RNA–Protein interactions for RNA: ENST00000555778.1

SDR39U1-214, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 608 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-214ENST00000555778 ADAM17P78536 824 aa15.68■□□□□ 0.1
SDR39U1-214ENST00000555778 STK3Q13188 491 aa15.68■□□□□ 0.1
SDR39U1-214ENST00000555778 TOB2Q14106 344 aaPredicted RBP15.68■□□□□ 0.1
SDR39U1-214ENST00000555778 SKIV2LQ15477 1246 aaKnown RBP15.68■□□□□ 0.1
SDR39U1-214ENST00000555778 CEP55Q53EZ4 464 aa15.68■□□□□ 0.1
SDR39U1-214ENST00000555778 PLEKHG4Q58EX7 1191 aa15.68■□□□□ 0.1
SDR39U1-214ENST00000555778 ERAP1Q9NZ08 941 aa15.68■□□□□ 0.1
SDR39U1-214ENST00000555778 THEGQ9P2T0 379 aa15.68■□□□□ 0.1
SDR39U1-214ENST00000555778 NRCAMQ92823 1304 aa15.68■□□□□ 0.1
SDR39U1-214ENST00000555778 ATG2AQ2TAZ0 1938 aa15.67■□□□□ 0.1
SDR39U1-214ENST00000555778 CCDC196A0A1B0GTZ2 297 aa15.67■□□□□ 0.1
SDR39U1-214ENST00000555778 LINC01553A4QN01 128 aa15.67■□□□□ 0.1
SDR39U1-214ENST00000555778 UPP2O95045 317 aa15.67■□□□□ 0.1
SDR39U1-214ENST00000555778 CCNE2O96020 404 aa15.67■□□□□ 0.1
SDR39U1-214ENST00000555778 FOSP01100 380 aaPredicted RBP15.67■□□□□ 0.1
SDR39U1-214ENST00000555778 PSMA5P28066 241 aa15.67■□□□□ 0.1
SDR39U1-214ENST00000555778 CACNB1Q02641 598 aaPredicted RBP15.67■□□□□ 0.1
SDR39U1-214ENST00000555778 TMEM62Q0P6H9 643 aa15.67■□□□□ 0.1
SDR39U1-214ENST00000555778 GRB10Q13322 594 aa15.67■□□□□ 0.1
SDR39U1-214ENST00000555778 MKRN4PQ13434 485 aaPredicted RBP15.67■□□□□ 0.1
SDR39U1-214ENST00000555778 PLA2G4DQ86XP0 818 aa15.67■□□□□ 0.1
SDR39U1-214ENST00000555778 REXO1Q8N1G1 1221 aaKnown RBP15.67■□□□□ 0.1
SDR39U1-214ENST00000555778 DNAJB3Q8WWF6 145 aa15.67■□□□□ 0.1
SDR39U1-214ENST00000555778 SEPT8Q92599 483 aa15.67■□□□□ 0.1
SDR39U1-214ENST00000555778 CHRNA1P02708 482 aa15.66■□□□□ 0.1
SDR39U1-214ENST00000555778 AMHP03971 560 aa15.66■□□□□ 0.1
SDR39U1-214ENST00000555778 INSRRP14616 1297 aa15.66■□□□□ 0.1
SDR39U1-214ENST00000555778 PDIA3P30101 505 aaKnown RBP15.66■□□□□ 0.1
SDR39U1-214ENST00000555778 TFF2Q03403 129 aa15.66■□□□□ 0.1
SDR39U1-214ENST00000555778 PLCB4Q15147 1175 aa15.66■□□□□ 0.1
SDR39U1-214ENST00000555778 NTRK3Q16288 839 aa15.66■□□□□ 0.1
SDR39U1-214ENST00000555778 MARCH8Q5T0T0 291 aa15.66■□□□□ 0.1
SDR39U1-214ENST00000555778 RUFY3Q7L099 469 aa15.66■□□□□ 0.1
SDR39U1-214ENST00000555778 TRMT1LQ7Z2T5 733 aaKnown RBP15.66■□□□□ 0.1
SDR39U1-214ENST00000555778 C17orf80Q9BSJ5 609 aa15.66■□□□□ 0.1
SDR39U1-214ENST00000555778 AGXT2Q9BYV1 514 aa15.66■□□□□ 0.1
SDR39U1-214ENST00000555778 IFIH1Q9BYX4 1025 aaKnown RBP15.66■□□□□ 0.1
SDR39U1-214ENST00000555778 SMARCAD1Q9H4L7 1026 aa15.66■□□□□ 0.1
SDR39U1-214ENST00000555778 AZI2Q9H6S1 392 aa15.66■□□□□ 0.1
SDR39U1-214ENST00000555778 MTCH2Q9Y6C9 303 aa15.66■□□□□ 0.1
SDR39U1-214ENST00000555778 WDR81Q562E7 1941 aa15.66■□□□□ 0.1
SDR39U1-214ENST00000555778 KIAA1671Q9BY89 1806 aa15.66■□□□□ 0.1
SDR39U1-214ENST00000555778 NFASCO94856 1347 aa15.66■□□□□ 0.1
SDR39U1-214ENST00000555778 COL4A6Q14031 1691 aa15.65■□□□□ 0.1
SDR39U1-214ENST00000555778 IGLV3-22A0A075B6J6 115 aa15.65■□□□□ 0.1
SDR39U1-214ENST00000555778 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.65■□□□□ 0.1
SDR39U1-214ENST00000555778 MEIS1O00470 390 aa15.65■□□□□ 0.1
SDR39U1-214ENST00000555778 BACH1O14867 736 aa15.65■□□□□ 0.1
SDR39U1-214ENST00000555778 PRPF3O43395 683 aaKnown RBP15.65■□□□□ 0.1
SDR39U1-214ENST00000555778 GTPBP6O43824 516 aaPredicted RBP15.65■□□□□ 0.1
SDR39U1-214ENST00000555778 CAND2O75155 1236 aa15.65■□□□□ 0.1
SDR39U1-214ENST00000555778 IBSPP21815 317 aaPredicted RBP15.65■□□□□ 0.1
SDR39U1-214ENST00000555778 AKAP17AQ02040 695 aaKnown RBP15.65■□□□□ 0.1
SDR39U1-214ENST00000555778 MGAT3Q09327 533 aa15.65■□□□□ 0.1
SDR39U1-214ENST00000555778 CCDC60Q8IWA6 550 aaPredicted RBP15.65■□□□□ 0.1
SDR39U1-214ENST00000555778 AIFM3Q96NN9 605 aa15.65■□□□□ 0.1
SDR39U1-214ENST00000555778 PPP1R16BQ96T49 567 aa15.65■□□□□ 0.1
SDR39U1-214ENST00000555778 ZMYND12Q9H0C1 365 aa15.65■□□□□ 0.1
SDR39U1-214ENST00000555778 C6orf50Q9HD87 102 aa15.65■□□□□ 0.1
SDR39U1-214ENST00000555778 CYP46A1Q9Y6A2 500 aa15.65■□□□□ 0.1
SDR39U1-214ENST00000555778 CDY2AQ9Y6F7 541 aa15.65■□□□□ 0.1
SDR39U1-214ENST00000555778 TCF20Q9UGU0 1960 aaKnown RBP15.65■□□□□ 0.1
SDR39U1-214ENST00000555778 ESYT2A0FGR8 921 aa15.64■□□□□ 0.09
SDR39U1-214ENST00000555778 LPXNO60711 386 aa15.64■□□□□ 0.09
SDR39U1-214ENST00000555778 EFCAB14O75071 495 aa15.64■□□□□ 0.09
SDR39U1-214ENST00000555778 CSPG5O95196 566 aa15.64■□□□□ 0.09
SDR39U1-214ENST00000555778 LPIN1Q14693 890 aa15.64■□□□□ 0.09
SDR39U1-214ENST00000555778 PRR16Q569H4 304 aa15.64■□□□□ 0.09
SDR39U1-214ENST00000555778 TJAP1Q5JTD0 557 aa15.64■□□□□ 0.09
SDR39U1-214ENST00000555778 CCDC12Q8WUD4 166 aaPredicted RBP15.64■□□□□ 0.09
SDR39U1-214ENST00000555778 YME1L1Q96TA2 773 aa15.64■□□□□ 0.09
SDR39U1-214ENST00000555778 RAD9AQ99638 391 aa15.64■□□□□ 0.09
SDR39U1-214ENST00000555778 ZNF577Q9BSK1 485 aa15.64■□□□□ 0.09
SDR39U1-214ENST00000555778 ZSWIM6Q9HCJ5 1215 aa15.64■□□□□ 0.09
SDR39U1-214ENST00000555778 MYH9P35579 1960 aaKnown RBP15.64■□□□□ 0.09
SDR39U1-214ENST00000555778 RALGAPA2Q2PPJ7 1873 aa15.63■□□□□ 0.09
SDR39U1-214ENST00000555778 MBLAC1A4D2B0 266 aaPredicted RBP15.63■□□□□ 0.09
SDR39U1-214ENST00000555778 IPO5O00410 1097 aaKnown RBP15.63■□□□□ 0.09
SDR39U1-214ENST00000555778 MAFGO15525 162 aa15.63■□□□□ 0.09
SDR39U1-214ENST00000555778 IFNAR1P17181 557 aa15.63■□□□□ 0.09
SDR39U1-214ENST00000555778 STAT5BP51692 787 aa15.63■□□□□ 0.09
SDR39U1-214ENST00000555778 MRPS6P82932 125 aaKnown RBP15.63■□□□□ 0.09
SDR39U1-214ENST00000555778 FAM26DQ5JW98 314 aa15.63■□□□□ 0.09
SDR39U1-214ENST00000555778 TAF2Q6P1X5 1199 aa15.63■□□□□ 0.09
SDR39U1-214ENST00000555778 CCDC148Q8NFR7 591 aa15.63■□□□□ 0.09
SDR39U1-214ENST00000555778 CRYGNQ8WXF5 182 aa15.63■□□□□ 0.09
SDR39U1-214ENST00000555778 GJA10Q969M2 543 aa15.63■□□□□ 0.09
SDR39U1-214ENST00000555778 TGS1Q96RS0 853 aaKnown RBP15.63■□□□□ 0.09
SDR39U1-214ENST00000555778 RNF26Q9BY78 433 aaPredicted RBP15.63■□□□□ 0.09
SDR39U1-214ENST00000555778 GLT8D2Q9H1C3 349 aa15.63■□□□□ 0.09
SDR39U1-214ENST00000555778 EVPLQ92817 2033 aa15.62■□□□□ 0.09
SDR39U1-214ENST00000555778 POTEB3A0JP26 581 aa15.62■□□□□ 0.09
SDR39U1-214ENST00000555778 CHMP2AO43633 222 aa15.62■□□□□ 0.09
SDR39U1-214ENST00000555778 CD52P31358 61 aa15.62■□□□□ 0.09
SDR39U1-214ENST00000555778 FBXO47Q5MNV8 452 aa15.62■□□□□ 0.09
SDR39U1-214ENST00000555778 PDXDC2PQ6P474 469 aa15.62■□□□□ 0.09
SDR39U1-214ENST00000555778 POTEBQ6S5H4 581 aa15.62■□□□□ 0.09
SDR39U1-214ENST00000555778 NIPA1Q7RTP0 329 aa15.62■□□□□ 0.09
SDR39U1-214ENST00000555778 RSPH3Q86UC2 560 aa15.62■□□□□ 0.09
SDR39U1-214ENST00000555778 FBXL16Q8N461 479 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms