 0.83
SDR39U1-220ENST00000556548 UTP14CQ5TAP6 766 aaKnown RBP20.26■□□□□ 0.83
SDR39U1-220ENST00000556548 SYT10Q6XYQ8 523 aa20.26■□□□□ 0.83
SDR39U1-220ENST00000556548 NIPA1Q7RTP0 329 aa20.26■□□□□ 0.83
SDR39U1-220ENST00000556548 MYCT1Q8N699 235 aa20.26■□□□□ 0.83
SDR39U1-220ENST00000556548 RASSF10A6NK89 507 aa20.25■□□□□ 0.83
SDR39U1-220ENST00000556548 FAM13AO94988 1023 aa20.25■□□□□ 0.83
SDR39U1-220ENST00000556548 TRIM21P19474 475 aaKnown RBP20.25■□□□□ 0.83
SDR39U1-220ENST00000556548 KCNA1Q09470 495 aa20.25■□□□□ 0.83
SDR39U1-220ENST00000556548 TRIM14Q14142 442 aa20.25■□□□□ 0.83
SDR39U1-220ENST00000556548 CCDC40Q4G0X9 1142 aa20.25■□□□□ 0.83
SDR39U1-220ENST00000556548 CCDC155Q8N6L0 562 aa20.25■□□□□ 0.83
SDR39U1-220ENST00000556548 MYRIPQ8NFW9 859 aa20.25■□□□□ 0.83
SDR39U1-220ENST00000556548 NDST4Q9H3R1 872 aa20.25■□□□□ 0.83
SDR39U1-220ENST00000556548 COL4A3BPQ9Y5P4 624 aa20.25■□□□□ 0.83
SDR39U1-220ENST00000556548 IRF6O14896 467 aa20.25■□□□□ 0.83
SDR39U1-220ENST00000556548 SORBS3O60504 671 aa20.25■□□□□ 0.83
SDR39U1-220ENST00000556548 NR3C2P08235 984 aa20.25■□□□□ 0.83
SDR39U1-220ENST00000556548 HOXD13P35453 343 aa20.25■□□□□ 0.83
SDR39U1-220ENST00000556548 OAZ1P54368 228 aa20.25■□□□□ 0.83
SDR39U1-220ENST00000556548 EAPPQ56P03 285 aaPredicted RBP20.25■□□□□ 0.83
SDR39U1-220ENST00000556548 SH3D19Q5HYK7 790 aa20.25■□□□□ 0.83
SDR39U1-220ENST00000556548 FKBP15Q5T1M5 1219 aa20.25■□□□□ 0.83
SDR39U1-220ENST00000556548 RBM46Q8TBY0 533 aaKnown RBP20.25■□□□□ 0.83
SDR39U1-220ENST00000556548 IKZF4Q9H2S9 585 aa20.25■□□□□ 0.83
SDR39U1-220ENST00000556548 A1CFQ9NQ94 594 aaKnown RBP20.25■□□□□ 0.83
SDR39U1-220ENST00000556548 AGPAT5Q9NUQ2 364 aa20.25■□□□□ 0.83
SDR39U1-220ENST00000556548 TMEM150BA6NC51 233 aa20.24■□□□□ 0.83
SDR39U1-220ENST00000556548 ZSCAN12O43309 604 aa20.24■□□□□ 0.83
SDR39U1-220ENST00000556548 NMT1P30419 496 aaKnown RBP20.24■□□□□ 0.83
SDR39U1-220ENST00000556548 IREB2P48200 963 aaKnown RBP20.24■□□□□ 0.83
SDR39U1-220ENST00000556548 ERVK-24P63145 666 aa20.24■□□□□ 0.83
SDR39U1-220ENST00000556548 SAMD3Q8N6K7 520 aa20.24■□□□□ 0.83
SDR39U1-220ENST00000556548 CDCA5Q96FF9 252 aa20.24■□□□□ 0.83
SDR39U1-220ENST00000556548 ACAD9Q9H845 621 aa20.24■□□□□ 0.83
SDR39U1-220ENST00000556548 CYP39A1Q9NYL5 469 aa20.24■□□□□ 0.83
SDR39U1-220ENST00000556548 LUC7L2Q9Y383 392 aaKnown RBP20.24■□□□□ 0.83
SDR39U1-220ENST00000556548 A0A0U1RQJ8 604 aa20.24■□□□□ 0.83
SDR39U1-220ENST00000556548 ARHGEF35A5YM69 484 aa20.24■□□□□ 0.83
SDR39U1-220ENST00000556548 KIF20AO95235 890 aa20.24■□□□□ 0.83
SDR39U1-220ENST00000556548 EPHX2P34913 555 aa20.24■□□□□ 0.83
SDR39U1-220ENST00000556548 ADAM9Q13443 819 aa20.24■□□□□ 0.83
SDR39U1-220ENST00000556548 MAN2A1Q16706 1144 aa20.24■□□□□ 0.83
SDR39U1-220ENST00000556548 VSIG10LQ86VR7 867 aa20.24■□□□□ 0.83
SDR39U1-220ENST00000556548 KSR1Q8IVT5 923 aa20.24■□□□□ 0.83
SDR39U1-220ENST00000556548 ATRIPQ8WXE1 791 aa20.24■□□□□ 0.83
SDR39U1-220ENST00000556548 CCDC51Q96ER9 411 aa20.24■□□□□ 0.83
SDR39U1-220ENST00000556548 CHP1Q99653 195 aa20.24■□□□□ 0.83
SDR39U1-220ENST00000556548 RBBP6Q7Z6E9 1792 aaKnown RBP20.24■□□□□ 0.83
SDR39U1-220ENST00000556548 CCP110O43303 1012 aa20.23■□□□□ 0.83
SDR39U1-220ENST00000556548 P4HBP07237 508 aaKnown RBP20.23■□□□□ 0.83
SDR39U1-220ENST00000556548 CCND2P30279 289 aa20.23■□□□□ 0.83
SDR39U1-220ENST00000556548 HOXA7P31268 230 aaPredicted RBP20.23■□□□□ 0.83
SDR39U1-220ENST00000556548 ZC2HC1CQ53FD0 456 aaPredicted RBP20.23■□□□□ 0.83
SDR39U1-220ENST00000556548 NAA15Q9BXJ9 866 aaKnown RBP20.23■□□□□ 0.83
SDR39U1-220ENST00000556548 UGCGQ16739 394 aa20.22■□□□□ 0.83
SDR39U1-220ENST00000556548 KNOP1Q1ED39 458 aaKnown RBP20.22■□□□□ 0.83
SDR39U1-220ENST00000556548 EPM2AIP1Q7L775 607 aaPredicted RBP20.22■□□□□ 0.83
SDR39U1-220ENST00000556548 TBC1D22BQ9NU19 505 aa20.22■□□□□ 0.83
SDR39U1-220ENST00000556548 TCEAL9Q9UHQ7 104 aa20.22■□□□□ 0.83
SDR39U1-220ENST00000556548 CAPN11Q9UMQ6 739 aa20.22■□□□□ 0.83
SDR39U1-220ENST00000556548 DYNC1I1O14576 645 aa20.22■□□□□ 0.83
SDR39U1-220ENST00000556548 CCNE2O96020 404 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms