RNA–Protein interactions for RNA: ENST00000555563.5

SHMT2-219, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-219ENST00000555563 CYP3A7-CYP3A51PA0A087WV96 503 aa15.54■□□□□ 0.08
SHMT2-219ENST00000555563 IGKV6D-21A0A0A0MT36 114 aa15.54■□□□□ 0.08
SHMT2-219ENST00000555563 FAM205CA6NFA0 338 aa15.54■□□□□ 0.08
SHMT2-219ENST00000555563 BACH1O14867 736 aa15.54■□□□□ 0.08
SHMT2-219ENST00000555563 ST18O60284 1047 aa15.54■□□□□ 0.08
SHMT2-219ENST00000555563 CD2BP2O95400 341 aaKnown RBP15.54■□□□□ 0.08
SHMT2-219ENST00000555563 MMP1P03956 469 aa15.54■□□□□ 0.08
SHMT2-219ENST00000555563 PFKMP08237 780 aa15.54■□□□□ 0.08
SHMT2-219ENST00000555563 GNAT1P11488 350 aa15.54■□□□□ 0.08
SHMT2-219ENST00000555563 CYP3A7P24462 503 aa15.54■□□□□ 0.08
SHMT2-219ENST00000555563 THPOP40225 353 aa15.54■□□□□ 0.08
SHMT2-219ENST00000555563 STAT5BP51692 787 aa15.54■□□□□ 0.08
SHMT2-219ENST00000555563 KRT76Q01546 638 aa15.54■□□□□ 0.08
SHMT2-219ENST00000555563 PLCB4Q15147 1175 aa15.54■□□□□ 0.08
SHMT2-219ENST00000555563 GRIK4Q16099 956 aa15.54■□□□□ 0.08
SHMT2-219ENST00000555563 LETM2Q2VYF4 491 aa15.54■□□□□ 0.08
SHMT2-219ENST00000555563 Q4G0T1 1027 aa15.54■□□□□ 0.08
SHMT2-219ENST00000555563 EARS2Q5JPH6 523 aaKnown RBP15.54■□□□□ 0.08
SHMT2-219ENST00000555563 ZNF618Q5T7W0 954 aa15.54■□□□□ 0.08
SHMT2-219ENST00000555563 KRT40Q6A162 431 aa15.54■□□□□ 0.08
SHMT2-219ENST00000555563 FAM109BQ6ICB4 259 aaPredicted RBP15.54■□□□□ 0.08
SHMT2-219ENST00000555563 ZNF746Q6NUN9 644 aaPredicted RBP15.54■□□□□ 0.08
SHMT2-219ENST00000555563 MIS18BP1Q6P0N0 1132 aa15.54■□□□□ 0.08
SHMT2-219ENST00000555563 TRAF7Q6Q0C0 670 aa15.54■□□□□ 0.08
SHMT2-219ENST00000555563 PLPPR4Q7Z2D5 763 aa15.54■□□□□ 0.08
SHMT2-219ENST00000555563 NEK8Q86SG6 692 aa15.54■□□□□ 0.08
SHMT2-219ENST00000555563 SLC5A5Q92911 643 aa15.54■□□□□ 0.08
SHMT2-219ENST00000555563 TNFRSF25Q93038 417 aa15.54■□□□□ 0.08
SHMT2-219ENST00000555563 GJA10Q969M2 543 aa15.54■□□□□ 0.08
SHMT2-219ENST00000555563 BRMS1Q9HCU9 246 aa15.54■□□□□ 0.08
SHMT2-219ENST00000555563 MTMR10Q9NXD2 777 aa15.54■□□□□ 0.08
SHMT2-219ENST00000555563 CXXC1Q9P0U4 656 aaPredicted RBP15.54■□□□□ 0.08
SHMT2-219ENST00000555563 DDX25Q9UHL0 483 aaKnown RBP15.54■□□□□ 0.08
SHMT2-219ENST00000555563 TCEAL9Q9UHQ7 104 aa15.54■□□□□ 0.08
SHMT2-219ENST00000555563 TRPC6Q9Y210 931 aa15.54■□□□□ 0.08
SHMT2-219ENST00000555563 RBAK-RBAKDNI3L0D1 243 aa15.53■□□□□ 0.08
SHMT2-219ENST00000555563 SLC37A4O43826 429 aa15.53■□□□□ 0.08
SHMT2-219ENST00000555563 GAS7O60861 476 aa15.53■□□□□ 0.08
SHMT2-219ENST00000555563 FGBP02675 491 aa15.53■□□□□ 0.08
SHMT2-219ENST00000555563 TRIM29Q14134 588 aa15.53■□□□□ 0.08
SHMT2-219ENST00000555563 GPNMBQ14956 572 aa15.53■□□□□ 0.08
SHMT2-219ENST00000555563 LRCH2Q5VUJ6 765 aa15.53■□□□□ 0.08
SHMT2-219ENST00000555563 SMAP1Q8IYB5 467 aaPredicted RBP15.53■□□□□ 0.08
SHMT2-219ENST00000555563 ETNPPLQ8TBG4 499 aa15.53■□□□□ 0.08
SHMT2-219ENST00000555563 RIT2Q99578 217 aa15.53■□□□□ 0.08
SHMT2-219ENST00000555563 MTIF3Q9H2K0 278 aaKnown RBP15.53■□□□□ 0.08
SHMT2-219ENST00000555563 TUBE1Q9UJT0 475 aa15.53■□□□□ 0.08
SHMT2-219ENST00000555563 IGSF9BQ9UPX0 1349 aa15.52■□□□□ 0.08
SHMT2-219ENST00000555563 MBLAC1A4D2B0 266 aaPredicted RBP15.52■□□□□ 0.08
SHMT2-219ENST00000555563 CHMP2AO43633 222 aa15.52■□□□□ 0.08
SHMT2-219ENST00000555563 NBNO60934 754 aa15.52■□□□□ 0.08
SHMT2-219ENST00000555563 INSRRP14616 1297 aa15.52■□□□□ 0.08
SHMT2-219ENST00000555563 IGBP1P78318 339 aa15.52■□□□□ 0.08
SHMT2-219ENST00000555563 HMGN5P82970 282 aaKnown RBP15.52■□□□□ 0.08
SHMT2-219ENST00000555563 SMAD3P84022 425 aaKnown RBP15.52■□□□□ 0.08
SHMT2-219ENST00000555563 MBTPS1Q14703 1052 aa15.52■□□□□ 0.08
SHMT2-219ENST00000555563 MARCH8Q5T0T0 291 aa15.52■□□□□ 0.08
SHMT2-219ENST00000555563 FAM160B1Q5W0V3 765 aa15.52■□□□□ 0.08
SHMT2-219ENST00000555563 PDXDC2PQ6P474 469 aa15.52■□□□□ 0.08
SHMT2-219ENST00000555563 RUFY4Q6ZNE9 571 aa15.52■□□□□ 0.08
SHMT2-219ENST00000555563 DIS3L2Q8IYB7 885 aaKnown RBP15.52■□□□□ 0.08
SHMT2-219ENST00000555563 TRAPPC12Q8WVT3 735 aa15.52■□□□□ 0.08
SHMT2-219ENST00000555563 ZBTB10Q96DT7 871 aa15.52■□□□□ 0.08
SHMT2-219ENST00000555563 TEKT3Q9BXF9 490 aa15.52■□□□□ 0.08
SHMT2-219ENST00000555563 FTOQ9C0B1 505 aaKnown RBP eCLIP15.52■□□□□ 0.08
SHMT2-219ENST00000555563 ZNF302Q9NR11 478 aa15.52■□□□□ 0.08
SHMT2-219ENST00000555563 SIP14410 1827 aa15.52■□□□□ 0.07
SHMT2-219ENST00000555563 POTEB3A0JP26 581 aa15.51■□□□□ 0.07
SHMT2-219ENST00000555563 WDR64B1ANS9 1081 aa15.51■□□□□ 0.07
SHMT2-219ENST00000555563 BTBD18B2RXH4 712 aa15.51■□□□□ 0.07
SHMT2-219ENST00000555563 CAND2O75155 1236 aa15.51■□□□□ 0.07
SHMT2-219ENST00000555563 PSMD10O75832 226 aa15.51■□□□□ 0.07
SHMT2-219ENST00000555563 PARNO95453 639 aaKnown RBP15.51■□□□□ 0.07
SHMT2-219ENST00000555563 CXCL10P02778 98 aa15.51■□□□□ 0.07
SHMT2-219ENST00000555563 PSAPP07602 524 aa15.51■□□□□ 0.07
SHMT2-219ENST00000555563 CTSHP09668 335 aa15.51■□□□□ 0.07
SHMT2-219ENST00000555563 GCFC2P16383 781 aaKnown RBP15.51■□□□□ 0.07
SHMT2-219ENST00000555563 SLC26A2P50443 739 aa15.51■□□□□ 0.07
SHMT2-219ENST00000555563 GUCY1B3Q02153 619 aa15.51■□□□□ 0.07
SHMT2-219ENST00000555563 PPP4R3AQ6IN85 833 aa15.51■□□□□ 0.07
SHMT2-219ENST00000555563 SWSAP1Q6NVH7 229 aa15.51■□□□□ 0.07
SHMT2-219ENST00000555563 TAF2Q6P1X5 1199 aa15.51■□□□□ 0.07
SHMT2-219ENST00000555563 POTEBQ6S5H4 581 aa15.51■□□□□ 0.07
SHMT2-219ENST00000555563 TET1Q8NFU7 2136 aa15.51■□□□□ 0.07
SHMT2-219ENST00000555563 ATP8B4Q8TF62 1192 aa15.51■□□□□ 0.07
SHMT2-219ENST00000555563 C8orf76Q96K31 380 aa15.51■□□□□ 0.07
SHMT2-219ENST00000555563 BACH2Q9BYV9 841 aa15.51■□□□□ 0.07
SHMT2-219ENST00000555563 UNC45AQ9H3U1 944 aa15.51■□□□□ 0.07
SHMT2-219ENST00000555563 SAMM50Q9Y512 469 aa15.51■□□□□ 0.07
SHMT2-219ENST00000555563 PCDHA10Q9Y5I2 948 aa15.51■□□□□ 0.07
SHMT2-219ENST00000555563 KAT6AQ92794 2004 aa15.51■□□□□ 0.07
SHMT2-219ENST00000555563 WDR81Q562E7 1941 aa15.51■□□□□ 0.07
SHMT2-219ENST00000555563 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.5■□□□□ 0.07
SHMT2-219ENST00000555563 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.5■□□□□ 0.07
SHMT2-219ENST00000555563 RRN3P2A6NIE6 340 aa15.5■□□□□ 0.07
SHMT2-219ENST00000555563 ZBBXA8MT70 800 aa15.5■□□□□ 0.07
SHMT2-219ENST00000555563 GRXCR1A8MXD5 290 aa15.5■□□□□ 0.07
SHMT2-219ENST00000555563 RSPH10B2B2RC85 870 aa15.5■□□□□ 0.07
SHMT2-219ENST00000555563 CCNT1O60563 726 aaKnown RBP15.5■□□□□ 0.07
SHMT2-219ENST00000555563 RSPH10BP0C881 870 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms