RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 CCDC192P0DO97 292 aa11.41□□□□□ -0.58
SRP54-208ENST00000555557 SFNP31947 248 aa11.41□□□□□ -0.58
SRP54-208ENST00000555557 SARSP49591 514 aaKnown RBP11.41□□□□□ -0.58
SRP54-208ENST00000555557 FLT3LGP49771 235 aa11.41□□□□□ -0.58
SRP54-208ENST00000555557 PRKCZQ05513 592 aa11.41□□□□□ -0.58
SRP54-208ENST00000555557 CELF3Q5SZQ8 465 aaKnown RBP11.41□□□□□ -0.58
SRP54-208ENST00000555557 SWSAP1Q6NVH7 229 aa11.41□□□□□ -0.58
SRP54-208ENST00000555557 ABHD15Q6UXT9 468 aa11.41□□□□□ -0.58
SRP54-208ENST00000555557 DYMQ7RTS9 669 aa11.41□□□□□ -0.58
SRP54-208ENST00000555557 CD99L2Q8TCZ2 262 aa11.41□□□□□ -0.58
SRP54-208ENST00000555557 SCFD2Q8WU76 684 aa11.41□□□□□ -0.58
SRP54-208ENST00000555557 APBA2Q99767 749 aa11.41□□□□□ -0.58
SRP54-208ENST00000555557 SH2D3AQ9BRG2 576 aa11.41□□□□□ -0.58
SRP54-208ENST00000555557 CFHR5Q9BXR6 569 aa11.41□□□□□ -0.58
SRP54-208ENST00000555557 BHMT2Q9H2M3 363 aa11.41□□□□□ -0.58
SRP54-208ENST00000555557 ABHD16BQ9H3Z7 469 aa11.41□□□□□ -0.58
SRP54-208ENST00000555557 TSPY26PQ9H489 355 aa11.41□□□□□ -0.58
SRP54-208ENST00000555557 VTA1Q9NP79 307 aa11.41□□□□□ -0.58
SRP54-208ENST00000555557 GABBR1Q9UBS5 961 aa11.41□□□□□ -0.58
SRP54-208ENST00000555557 TSKSQ9UJT2 592 aa11.41□□□□□ -0.58
SRP54-208ENST00000555557 MAN1B1Q9UKM7 699 aa11.41□□□□□ -0.58
SRP54-208ENST00000555557 SYNGAP1Q96PV0 1343 aa11.4□□□□□ -0.58
SRP54-208ENST00000555557 ZSWIM8A7E2V4 1837 aa11.4□□□□□ -0.58
SRP54-208ENST00000555557 PLXNA1Q9UIW2 1896 aa11.4□□□□□ -0.58
SRP54-208ENST00000555557 NPHP3-ACAD11A0A0J9YXS1 232 aa11.4□□□□□ -0.58
SRP54-208ENST00000555557 TMEM150BA6NC51 233 aa11.4□□□□□ -0.58
SRP54-208ENST00000555557 GPR25O00155 361 aa11.4□□□□□ -0.58
SRP54-208ENST00000555557 QARSP47897 775 aaKnown RBP11.4□□□□□ -0.58
SRP54-208ENST00000555557 SLC12A3P55017 1021 aa11.4□□□□□ -0.58
SRP54-208ENST00000555557 RAD51AP2Q09MP3 1159 aa11.4□□□□□ -0.58
SRP54-208ENST00000555557 HSDL1Q3SXM5 330 aa11.4□□□□□ -0.58
SRP54-208ENST00000555557 KCNV1Q6PIU1 500 aa11.4□□□□□ -0.58
SRP54-208ENST00000555557 METTL7BQ6UX53 244 aa11.4□□□□□ -0.58
SRP54-208ENST00000555557 CCDC60Q8IWA6 550 aaPredicted RBP11.4□□□□□ -0.58
SRP54-208ENST00000555557 DHX37Q8IY37 1157 aaKnown RBP11.4□□□□□ -0.58
SRP54-208ENST00000555557 SMAP1Q8IYB5 467 aaPredicted RBP11.4□□□□□ -0.58
SRP54-208ENST00000555557 SPATA20Q8TB22 786 aa11.4□□□□□ -0.58
SRP54-208ENST00000555557 TRIM9Q9C026 710 aa11.4□□□□□ -0.58
SRP54-208ENST00000555557 ZSWIM4Q9H7M6 989 aa11.4□□□□□ -0.58
SRP54-208ENST00000555557 POLD4Q9HCU8 107 aa11.4□□□□□ -0.58
SRP54-208ENST00000555557 LRRC37A2A6NM11 1700 aa11.4□□□□□ -0.59
SRP54-208ENST00000555557 DOCK5Q9H7D0 1870 aa11.39□□□□□ -0.59
SRP54-208ENST00000555557 GSTTP1A0A1W2PQM5 241 aa11.39□□□□□ -0.59
SRP54-208ENST00000555557 BACH1O14867 736 aa11.39□□□□□ -0.59
SRP54-208ENST00000555557 ADCY6O43306 1168 aa11.39□□□□□ -0.59
SRP54-208ENST00000555557 SLC26A4O43511 780 aa11.39□□□□□ -0.59
SRP54-208ENST00000555557 PSAPP07602 524 aa11.39□□□□□ -0.59
SRP54-208ENST00000555557 BMP6P22004 513 aa11.39□□□□□ -0.59
SRP54-208ENST00000555557 CACNB1Q02641 598 aaPredicted RBP11.39□□□□□ -0.59
SRP54-208ENST00000555557 KIF22Q14807 665 aa11.39□□□□□ -0.59
SRP54-208ENST00000555557 DPCR1Q3MIW9 517 aa11.39□□□□□ -0.59
SRP54-208ENST00000555557 CCDC144BQ3MJ40 725 aa11.39□□□□□ -0.59
SRP54-208ENST00000555557 ANO6Q4KMQ2 910 aa11.39□□□□□ -0.59
SRP54-208ENST00000555557 UTP14CQ5TAP6 766 aaKnown RBP11.39□□□□□ -0.59
SRP54-208ENST00000555557 NT5DC1Q5TFE4 455 aa11.39□□□□□ -0.59
SRP54-208ENST00000555557 RNF214Q8ND24 703 aa11.39□□□□□ -0.59
SRP54-208ENST00000555557 GIMAP8Q8ND71 665 aaPredicted RBP11.39□□□□□ -0.59
SRP54-208ENST00000555557 DDX12PQ92771 950 aa11.39□□□□□ -0.59
SRP54-208ENST00000555557 SPATA33Q96N06 139 aa11.39□□□□□ -0.59
SRP54-208ENST00000555557 NACC1Q96RE7 527 aa11.39□□□□□ -0.59
SRP54-208ENST00000555557 C7orf25Q9BPX7 421 aa11.39□□□□□ -0.59
SRP54-208ENST00000555557 RBSNQ9H1K0 784 aa11.39□□□□□ -0.59
SRP54-208ENST00000555557 DNAJC25Q9H1X3 360 aa11.39□□□□□ -0.59
SRP54-208ENST00000555557 MAGEF1Q9HAY2 307 aa11.39□□□□□ -0.59
SRP54-208ENST00000555557 RTN4Q9NQC3 1192 aaKnown RBP11.39□□□□□ -0.59
SRP54-208ENST00000555557 RBM47A0AV96 593 aaKnown RBP11.39□□□□□ -0.59
SRP54-208ENST00000555557 ZNF862O60290 1169 aa11.39□□□□□ -0.59
SRP54-208ENST00000555557 SMC2O95347 1197 aa11.39□□□□□ -0.59
SRP54-208ENST00000555557 ATG7O95352 703 aa11.39□□□□□ -0.59
SRP54-208ENST00000555557 EYA4O95677 639 aa11.39□□□□□ -0.59
SRP54-208ENST00000555557 RPN1P04843 607 aaKnown RBP11.39□□□□□ -0.59
SRP54-208ENST00000555557 SUPT20HL2P0C7V6 817 aa11.39□□□□□ -0.59
SRP54-208ENST00000555557 SMPD1P17405 629 aa11.39□□□□□ -0.59
SRP54-208ENST00000555557 PSMC5P62195 406 aa11.39□□□□□ -0.59
SRP54-208ENST00000555557 ASIC1P78348 528 aa11.39□□□□□ -0.59
SRP54-208ENST00000555557 AMPD3Q01432 767 aa11.39□□□□□ -0.59
SRP54-208ENST00000555557 ARSHQ5FYA8 562 aa11.39□□□□□ -0.59
SRP54-208ENST00000555557 MIS18BP1Q6P0N0 1132 aa11.39□□□□□ -0.59
SRP54-208ENST00000555557 C11orf57Q6ZUT1 292 aaPredicted RBP11.39□□□□□ -0.59
SRP54-208ENST00000555557 GPBP1Q86WP2 473 aa11.39□□□□□ -0.59
SRP54-208ENST00000555557 MSL3Q8N5Y2 521 aaKnown RBP11.39□□□□□ -0.59
SRP54-208ENST00000555557 SYT2Q8N9I0 419 aaPredicted RBP11.39□□□□□ -0.59
SRP54-208ENST00000555557 RDM1Q8NG50 284 aa11.39□□□□□ -0.59
SRP54-208ENST00000555557 NEK9Q8TD19 979 aa11.39□□□□□ -0.59
SRP54-208ENST00000555557 KLRC4O43908 158 aa11.38□□□□□ -0.59
SRP54-208ENST00000555557 IGHA2P01877 340 aa11.38□□□□□ -0.59
SRP54-208ENST00000555557 ZNF865P0CJ78 1059 aaPredicted RBP11.38□□□□□ -0.59
SRP54-208ENST00000555557 CYP11B2P19099 503 aa11.38□□□□□ -0.59
SRP54-208ENST00000555557 YWHABP31946 246 aaKnown RBP11.38□□□□□ -0.59
SRP54-208ENST00000555557 TCF7P36402 384 aaPredicted RBP11.38□□□□□ -0.59
SRP54-208ENST00000555557 NLRP12P59046 1061 aa11.38□□□□□ -0.59
SRP54-208ENST00000555557 ARHGAP1Q07960 439 aa11.38□□□□□ -0.59
SRP54-208ENST00000555557 STX1AQ16623 288 aa11.38□□□□□ -0.59
SRP54-208ENST00000555557 KMT5BQ4FZB7 885 aa11.38□□□□□ -0.59
SRP54-208ENST00000555557 COL13A1Q5TAT6 717 aaPredicted RBP11.38□□□□□ -0.59
SRP54-208ENST00000555557 OLFML2BQ68BL8 750 aa11.38□□□□□ -0.59
SRP54-208ENST00000555557 SMYD4Q8IYR2 804 aaPredicted RBP11.38□□□□□ -0.59
SRP54-208ENST00000555557 ZNF296Q8WUU4 475 aaPredicted RBP11.38□□□□□ -0.59
SRP54-208ENST00000555557 SEPT1Q8WYJ6 367 aa11.38□□□□□ -0.59
SRP54-208ENST00000555557 TRIB2Q92519 343 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms