RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 IGBP1P78318 339 aa25.8■■□□□ 1.72
ACTN1-220ENST00000556433 APOBRQ0VD83 1088 aa25.8■■□□□ 1.72
ACTN1-220ENST00000556433 MARCH8Q5T0T0 291 aa25.8■■□□□ 1.72
ACTN1-220ENST00000556433 Q6ZUG5 572 aa25.8■■□□□ 1.72
ACTN1-220ENST00000556433 DNAJB3Q8WWF6 145 aa25.8■■□□□ 1.72
ACTN1-220ENST00000556433 CCDC136Q96JN2 1154 aa25.8■■□□□ 1.72
ACTN1-220ENST00000556433 JAKMIP1Q96N16 626 aaKnown RBP25.8■■□□□ 1.72
ACTN1-220ENST00000556433 YME1L1Q96TA2 773 aa25.8■■□□□ 1.72
ACTN1-220ENST00000556433 C17orf80Q9BSJ5 609 aa25.8■■□□□ 1.72
ACTN1-220ENST00000556433 NFASCO94856 1347 aa25.8■■□□□ 1.72
ACTN1-220ENST00000556433 CCDC196A0A1B0GTZ2 297 aa25.79■■□□□ 1.72
ACTN1-220ENST00000556433 MBLAC1A4D2B0 266 aaPredicted RBP25.79■■□□□ 1.72
ACTN1-220ENST00000556433 RRN3P2A6NIE6 340 aa25.79■■□□□ 1.72
ACTN1-220ENST00000556433 GHRP10912 638 aa25.79■■□□□ 1.72
ACTN1-220ENST00000556433 ZNF76P36508 570 aa25.79■■□□□ 1.72
ACTN1-220ENST00000556433 ACTR2P61160 394 aa25.79■■□□□ 1.72
ACTN1-220ENST00000556433 AP3B2Q13367 1082 aa25.79■■□□□ 1.72
ACTN1-220ENST00000556433 SP7Q8TDD2 431 aaPredicted RBP25.79■■□□□ 1.72
ACTN1-220ENST00000556433 AGO4Q9HCK5 861 aaKnown RBP25.79■■□□□ 1.72
ACTN1-220ENST00000556433 MEIS1O00470 390 aa25.78■■□□□ 1.72
ACTN1-220ENST00000556433 INSRRP14616 1297 aa25.78■■□□□ 1.72
ACTN1-220ENST00000556433 HSPA4P34932 840 aa25.78■■□□□ 1.72
ACTN1-220ENST00000556433 SREBF1P36956 1147 aa25.78■■□□□ 1.72
ACTN1-220ENST00000556433 CLK2P49760 499 aaKnown RBP25.78■■□□□ 1.72
ACTN1-220ENST00000556433 KCNQ1P51787 676 aa25.78■■□□□ 1.72
ACTN1-220ENST00000556433 MGAT3Q09327 533 aa25.78■■□□□ 1.72
ACTN1-220ENST00000556433 PFKFB3Q16875 520 aaPredicted RBP25.78■■□□□ 1.72
ACTN1-220ENST00000556433 JAKMIP3Q5VZ66 844 aa25.78■■□□□ 1.72
ACTN1-220ENST00000556433 BLOC1S2Q6QNY1 142 aa25.78■■□□□ 1.72
ACTN1-220ENST00000556433 FBXO22Q8NEZ5 403 aa25.78■■□□□ 1.72
ACTN1-220ENST00000556433 TNPO1Q92973 898 aaKnown RBP25.78■■□□□ 1.72
ACTN1-220ENST00000556433 BRF1Q92994 677 aa25.78■■□□□ 1.72
ACTN1-220ENST00000556433 HLA-CQ95604 372 aa25.78■■□□□ 1.72
ACTN1-220ENST00000556433 SNX14Q9Y5W7 946 aa25.78■■□□□ 1.72
ACTN1-220ENST00000556433 MICAL3Q7RTP6 2002 aa25.78■■□□□ 1.72
ACTN1-220ENST00000556433 STAT5BP51692 787 aa25.77■■□□□ 1.72
ACTN1-220ENST00000556433 ITGB3BPQ13352 177 aaPredicted RBP25.77■■□□□ 1.72
ACTN1-220ENST00000556433 ZBTB10Q96DT7 871 aa25.77■■□□□ 1.72
ACTN1-220ENST00000556433 TRPC6Q9Y210 931 aa25.77■■□□□ 1.72
ACTN1-220ENST00000556433 TRANK1O15050 2925 aa25.76■■□□□ 1.71
ACTN1-220ENST00000556433 SCG2P13521 617 aa25.76■■□□□ 1.71
ACTN1-220ENST00000556433 LPIN1Q14693 890 aa25.76■■□□□ 1.71
ACTN1-220ENST00000556433 PLPPR4Q7Z2D5 763 aa25.76■■□□□ 1.71
ACTN1-220ENST00000556433 FAM49AQ9H0Q0 323 aaPredicted RBP25.76■■□□□ 1.71
ACTN1-220ENST00000556433 CDY2AQ9Y6F7 541 aa25.76■■□□□ 1.71
ACTN1-220ENST00000556433 PLCB4Q15147 1175 aa25.75■■□□□ 1.71
ACTN1-220ENST00000556433 SAMD11Q96NU1 681 aa25.75■■□□□ 1.71
ACTN1-220ENST00000556433 NECAB3Q96P71 396 aaPredicted RBP25.75■■□□□ 1.71
ACTN1-220ENST00000556433 MRPS6P82932 125 aaKnown RBP25.74■■□□□ 1.71
ACTN1-220ENST00000556433 EPC2Q52LR7 807 aa25.74■■□□□ 1.71
ACTN1-220ENST00000556433 FBXO47Q5MNV8 452 aa25.74■■□□□ 1.71
ACTN1-220ENST00000556433 NIPA1Q7RTP0 329 aa25.74■■□□□ 1.71
ACTN1-220ENST00000556433 PLA2G4DQ86XP0 818 aa25.74■■□□□ 1.71
ACTN1-220ENST00000556433 C6orf50Q9HD87 102 aa25.74■■□□□ 1.71
ACTN1-220ENST00000556433 TCF20Q9UGU0 1960 aaKnown RBP25.74■■□□□ 1.71
ACTN1-220ENST00000556433 DDX39AO00148 427 aaKnown RBP25.73■■□□□ 1.71
ACTN1-220ENST00000556433 ENPP3O14638 875 aa25.73■■□□□ 1.71
ACTN1-220ENST00000556433 PRPF3O43395 683 aaKnown RBP25.73■■□□□ 1.71
ACTN1-220ENST00000556433 ATG7O95352 703 aa25.73■■□□□ 1.71
ACTN1-220ENST00000556433 RPLP2P05387 115 aaKnown RBP25.73■■□□□ 1.71
ACTN1-220ENST00000556433 RPS6KB1P23443 525 aa25.73■■□□□ 1.71
ACTN1-220ENST00000556433 IER5Q5VY09 327 aa25.73■■□□□ 1.71
ACTN1-220ENST00000556433 TRAPPC12Q8WVT3 735 aa25.73■■□□□ 1.71
ACTN1-220ENST00000556433 IL17RAQ96F46 866 aa25.73■■□□□ 1.71
ACTN1-220ENST00000556433 ZMYND12Q9H0C1 365 aa25.73■■□□□ 1.71
ACTN1-220ENST00000556433 PCDHA2Q9Y5H9 948 aa25.73■■□□□ 1.71
ACTN1-220ENST00000556433 NCOR1O75376 2440 aa25.73■■□□□ 1.71
ACTN1-220ENST00000556433 ESYT2A0FGR8 921 aa25.72■■□□□ 1.71
ACTN1-220ENST00000556433 POTEB3A0JP26 581 aa25.72■■□□□ 1.71
ACTN1-220ENST00000556433 FAM86B1E9PN63 330 aa25.72■■□□□ 1.71
ACTN1-220ENST00000556433 REC8O95072 547 aa25.72■■□□□ 1.71
ACTN1-220ENST00000556433 CCNE2O96020 404 aa25.72■■□□□ 1.71
ACTN1-220ENST00000556433 CYP3A4P08684 503 aa25.72■■□□□ 1.71
ACTN1-220ENST00000556433 FAM86B2P0C5J1 330 aa25.72■■□□□ 1.71
ACTN1-220ENST00000556433 PSMA5P28066 241 aa25.72■■□□□ 1.71
ACTN1-220ENST00000556433 AKAP17AQ02040 695 aaKnown RBP25.72■■□□□ 1.71
ACTN1-220ENST00000556433 PKN1Q16512 942 aa25.72■■□□□ 1.71
ACTN1-220ENST00000556433 POTEBQ6S5H4 581 aa25.72■■□□□ 1.71
ACTN1-220ENST00000556433 TSHZ1Q6ZSZ6 1077 aa25.72■■□□□ 1.71
ACTN1-220ENST00000556433 TMEM192Q8IY95 271 aa25.72■■□□□ 1.71
ACTN1-220ENST00000556433 FBXL16Q8N461 479 aa25.72■■□□□ 1.71
ACTN1-220ENST00000556433 CCDC12Q8WUD4 166 aaPredicted RBP25.72■■□□□ 1.71
ACTN1-220ENST00000556433 COL4A4P53420 1690 aaPredicted RBP25.71■■□□□ 1.71
ACTN1-220ENST00000556433 BACH1O14867 736 aa25.71■■□□□ 1.71
ACTN1-220ENST00000556433 ADAMTS3O15072 1205 aa25.71■■□□□ 1.71
ACTN1-220ENST00000556433 SLC26A2P50443 739 aa25.71■■□□□ 1.71
ACTN1-220ENST00000556433 TMEM62Q0P6H9 643 aa25.71■■□□□ 1.71
ACTN1-220ENST00000556433 GPM6BQ13491 265 aa25.71■■□□□ 1.71
ACTN1-220ENST00000556433 MCTP2Q6DN12 878 aa25.71■■□□□ 1.71
ACTN1-220ENST00000556433 ABHD15Q6UXT9 468 aa25.71■■□□□ 1.71
ACTN1-220ENST00000556433 PHKBQ93100 1093 aa25.71■■□□□ 1.71
ACTN1-220ENST00000556433 UIMC1Q96RL1 719 aa25.71■■□□□ 1.71
ACTN1-220ENST00000556433 AGO3Q9H9G7 860 aaKnown RBP25.71■■□□□ 1.71
ACTN1-220ENST00000556433 IGKV6D-21A0A0A0MT36 114 aa25.7■■□□□ 1.7
ACTN1-220ENST00000556433 M0QZ92 97 aa25.7■■□□□ 1.7
ACTN1-220ENST00000556433 GNA11P29992 359 aa25.7■■□□□ 1.7
ACTN1-220ENST00000556433 CD52P31358 61 aa25.7■■□□□ 1.7
ACTN1-220ENST00000556433 PTPROQ16827 1216 aa25.7■■□□□ 1.7
ACTN1-220ENST00000556433 FAM160B1Q5W0V3 765 aa25.7■■□□□ 1.7
ACTN1-220ENST00000556433 FIBCD1Q8N539 461 aa25.7■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms