RNA–Protein interactions for RNA: ENST00000555806.5

NEDD1-208, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-208ENST00000555806 DEFB103AP81534 67 aa20.92■□□□□ 0.94
NEDD1-208ENST00000555806 TAF2Q6P1X5 1199 aa20.92■□□□□ 0.94
NEDD1-208ENST00000555806 ZNF577Q9BSK1 485 aa20.92■□□□□ 0.94
NEDD1-208ENST00000555806 IPO5O00410 1097 aaKnown RBP20.91■□□□□ 0.94
NEDD1-208ENST00000555806 BACH1O14867 736 aa20.91■□□□□ 0.94
NEDD1-208ENST00000555806 TLL1O43897 1013 aa20.91■□□□□ 0.94
NEDD1-208ENST00000555806 CDKL5O76039 1030 aa20.91■□□□□ 0.94
NEDD1-208ENST00000555806 STAT5BP51692 787 aa20.91■□□□□ 0.94
NEDD1-208ENST00000555806 SCRN1Q12765 414 aa20.91■□□□□ 0.94
NEDD1-208ENST00000555806 PTPRSQ13332 1948 aa20.91■□□□□ 0.94
NEDD1-208ENST00000555806 PRR16Q569H4 304 aa20.91■□□□□ 0.94
NEDD1-208ENST00000555806 RUFY4Q6ZNE9 571 aa20.91■□□□□ 0.94
NEDD1-208ENST00000555806 RSPH3Q86UC2 560 aa20.91■□□□□ 0.94
NEDD1-208ENST00000555806 DBF4BQ8NFT6 615 aa20.91■□□□□ 0.94
NEDD1-208ENST00000555806 TNPO1Q92973 898 aaKnown RBP20.91■□□□□ 0.94
NEDD1-208ENST00000555806 ZBED2Q9BTP6 218 aa20.91■□□□□ 0.94
NEDD1-208ENST00000555806 TCEAL9Q9UHQ7 104 aa20.91■□□□□ 0.94
NEDD1-208ENST00000555806 PCDHA4Q9UN74 947 aa20.91■□□□□ 0.94
NEDD1-208ENST00000555806 CDH23Q9H251 3354 aa20.9■□□□□ 0.94
NEDD1-208ENST00000555806 RRN3P2A6NIE6 340 aa20.9■□□□□ 0.94
NEDD1-208ENST00000555806 CCNE2O96020 404 aa20.9■□□□□ 0.94
NEDD1-208ENST00000555806 INSRRP14616 1297 aa20.9■□□□□ 0.94
NEDD1-208ENST00000555806 PLCB4Q15147 1175 aa20.9■□□□□ 0.94
NEDD1-208ENST00000555806 ANKRD1Q15327 319 aa20.9■□□□□ 0.94
NEDD1-208ENST00000555806 FAM160B1Q5W0V3 765 aa20.9■□□□□ 0.94
NEDD1-208ENST00000555806 PLPPR4Q7Z2D5 763 aa20.9■□□□□ 0.94
NEDD1-208ENST00000555806 TMCO2Q7Z6W1 182 aaPredicted RBP20.9■□□□□ 0.94
NEDD1-208ENST00000555806 SEPT8Q92599 483 aa20.9■□□□□ 0.94
NEDD1-208ENST00000555806 TBC1D22BQ9NU19 505 aa20.9■□□□□ 0.94
NEDD1-208ENST00000555806 TPCN1Q9ULQ1 816 aa20.9■□□□□ 0.94
NEDD1-208ENST00000555806 ATG7O95352 703 aa20.89■□□□□ 0.93
NEDD1-208ENST00000555806 CIITAP33076 1130 aa20.89■□□□□ 0.93
NEDD1-208ENST00000555806 AK2P54819 239 aa20.89■□□□□ 0.93
NEDD1-208ENST00000555806 PLEKHG4Q58EX7 1191 aa20.89■□□□□ 0.93
NEDD1-208ENST00000555806 MIS18BP1Q6P0N0 1132 aa20.89■□□□□ 0.93
NEDD1-208ENST00000555806 AIFM3Q96NN9 605 aa20.89■□□□□ 0.93
NEDD1-208ENST00000555806 C22orf23Q9BZE7 217 aa20.89■□□□□ 0.93
NEDD1-208ENST00000555806 POTEB3A0JP26 581 aa20.88■□□□□ 0.93
NEDD1-208ENST00000555806 MBLAC1A4D2B0 266 aaPredicted RBP20.88■□□□□ 0.93
NEDD1-208ENST00000555806 DHX15O43143 795 aaKnown RBP20.88■□□□□ 0.93
NEDD1-208ENST00000555806 PFKFB2O60825 505 aa20.88■□□□□ 0.93
NEDD1-208ENST00000555806 IGFBP4P22692 258 aa20.88■□□□□ 0.93
NEDD1-208ENST00000555806 FAM26DQ5JW98 314 aa20.88■□□□□ 0.93
NEDD1-208ENST00000555806 MARCH8Q5T0T0 291 aa20.88■□□□□ 0.93
NEDD1-208ENST00000555806 FAM117BQ6P1L5 589 aa20.88■□□□□ 0.93
NEDD1-208ENST00000555806 POTEBQ6S5H4 581 aa20.88■□□□□ 0.93
NEDD1-208ENST00000555806 ABHD15Q6UXT9 468 aa20.88■□□□□ 0.93
NEDD1-208ENST00000555806 BLIDQ8IZY5 108 aa20.88■□□□□ 0.93
NEDD1-208ENST00000555806 TRAPPC12Q8WVT3 735 aa20.88■□□□□ 0.93
NEDD1-208ENST00000555806 DNAJB3Q8WWF6 145 aa20.88■□□□□ 0.93
NEDD1-208ENST00000555806 ZBTB10Q96DT7 871 aa20.88■□□□□ 0.93
NEDD1-208ENST00000555806 FAM49AQ9H0Q0 323 aaPredicted RBP20.88■□□□□ 0.93
NEDD1-208ENST00000555806 CERS4Q9HA82 394 aa20.88■□□□□ 0.93
NEDD1-208ENST00000555806 ZNF302Q9NR11 478 aa20.88■□□□□ 0.93
NEDD1-208ENST00000555806 CHD9Q3L8U1 2897 aa20.87■□□□□ 0.93
NEDD1-208ENST00000555806 AMHP03971 560 aa20.87■□□□□ 0.93
NEDD1-208ENST00000555806 SLC26A2P50443 739 aa20.87■□□□□ 0.93
NEDD1-208ENST00000555806 PDXDC2PQ6P474 469 aa20.87■□□□□ 0.93
NEDD1-208ENST00000555806 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.87■□□□□ 0.932e-6■■■■□ 20.9
NEDD1-208ENST00000555806 RPAINQ86UA6 219 aa20.87■□□□□ 0.93
NEDD1-208ENST00000555806 CCDC60Q8IWA6 550 aaPredicted RBP20.87■□□□□ 0.93
NEDD1-208ENST00000555806 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.87■□□□□ 0.93
NEDD1-208ENST00000555806 MYOCDQ8IZQ8 938 aa20.87■□□□□ 0.93
NEDD1-208ENST00000555806 TBCKQ8TEA7 893 aa20.87■□□□□ 0.93
NEDD1-208ENST00000555806 OSBPL7Q9BZF2 842 aa20.87■□□□□ 0.93
NEDD1-208ENST00000555806 STK36Q9NRP7 1315 aa20.86■□□□□ 0.93
NEDD1-208ENST00000555806 IGKV6D-21A0A0A0MT36 114 aa20.86■□□□□ 0.93
NEDD1-208ENST00000555806 GJB5O95377 273 aa20.86■□□□□ 0.93
NEDD1-208ENST00000555806 CHRNA1P02708 482 aa20.86■□□□□ 0.93
NEDD1-208ENST00000555806 GHRP10912 638 aa20.86■□□□□ 0.93
NEDD1-208ENST00000555806 USP11P51784 963 aa20.86■□□□□ 0.93
NEDD1-208ENST00000555806 KRT76Q01546 638 aa20.86■□□□□ 0.93
NEDD1-208ENST00000555806 ADGRE1Q14246 886 aa20.86■□□□□ 0.93
NEDD1-208ENST00000555806 GALNT17Q6IS24 598 aa20.86■□□□□ 0.93
NEDD1-208ENST00000555806 ZNF746Q6NUN9 644 aaPredicted RBP20.86■□□□□ 0.93
NEDD1-208ENST00000555806 SWSAP1Q6NVH7 229 aa20.86■□□□□ 0.93
NEDD1-208ENST00000555806 CKAP2LQ8IYA6 745 aa20.86■□□□□ 0.93
NEDD1-208ENST00000555806 FAM177A1Q8N128 213 aaPredicted RBP20.86■□□□□ 0.93
NEDD1-208ENST00000555806 DAGLBQ8NCG7 672 aa20.86■□□□□ 0.93
NEDD1-208ENST00000555806 PPM1EQ8WY54 764 aa20.86■□□□□ 0.93
NEDD1-208ENST00000555806 APBB2Q92870 758 aa20.86■□□□□ 0.93
NEDD1-208ENST00000555806 LENG9Q96B70 501 aa20.86■□□□□ 0.93
NEDD1-208ENST00000555806 IFIH1Q9BYX4 1025 aaKnown RBP20.86■□□□□ 0.93
NEDD1-208ENST00000555806 KCNJ14Q9UNX9 436 aa20.86■□□□□ 0.93
NEDD1-208ENST00000555806 SAMM50Q9Y512 469 aa20.86■□□□□ 0.93
NEDD1-208ENST00000555806 MICAL3Q7RTP6 2002 aa20.86■□□□□ 0.93
NEDD1-208ENST00000555806 LCHNA4D1U4 455 aa20.85■□□□□ 0.93
NEDD1-208ENST00000555806 HBP1O60381 514 aa20.85■□□□□ 0.93
NEDD1-208ENST00000555806 DTNBO60941 627 aa20.85■□□□□ 0.93
NEDD1-208ENST00000555806 ARHGEF15O94989 841 aa20.85■□□□□ 0.93
NEDD1-208ENST00000555806 SEC24BO95487 1268 aa20.85■□□□□ 0.93
NEDD1-208ENST00000555806 RPLP2P05387 115 aaKnown RBP20.85■□□□□ 0.93
NEDD1-208ENST00000555806 XBP1P17861 261 aa20.85■□□□□ 0.93
NEDD1-208ENST00000555806 MRPS6P82932 125 aaKnown RBP20.85■□□□□ 0.93
NEDD1-208ENST00000555806 TAP1Q03518 808 aa20.85■□□□□ 0.93
NEDD1-208ENST00000555806 MGAT3Q09327 533 aa20.85■□□□□ 0.93
NEDD1-208ENST00000555806 SMAP1Q8IYB5 467 aaPredicted RBP20.85■□□□□ 0.93
NEDD1-208ENST00000555806 ATP8B4Q8TF62 1192 aa20.85■□□□□ 0.93
NEDD1-208ENST00000555806 ARNTL2Q8WYA1 636 aa20.85■□□□□ 0.93
NEDD1-208ENST00000555806 CDY2AQ9Y6F7 541 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms