RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 GTF3C6Q969F1 213 aa9.22□□□□□ -0.93
VTI1B-206ENST00000556461 TIFAQ96CG3 184 aa9.22□□□□□ -0.93
VTI1B-206ENST00000556461 ZNF577Q9BSK1 485 aa9.22□□□□□ -0.93
VTI1B-206ENST00000556461 PHF20Q9BVI0 1012 aa9.22□□□□□ -0.93
VTI1B-206ENST00000556461 SMARCAD1Q9H4L7 1026 aa9.22□□□□□ -0.93
VTI1B-206ENST00000556461 ORC3Q9UBD5 711 aaPredicted RBP9.22□□□□□ -0.93
VTI1B-206ENST00000556461 ZNF215Q9UL58 517 aaPredicted RBP9.22□□□□□ -0.93
VTI1B-206ENST00000556461 SLC4A7Q9Y6M7 1214 aa9.22□□□□□ -0.93
VTI1B-206ENST00000556461 EMSYQ7Z589 1322 aa9.22□□□□□ -0.93
VTI1B-206ENST00000556461 STK36Q9NRP7 1315 aa9.22□□□□□ -0.93
VTI1B-206ENST00000556461 SPTBN5Q9NRC6 3674 aaKnown RBP9.22□□□□□ -0.93
VTI1B-206ENST00000556461 IGKV6D-21A0A0A0MT36 114 aa9.21□□□□□ -0.94
VTI1B-206ENST00000556461 FAM205CA6NFA0 338 aa9.21□□□□□ -0.94
VTI1B-206ENST00000556461 RSPH10B2B2RC85 870 aa9.21□□□□□ -0.94
VTI1B-206ENST00000556461 MSH4O15457 936 aa9.21□□□□□ -0.94
VTI1B-206ENST00000556461 ARHGEF15O94989 841 aa9.21□□□□□ -0.94
VTI1B-206ENST00000556461 TDP2O95551 362 aa9.21□□□□□ -0.94
VTI1B-206ENST00000556461 RSPH10BP0C881 870 aa9.21□□□□□ -0.94
VTI1B-206ENST00000556461 INSRRP14616 1297 aa9.21□□□□□ -0.94
VTI1B-206ENST00000556461 ATP4AP20648 1035 aa9.21□□□□□ -0.94
VTI1B-206ENST00000556461 STAT5BP51692 787 aa9.21□□□□□ -0.94
VTI1B-206ENST00000556461 FOSBP53539 338 aa9.21□□□□□ -0.94
VTI1B-206ENST00000556461 IGBP1P78318 339 aa9.21□□□□□ -0.94
VTI1B-206ENST00000556461 DEFB103AP81534 67 aa9.21□□□□□ -0.94
VTI1B-206ENST00000556461 GRIN2CQ14957 1233 aa9.21□□□□□ -0.94
VTI1B-206ENST00000556461 ANKRD1Q15327 319 aa9.21□□□□□ -0.94
VTI1B-206ENST00000556461 GRIK4Q16099 956 aa9.21□□□□□ -0.94
VTI1B-206ENST00000556461 MCTP2Q6DN12 878 aa9.21□□□□□ -0.94
VTI1B-206ENST00000556461 CCDC60Q8IWA6 550 aaPredicted RBP9.21□□□□□ -0.94
VTI1B-206ENST00000556461 MYLIPQ8WY64 445 aa9.21□□□□□ -0.94
VTI1B-206ENST00000556461 CDX2Q99626 313 aaPredicted RBP9.21□□□□□ -0.94
VTI1B-206ENST00000556461 NKX2-4Q9H2Z4 354 aa9.21□□□□□ -0.94
VTI1B-206ENST00000556461 ERAP1Q9NZ08 941 aa9.21□□□□□ -0.94
VTI1B-206ENST00000556461 NRCAMQ92823 1304 aa9.21□□□□□ -0.94
VTI1B-206ENST00000556461 MBLAC1A4D2B0 266 aaPredicted RBP9.2□□□□□ -0.94
VTI1B-206ENST00000556461 CDKL5O76039 1030 aa9.2□□□□□ -0.94
VTI1B-206ENST00000556461 CHRNA1P02708 482 aa9.2□□□□□ -0.94
VTI1B-206ENST00000556461 GNAT1P11488 350 aa9.2□□□□□ -0.94
VTI1B-206ENST00000556461 ACTN1P12814 892 aa9.2□□□□□ -0.94
VTI1B-206ENST00000556461 ATP2A2P16615 1042 aaKnown RBP9.2□□□□□ -0.94
VTI1B-206ENST00000556461 USP11P51784 963 aa9.2□□□□□ -0.94
VTI1B-206ENST00000556461 WDR5P61964 334 aaKnown RBP9.2□□□□□ -0.94
VTI1B-206ENST00000556461 SETQ01105 290 aaPredicted RBP9.2□□□□□ -0.94
VTI1B-206ENST00000556461 MGAT3Q09327 533 aa9.2□□□□□ -0.94
VTI1B-206ENST00000556461 MKRN4PQ13434 485 aaPredicted RBP9.2□□□□□ -0.94
VTI1B-206ENST00000556461 INF2Q27J81 1249 aa9.2□□□□□ -0.94
VTI1B-206ENST00000556461 SWSAP1Q6NVH7 229 aa9.2□□□□□ -0.94
VTI1B-206ENST00000556461 CNKSR3Q6P9H4 555 aa9.2□□□□□ -0.94
VTI1B-206ENST00000556461 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.2□□□□□ -0.943e-7■■■□□ 16.7
VTI1B-206ENST00000556461 PLPPR4Q7Z2D5 763 aa9.2□□□□□ -0.94
VTI1B-206ENST00000556461 SPRED2Q7Z698 418 aa9.2□□□□□ -0.94
VTI1B-206ENST00000556461 DBF4BQ8NFT6 615 aa9.2□□□□□ -0.94
VTI1B-206ENST00000556461 DNAJB3Q8WWF6 145 aa9.2□□□□□ -0.94
VTI1B-206ENST00000556461 MBOAT7Q96N66 472 aa9.2□□□□□ -0.94
VTI1B-206ENST00000556461 C22orf23Q9BZE7 217 aa9.2□□□□□ -0.94
VTI1B-206ENST00000556461 MTIF3Q9H2K0 278 aaKnown RBP9.2□□□□□ -0.94
VTI1B-206ENST00000556461 ZNF576Q9H609 170 aa9.2□□□□□ -0.94
VTI1B-206ENST00000556461 AZI2Q9H6S1 392 aa9.2□□□□□ -0.94
VTI1B-206ENST00000556461 TUBE1Q9UJT0 475 aa9.2□□□□□ -0.94
VTI1B-206ENST00000556461 TRPC6Q9Y210 931 aa9.2□□□□□ -0.94
VTI1B-206ENST00000556461 STXBP5LQ9Y2K9 1186 aa9.2□□□□□ -0.94
VTI1B-206ENST00000556461 TRANK1O15050 2925 aa9.2□□□□□ -0.94
VTI1B-206ENST00000556461 VCANP13611 3396 aa9.19□□□□□ -0.94
VTI1B-206ENST00000556461 CYP3A7-CYP3A51PA0A087WV96 503 aa9.19□□□□□ -0.94
VTI1B-206ENST00000556461 POTEB3A0JP26 581 aa9.19□□□□□ -0.94
VTI1B-206ENST00000556461 ZBTB42B2RXF5 422 aa9.19□□□□□ -0.94
VTI1B-206ENST00000556461 BACH1O14867 736 aa9.19□□□□□ -0.94
VTI1B-206ENST00000556461 SLC37A4O43826 429 aa9.19□□□□□ -0.94
VTI1B-206ENST00000556461 EIF5BO60841 1220 aaKnown RBP9.19□□□□□ -0.94
VTI1B-206ENST00000556461 CYP3A7P24462 503 aa9.19□□□□□ -0.94
VTI1B-206ENST00000556461 NR5A1Q13285 461 aa9.19□□□□□ -0.94
VTI1B-206ENST00000556461 UGCGQ16739 394 aa9.19□□□□□ -0.94
VTI1B-206ENST00000556461 Q4G0T1 1027 aa9.19□□□□□ -0.94
VTI1B-206ENST00000556461 PLEKHG4Q58EX7 1191 aa9.19□□□□□ -0.94
VTI1B-206ENST00000556461 FAM26DQ5JW98 314 aa9.19□□□□□ -0.94
VTI1B-206ENST00000556461 GALNT17Q6IS24 598 aa9.19□□□□□ -0.94
VTI1B-206ENST00000556461 ZNF746Q6NUN9 644 aaPredicted RBP9.19□□□□□ -0.94
VTI1B-206ENST00000556461 MIS18BP1Q6P0N0 1132 aa9.19□□□□□ -0.94
VTI1B-206ENST00000556461 PDXDC2PQ6P474 469 aa9.19□□□□□ -0.94
VTI1B-206ENST00000556461 POTEBQ6S5H4 581 aa9.19□□□□□ -0.94
VTI1B-206ENST00000556461 HERC6Q8IVU3 1022 aa9.19□□□□□ -0.94
VTI1B-206ENST00000556461 CCDC83Q8IWF9 413 aa9.19□□□□□ -0.94
VTI1B-206ENST00000556461 ETNPPLQ8TBG4 499 aa9.19□□□□□ -0.94
VTI1B-206ENST00000556461 SLC5A5Q92911 643 aa9.19□□□□□ -0.94
VTI1B-206ENST00000556461 TNFRSF25Q93038 417 aa9.19□□□□□ -0.94
VTI1B-206ENST00000556461 FAM49AQ9H0Q0 323 aaPredicted RBP9.19□□□□□ -0.94
VTI1B-206ENST00000556461 UNC45AQ9H3U1 944 aa9.19□□□□□ -0.94
VTI1B-206ENST00000556461 ZNF302Q9NR11 478 aa9.19□□□□□ -0.94
VTI1B-206ENST00000556461 TBC1D22BQ9NU19 505 aa9.19□□□□□ -0.94
VTI1B-206ENST00000556461 MSRAQ9UJ68 235 aa9.19□□□□□ -0.94
VTI1B-206ENST00000556461 TMEM265A0A087WTH1 108 aa9.18□□□□□ -0.94
VTI1B-206ENST00000556461 LCHNA4D1U4 455 aa9.18□□□□□ -0.94
VTI1B-206ENST00000556461 WNT7AO00755 349 aa9.18□□□□□ -0.94
VTI1B-206ENST00000556461 CHMP2AO43633 222 aa9.18□□□□□ -0.94
VTI1B-206ENST00000556461 ZNF862O60290 1169 aa9.18□□□□□ -0.94
VTI1B-206ENST00000556461 REV3LO60673 3130 aa9.18□□□□□ -0.94
VTI1B-206ENST00000556461 GAS7O60861 476 aa9.18□□□□□ -0.94
VTI1B-206ENST00000556461 PSMD10O75832 226 aa9.18□□□□□ -0.94
VTI1B-206ENST00000556461 BAIAP3O94812 1187 aa9.18□□□□□ -0.94
VTI1B-206ENST00000556461 PARNO95453 639 aaKnown RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms