RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 DYDC2Q96IM9 177 aa15.78■□□□□ 0.12
VIPAS39-208ENST00000556412 GLT1D1Q96MS3 346 aa15.78■□□□□ 0.12
VIPAS39-208ENST00000556412 PCYT2Q99447 389 aa15.78■□□□□ 0.12
VIPAS39-208ENST00000556412 EIF2AK1Q9BQI3 630 aaKnown RBP15.78■□□□□ 0.12
VIPAS39-208ENST00000556412 C16orf70Q9BSU1 422 aa15.78■□□□□ 0.12
VIPAS39-208ENST00000556412 TSEN34Q9BSV6 310 aaKnown RBP15.78■□□□□ 0.12
VIPAS39-208ENST00000556412 SENP6Q9GZR1 1112 aaPredicted RBP15.78■□□□□ 0.12
VIPAS39-208ENST00000556412 SCAND2PQ9GZW5 306 aaPredicted RBP15.78■□□□□ 0.12
VIPAS39-208ENST00000556412 SMARCAD1Q9H4L7 1026 aa15.78■□□□□ 0.12
VIPAS39-208ENST00000556412 RGL1Q9NZL6 768 aa15.78■□□□□ 0.12
VIPAS39-208ENST00000556412 A0A1W2PQ45 241 aaPredicted RBP15.77■□□□□ 0.11
VIPAS39-208ENST00000556412 A0A1W2PQY0 241 aa15.77■□□□□ 0.11
VIPAS39-208ENST00000556412 H3BRB1 525 aa15.77■□□□□ 0.11
VIPAS39-208ENST00000556412 HOXD8P13378 290 aaPredicted RBP15.77■□□□□ 0.11
VIPAS39-208ENST00000556412 CTTNQ14247 550 aaKnown RBP15.77■□□□□ 0.11
VIPAS39-208ENST00000556412 UGCGQ16739 394 aa15.77■□□□□ 0.11
VIPAS39-208ENST00000556412 TPH2Q8IWU9 490 aa15.77■□□□□ 0.11
VIPAS39-208ENST00000556412 IGSF22Q8N9C0 903 aa15.77■□□□□ 0.11
VIPAS39-208ENST00000556412 SNX29Q8TEQ0 813 aa15.77■□□□□ 0.11
VIPAS39-208ENST00000556412 LEO1Q8WVC0 666 aaPredicted RBP15.77■□□□□ 0.11
VIPAS39-208ENST00000556412 CSRNP2Q9H175 543 aa15.77■□□□□ 0.11
VIPAS39-208ENST00000556412 TUT1Q9H6E5 874 aaKnown RBP15.77■□□□□ 0.11
VIPAS39-208ENST00000556412 STARD7Q9NQZ5 370 aa15.77■□□□□ 0.11
VIPAS39-208ENST00000556412 PHF24Q9UPV7 400 aa15.77■□□□□ 0.11
VIPAS39-208ENST00000556412 SRPRBQ9Y5M8 271 aaKnown RBP15.77■□□□□ 0.11
VIPAS39-208ENST00000556412 EMSYQ7Z589 1322 aa15.76■□□□□ 0.11
VIPAS39-208ENST00000556412 PPP6R2O75170 966 aa15.76■□□□□ 0.11
VIPAS39-208ENST00000556412 F2P00734 622 aa15.76■□□□□ 0.11
VIPAS39-208ENST00000556412 CCT6AP40227 531 aaKnown RBP15.76■□□□□ 0.11
VIPAS39-208ENST00000556412 PDIA5Q14554 519 aa15.76■□□□□ 0.11
VIPAS39-208ENST00000556412 MFSD10Q14728 455 aa15.76■□□□□ 0.11
VIPAS39-208ENST00000556412 KIAA0753Q2KHM9 967 aa15.76■□□□□ 0.11
VIPAS39-208ENST00000556412 FAM47CQ5HY64 1035 aa15.76■□□□□ 0.11
VIPAS39-208ENST00000556412 KRT79Q5XKE5 535 aa15.76■□□□□ 0.11
VIPAS39-208ENST00000556412 ANKLE1Q8NAG6 615 aa15.76■□□□□ 0.11
VIPAS39-208ENST00000556412 RASSF8Q8NHQ8 419 aa15.76■□□□□ 0.11
VIPAS39-208ENST00000556412 KAT2BQ92831 832 aa15.76■□□□□ 0.11
VIPAS39-208ENST00000556412 ATP6V0A1Q93050 837 aa15.76■□□□□ 0.11
VIPAS39-208ENST00000556412 PAWRQ96IZ0 340 aaKnown RBP15.76■□□□□ 0.11
VIPAS39-208ENST00000556412 LXNQ9BS40 222 aa15.76■□□□□ 0.11
VIPAS39-208ENST00000556412 ERAP1Q9NZ08 941 aa15.76■□□□□ 0.11
VIPAS39-208ENST00000556412 RCOR1Q9UKL0 485 aa15.76■□□□□ 0.11
VIPAS39-208ENST00000556412 TRPC6Q9Y210 931 aa15.76■□□□□ 0.11
VIPAS39-208ENST00000556412 LGR5O75473 907 aa15.75■□□□□ 0.11
VIPAS39-208ENST00000556412 CABYRO75952 493 aa15.75■□□□□ 0.11
VIPAS39-208ENST00000556412 P4HBP07237 508 aaKnown RBP15.75■□□□□ 0.11
VIPAS39-208ENST00000556412 LONP1P36776 959 aaKnown RBP15.75■□□□□ 0.11
VIPAS39-208ENST00000556412 PSEN2P49810 448 aa15.75■□□□□ 0.11
VIPAS39-208ENST00000556412 MNX1P50219 401 aaPredicted RBP15.75■□□□□ 0.11
VIPAS39-208ENST00000556412 ATN1P54259 1190 aaPredicted RBP15.75■□□□□ 0.11
VIPAS39-208ENST00000556412 HAUS3Q68CZ6 603 aa15.75■□□□□ 0.11
VIPAS39-208ENST00000556412 KATNAL1Q9BW62 490 aa15.75■□□□□ 0.11
VIPAS39-208ENST00000556412 IGKV6D-21A0A0A0MT36 114 aa15.75■□□□□ 0.11
VIPAS39-208ENST00000556412 UBA7P41226 1012 aa15.75■□□□□ 0.11
VIPAS39-208ENST00000556412 QARSP47897 775 aaKnown RBP15.75■□□□□ 0.11
VIPAS39-208ENST00000556412 PSMC5P62195 406 aa15.75■□□□□ 0.11
VIPAS39-208ENST00000556412 PLPPR4Q7Z2D5 763 aa15.75■□□□□ 0.11
VIPAS39-208ENST00000556412 AFAP1L1Q8TED9 768 aa15.75■□□□□ 0.11
VIPAS39-208ENST00000556412 RNPEPQ9H4A4 650 aa15.75■□□□□ 0.11
VIPAS39-208ENST00000556412 C11orf49Q9H6J7 331 aa15.75■□□□□ 0.11
VIPAS39-208ENST00000556412 PCDHA7Q9UN72 937 aa15.75■□□□□ 0.11
VIPAS39-208ENST00000556412 KIAA1217Q5T5P2 1943 aa15.74■□□□□ 0.11
VIPAS39-208ENST00000556412 MED24O75448 989 aa15.74■□□□□ 0.11
VIPAS39-208ENST00000556412 PRKCEQ02156 737 aa15.74■□□□□ 0.11
VIPAS39-208ENST00000556412 NBPF20Q3BBV1 942 aa15.74■□□□□ 0.11
VIPAS39-208ENST00000556412 NECAB2Q7Z6G3 386 aa15.74■□□□□ 0.11
VIPAS39-208ENST00000556412 CABP7Q86V35 215 aa15.74■□□□□ 0.11
VIPAS39-208ENST00000556412 C7orf31Q8N865 590 aa15.74■□□□□ 0.11
VIPAS39-208ENST00000556412 NEK9Q8TD19 979 aa15.74■□□□□ 0.11
VIPAS39-208ENST00000556412 EPSTI1Q96J88 318 aa15.74■□□□□ 0.11
VIPAS39-208ENST00000556412 CDK5RAP3Q96JB5 506 aa15.74■□□□□ 0.11
VIPAS39-208ENST00000556412 AK8Q96MA6 479 aa15.74■□□□□ 0.11
VIPAS39-208ENST00000556412 PLIN2Q99541 437 aa15.74■□□□□ 0.11
VIPAS39-208ENST00000556412 WRAP73Q9P2S5 460 aaPredicted RBP15.74■□□□□ 0.11
VIPAS39-208ENST00000556412 MAFBQ9Y5Q3 323 aaPredicted RBP15.74■□□□□ 0.11
VIPAS39-208ENST00000556412 IGSF9BQ9UPX0 1349 aa15.74■□□□□ 0.11
VIPAS39-208ENST00000556412 A0A087WWV3 80 aa15.73■□□□□ 0.11
VIPAS39-208ENST00000556412 POTEB3A0JP26 581 aa15.73■□□□□ 0.11
VIPAS39-208ENST00000556412 ZNF862O60290 1169 aa15.73■□□□□ 0.11
VIPAS39-208ENST00000556412 CUTAO60888 179 aa15.73■□□□□ 0.11
VIPAS39-208ENST00000556412 SLITRK3O94933 977 aa15.73■□□□□ 0.11
VIPAS39-208ENST00000556412 ITGA7Q13683 1181 aa15.73■□□□□ 0.11
VIPAS39-208ENST00000556412 PLCB4Q15147 1175 aa15.73■□□□□ 0.11
VIPAS39-208ENST00000556412 POTEBQ6S5H4 581 aa15.73■□□□□ 0.11
VIPAS39-208ENST00000556412 POTEGQ6S5H5 508 aa15.73■□□□□ 0.11
VIPAS39-208ENST00000556412 CATSPER3Q86XQ3 398 aa15.73■□□□□ 0.11
VIPAS39-208ENST00000556412 SYMPKQ92797 1274 aaKnown RBP15.73■□□□□ 0.11
VIPAS39-208ENST00000556412 HSD17B14Q9BPX1 270 aa15.73■□□□□ 0.11
VIPAS39-208ENST00000556412 ZSWIM4Q9H7M6 989 aa15.73■□□□□ 0.11
VIPAS39-208ENST00000556412 SEPT9Q9UHD8 586 aaPredicted RBP15.73■□□□□ 0.11
VIPAS39-208ENST00000556412 STK24Q9Y6E0 443 aa15.73■□□□□ 0.11
VIPAS39-208ENST00000556412 MORC2Q9Y6X9 1032 aaPredicted RBP15.73■□□□□ 0.11
VIPAS39-208ENST00000556412 A0A0U1RQG5 324 aaPredicted RBP15.73■□□□□ 0.11
VIPAS39-208ENST00000556412 TMEM150BA6NC51 233 aa15.73■□□□□ 0.11
VIPAS39-208ENST00000556412 DDX11L8A8MPP1 907 aa15.73■□□□□ 0.11
VIPAS39-208ENST00000556412 DKC1O60832 514 aaKnown RBP eCLIP15.73■□□□□ 0.11
VIPAS39-208ENST00000556412 OATP04181 439 aa15.73■□□□□ 0.11
VIPAS39-208ENST00000556412 CAPN2P17655 700 aa15.73■□□□□ 0.11
VIPAS39-208ENST00000556412 TXLNAP40222 546 aa15.73■□□□□ 0.11
VIPAS39-208ENST00000556412 SLC26A2P50443 739 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms