RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 KIAA0825Q8IV33 1275 aa5.16□□□□□ -1.58
ATXN3-240ENST00000556339 C16orf71Q8IYS4 520 aaPredicted RBP5.16□□□□□ -1.58
ATXN3-240ENST00000556339 TMEM52Q8NDY8 209 aa5.16□□□□□ -1.58
ATXN3-240ENST00000556339 FERD3LQ96RJ6 166 aa5.16□□□□□ -1.58
ATXN3-240ENST00000556339 SPON2Q9BUD6 331 aa5.16□□□□□ -1.58
ATXN3-240ENST00000556339 BCL2L13Q9BXK5 485 aa5.16□□□□□ -1.58
ATXN3-240ENST00000556339 SLC12A9Q9BXP2 914 aa5.16□□□□□ -1.58
ATXN3-240ENST00000556339 PDLIM7Q9NR12 457 aa5.16□□□□□ -1.58
ATXN3-240ENST00000556339 PALD1Q9ULE6 856 aa5.16□□□□□ -1.58
ATXN3-240ENST00000556339 QSER1Q2KHR3 1735 aa5.16□□□□□ -1.58
ATXN3-240ENST00000556339 TAF1LQ8IZX4 1826 aa5.16□□□□□ -1.58
ATXN3-240ENST00000556339 C9IYK1 514 aa5.15□□□□□ -1.59
ATXN3-240ENST00000556339 FFAR3O14843 346 aa5.15□□□□□ -1.59
ATXN3-240ENST00000556339 RNMTO43148 476 aaKnown RBP5.15□□□□□ -1.59
ATXN3-240ENST00000556339 TP53P04637 393 aaPredicted RBP5.15□□□□□ -1.59
ATXN3-240ENST00000556339 CD3EP07766 207 aa5.15□□□□□ -1.59
ATXN3-240ENST00000556339 IMPDH2P12268 514 aa5.15□□□□□ -1.59
ATXN3-240ENST00000556339 DPEP1P16444 411 aa5.15□□□□□ -1.59
ATXN3-240ENST00000556339 IL13P35225 146 aa5.15□□□□□ -1.59
ATXN3-240ENST00000556339 FOXO4P98177 505 aa5.15□□□□□ -1.59
ATXN3-240ENST00000556339 SLC39A6Q13433 755 aa5.15□□□□□ -1.59
ATXN3-240ENST00000556339 RTP5Q14D33 572 aa5.15□□□□□ -1.59
ATXN3-240ENST00000556339 NT5DC1Q5TFE4 455 aa5.15□□□□□ -1.59
ATXN3-240ENST00000556339 GGNQ86UU5 652 aa5.15□□□□□ -1.59
ATXN3-240ENST00000556339 SLITRK4Q8IW52 837 aa5.15□□□□□ -1.59
ATXN3-240ENST00000556339 TTC5Q8N0Z6 440 aa5.15□□□□□ -1.59
ATXN3-240ENST00000556339 FIBCD1Q8N539 461 aa5.15□□□□□ -1.59
ATXN3-240ENST00000556339 GIPC2Q8TF65 315 aa5.15□□□□□ -1.59
ATXN3-240ENST00000556339 SPATA25Q9BR10 227 aa5.15□□□□□ -1.59
ATXN3-240ENST00000556339 NT5C1AQ9BXI3 368 aa5.15□□□□□ -1.59
ATXN3-240ENST00000556339 SRP68Q9UHB9 627 aaKnown RBP5.15□□□□□ -1.59
ATXN3-240ENST00000556339 SF3B6Q9Y3B4 125 aaKnown RBP5.15□□□□□ -1.59
ATXN3-240ENST00000556339 PAPPAQ13219 1627 aa5.15□□□□□ -1.59
ATXN3-240ENST00000556339 C4BP0C0L5 1744 aa5.14□□□□□ -1.59
ATXN3-240ENST00000556339 SHANK3Q9BYB0 1731 aa5.14□□□□□ -1.59
ATXN3-240ENST00000556339 K7ESM1 405 aa5.14□□□□□ -1.59
ATXN3-240ENST00000556339 SRGAP3O43295 1099 aa5.14□□□□□ -1.59
ATXN3-240ENST00000556339 STARD3NLO95772 234 aa5.14□□□□□ -1.59
ATXN3-240ENST00000556339 ITGA4P13612 1032 aa5.14□□□□□ -1.59
ATXN3-240ENST00000556339 GYS1P13807 737 aa5.14□□□□□ -1.59
ATXN3-240ENST00000556339 IGFBP6P24592 240 aaPredicted RBP5.14□□□□□ -1.59
ATXN3-240ENST00000556339 CANXP27824 592 aaKnown RBP5.14□□□□□ -1.59
ATXN3-240ENST00000556339 PMS1P54277 932 aaKnown RBP5.14□□□□□ -1.59
ATXN3-240ENST00000556339 PRR5P85299 388 aa5.14□□□□□ -1.59
ATXN3-240ENST00000556339 POU4F1Q01851 419 aa5.14□□□□□ -1.59
ATXN3-240ENST00000556339 TEFQ10587 303 aa5.14□□□□□ -1.59
ATXN3-240ENST00000556339 ZXDCQ2QGD7 858 aaPredicted RBP5.14□□□□□ -1.59
ATXN3-240ENST00000556339 DALRD3Q5D0E6 543 aaKnown RBP5.14□□□□□ -1.59
ATXN3-240ENST00000556339 DNAJC10Q8IXB1 793 aa5.14□□□□□ -1.59
ATXN3-240ENST00000556339 ADGRG2Q8IZP9 1017 aa5.14□□□□□ -1.59
ATXN3-240ENST00000556339 TP53I13Q8NBR0 393 aaPredicted RBP5.14□□□□□ -1.59
ATXN3-240ENST00000556339 ALG3Q92685 438 aa5.14□□□□□ -1.59
ATXN3-240ENST00000556339 RNF34Q969K3 372 aa5.14□□□□□ -1.59
ATXN3-240ENST00000556339 CFAP53Q96M91 514 aa5.14□□□□□ -1.59
ATXN3-240ENST00000556339 ZDHHC15Q96MV8 337 aa5.14□□□□□ -1.59
ATXN3-240ENST00000556339 GPR20Q99678 358 aa5.14□□□□□ -1.59
ATXN3-240ENST00000556339 NOL6Q9H6R4 1146 aaKnown RBP5.14□□□□□ -1.59
ATXN3-240ENST00000556339 SLC52A2Q9HAB3 445 aa5.14□□□□□ -1.59
ATXN3-240ENST00000556339 NUDCQ9Y266 331 aa5.14□□□□□ -1.59
ATXN3-240ENST00000556339 HCFC2Q9Y5Z7 792 aa5.14□□□□□ -1.59
ATXN3-240ENST00000556339 C5P01031 1676 aa5.14□□□□□ -1.59
ATXN3-240ENST00000556339 ATP10DQ9P241 1426 aa5.14□□□□□ -1.59
ATXN3-240ENST00000556339 GOLGB1Q14789 3259 aaKnown RBP5.14□□□□□ -1.59
ATXN3-240ENST00000556339 UTRNP46939 3433 aa5.13□□□□□ -1.59
ATXN3-240ENST00000556339 A0A087WZG4 1122 aa5.13□□□□□ -1.59
ATXN3-240ENST00000556339 A0A1B0GTL3 188 aa5.13□□□□□ -1.59
ATXN3-240ENST00000556339 FGF10O15520 208 aaPredicted RBP5.13□□□□□ -1.59
ATXN3-240ENST00000556339 PRICKLE3O43900 615 aaPredicted RBP5.13□□□□□ -1.59
ATXN3-240ENST00000556339 NCAM1P13591 858 aa5.13□□□□□ -1.59
ATXN3-240ENST00000556339 L1CAMP32004 1257 aa5.13□□□□□ -1.59
ATXN3-240ENST00000556339 NFKB2Q00653 900 aa5.13□□□□□ -1.59
ATXN3-240ENST00000556339 CAP1Q01518 475 aa5.13□□□□□ -1.59
ATXN3-240ENST00000556339 C9orf131Q5VYM1 1079 aa5.13□□□□□ -1.59
ATXN3-240ENST00000556339 INTS3Q68E01 1043 aaKnown RBP5.13□□□□□ -1.59
ATXN3-240ENST00000556339 LIPIQ6XZB0 460 aa5.13□□□□□ -1.59
ATXN3-240ENST00000556339 FNIP1Q8TF40 1166 aa5.13□□□□□ -1.59
ATXN3-240ENST00000556339 ZNF622Q969S3 477 aaKnown RBP eCLIP5.13□□□□□ -1.59
ATXN3-240ENST00000556339 PTCHD1Q96NR3 888 aa5.13□□□□□ -1.59
ATXN3-240ENST00000556339 TEX13AQ9BXU3 409 aaPredicted RBP5.13□□□□□ -1.59
ATXN3-240ENST00000556339 RNF38Q9H0F5 515 aa5.13□□□□□ -1.59
ATXN3-240ENST00000556339 GP6Q9HCN6 339 aa5.13□□□□□ -1.59
ATXN3-240ENST00000556339 ZNRF3Q9ULT6 936 aa5.13□□□□□ -1.59
ATXN3-240ENST00000556339 IRS2Q9Y4H2 1338 aa5.13□□□□□ -1.59
ATXN3-240ENST00000556339 UBR3Q6ZT12 1888 aa5.13□□□□□ -1.59
ATXN3-240ENST00000556339 H0YIN7 160 aa5.12□□□□□ -1.59
ATXN3-240ENST00000556339 SHOXO15266 292 aa5.12□□□□□ -1.59
ATXN3-240ENST00000556339 SERPINB2P05120 415 aa5.12□□□□□ -1.59
ATXN3-240ENST00000556339 ACRP10323 421 aa5.12□□□□□ -1.59
ATXN3-240ENST00000556339 INSRRP14616 1297 aa5.12□□□□□ -1.59
ATXN3-240ENST00000556339 HSPA6P17066 643 aa5.12□□□□□ -1.59
ATXN3-240ENST00000556339 CD247P20963 164 aa5.12□□□□□ -1.59
ATXN3-240ENST00000556339 CHRNA5P30532 468 aa5.12□□□□□ -1.59
ATXN3-240ENST00000556339 CORO7P57737 925 aa5.12□□□□□ -1.59
ATXN3-240ENST00000556339 GJA9P57773 515 aa5.12□□□□□ -1.59
ATXN3-240ENST00000556339 ZNF445P59923 1031 aa5.12□□□□□ -1.59
ATXN3-240ENST00000556339 DDX10Q13206 875 aaKnown RBP5.12□□□□□ -1.59
ATXN3-240ENST00000556339 PUM1Q14671 1186 aaKnown RBP eCLIP5.12□□□□□ -1.59
ATXN3-240ENST00000556339 PPP2R5DQ14738 602 aa5.12□□□□□ -1.59
ATXN3-240ENST00000556339 TCEAL1Q15170 157 aa5.12□□□□□ -1.59
ATXN3-240ENST00000556339 MTHFSDQ2M296 383 aaKnown RBP5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms