RNA–Protein interactions for RNA: ENST00000555269.5

TRAPPC6B-205, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best)

Gene TRAPPC6B, Length 1,000 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-205ENST00000555269 SWSAP1Q6NVH7 229 aa14.09□□□□□ -0.15
TRAPPC6B-205ENST00000555269 TRAF7Q6Q0C0 670 aa14.09□□□□□ -0.15
TRAPPC6B-205ENST00000555269 SERINC5Q86VE9 423 aa14.09□□□□□ -0.15
TRAPPC6B-205ENST00000555269 HERVK_113Q902F9 699 aa14.09□□□□□ -0.15
TRAPPC6B-205ENST00000555269 WASF1Q92558 559 aa14.09□□□□□ -0.15
TRAPPC6B-205ENST00000555269 FTOQ9C0B1 505 aaKnown RBP eCLIP14.09□□□□□ -0.15
TRAPPC6B-205ENST00000555269 FAM205CA6NFA0 338 aa14.08□□□□□ -0.16
TRAPPC6B-205ENST00000555269 INSRRP14616 1297 aa14.08□□□□□ -0.16
TRAPPC6B-205ENST00000555269 XBP1P17861 261 aa14.08□□□□□ -0.16
TRAPPC6B-205ENST00000555269 THPOP40225 353 aa14.08□□□□□ -0.16
TRAPPC6B-205ENST00000555269 IGBP1P78318 339 aa14.08□□□□□ -0.16
TRAPPC6B-205ENST00000555269 NR5A1Q13285 461 aa14.08□□□□□ -0.16
TRAPPC6B-205ENST00000555269 PLCB4Q15147 1175 aa14.08□□□□□ -0.16
TRAPPC6B-205ENST00000555269 NONOQ15233 471 aaKnown RBP eCLIP14.08□□□□□ -0.16
TRAPPC6B-205ENST00000555269 TCTN1Q2MV58 587 aa14.08□□□□□ -0.16
TRAPPC6B-205ENST00000555269 MARCH8Q5T0T0 291 aa14.08□□□□□ -0.16
TRAPPC6B-205ENST00000555269 RUFY4Q6ZNE9 571 aa14.08□□□□□ -0.16
TRAPPC6B-205ENST00000555269 PIK3AP1Q6ZUJ8 805 aa14.08□□□□□ -0.16
TRAPPC6B-205ENST00000555269 KRT25Q7Z3Z0 450 aa14.08□□□□□ -0.16
TRAPPC6B-205ENST00000555269 FAM177A1Q8N128 213 aaPredicted RBP14.08□□□□□ -0.16
TRAPPC6B-205ENST00000555269 CAGE1Q8TC20 777 aa14.08□□□□□ -0.16
TRAPPC6B-205ENST00000555269 AFAP1L1Q8TED9 768 aa14.08□□□□□ -0.16
TRAPPC6B-205ENST00000555269 LMBR1Q8WVP7 490 aa14.08□□□□□ -0.16
TRAPPC6B-205ENST00000555269 ZSCAN31Q96LW9 406 aaPredicted RBP14.08□□□□□ -0.16
TRAPPC6B-205ENST00000555269 OSBPL7Q9BZF2 842 aa14.08□□□□□ -0.16
TRAPPC6B-205ENST00000555269 AZI2Q9H6S1 392 aa14.08□□□□□ -0.16
TRAPPC6B-205ENST00000555269 TBC1D22BQ9NU19 505 aa14.08□□□□□ -0.16
TRAPPC6B-205ENST00000555269 ERAP1Q9NZ08 941 aa14.08□□□□□ -0.16
TRAPPC6B-205ENST00000555269 CYP3A7-CYP3A51PA0A087WV96 503 aa14.07□□□□□ -0.16
TRAPPC6B-205ENST00000555269 IGKV6D-21A0A0A0MT36 114 aa14.07□□□□□ -0.16
TRAPPC6B-205ENST00000555269 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.07□□□□□ -0.16
TRAPPC6B-205ENST00000555269 CCDC194A0A1B0GVG4 234 aa14.07□□□□□ -0.16
TRAPPC6B-205ENST00000555269 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.07□□□□□ -0.16
TRAPPC6B-205ENST00000555269 BTBD18B2RXH4 712 aa14.07□□□□□ -0.16
TRAPPC6B-205ENST00000555269 BACH1O14867 736 aa14.07□□□□□ -0.16
TRAPPC6B-205ENST00000555269 NBNO60934 754 aa14.07□□□□□ -0.16
TRAPPC6B-205ENST00000555269 CD2BP2O95400 341 aaKnown RBP14.07□□□□□ -0.16
TRAPPC6B-205ENST00000555269 GNAT1P11488 350 aa14.07□□□□□ -0.16
TRAPPC6B-205ENST00000555269 ATP4AP20648 1035 aa14.07□□□□□ -0.16
TRAPPC6B-205ENST00000555269 CYP3A7P24462 503 aa14.07□□□□□ -0.16
TRAPPC6B-205ENST00000555269 SETQ01105 290 aaPredicted RBP14.07□□□□□ -0.16
TRAPPC6B-205ENST00000555269 GUCY1B3Q02153 619 aa14.07□□□□□ -0.16
TRAPPC6B-205ENST00000555269 PPFIA1Q13136 1202 aa14.07□□□□□ -0.16
TRAPPC6B-205ENST00000555269 MBTPS1Q14703 1052 aa14.07□□□□□ -0.16
TRAPPC6B-205ENST00000555269 RABEP1Q15276 862 aa14.07□□□□□ -0.16
TRAPPC6B-205ENST00000555269 GRIK4Q16099 956 aa14.07□□□□□ -0.16
TRAPPC6B-205ENST00000555269 LETM2Q2VYF4 491 aa14.07□□□□□ -0.16
TRAPPC6B-205ENST00000555269 Q4G0T1 1027 aa14.07□□□□□ -0.16
TRAPPC6B-205ENST00000555269 KRT40Q6A162 431 aa14.07□□□□□ -0.16
TRAPPC6B-205ENST00000555269 PSRC1Q6PGN9 363 aaPredicted RBP14.07□□□□□ -0.16
TRAPPC6B-205ENST00000555269 LRRC8DQ7L1W4 858 aa14.07□□□□□ -0.16
TRAPPC6B-205ENST00000555269 PLPPR4Q7Z2D5 763 aa14.07□□□□□ -0.16
TRAPPC6B-205ENST00000555269 TRMT1LQ7Z2T5 733 aaKnown RBP14.07□□□□□ -0.16
TRAPPC6B-205ENST00000555269 DEFB123Q8N688 67 aa14.07□□□□□ -0.16
TRAPPC6B-205ENST00000555269 CCDC155Q8N6L0 562 aa14.07□□□□□ -0.16
TRAPPC6B-205ENST00000555269 TRAPPC12Q8WVT3 735 aa14.07□□□□□ -0.16
TRAPPC6B-205ENST00000555269 NRCAMQ92823 1304 aa14.07□□□□□ -0.16
TRAPPC6B-205ENST00000555269 ZBBXA8MT70 800 aa14.06□□□□□ -0.16
TRAPPC6B-205ENST00000555269 RSPH10B2B2RC85 870 aa14.06□□□□□ -0.16
TRAPPC6B-205ENST00000555269 RSPH10BP0C881 870 aa14.06□□□□□ -0.16
TRAPPC6B-205ENST00000555269 PBX2P40425 430 aa14.06□□□□□ -0.16
TRAPPC6B-205ENST00000555269 SMAD3P84022 425 aaKnown RBP14.06□□□□□ -0.16
TRAPPC6B-205ENST00000555269 RBL2Q08999 1139 aa14.06□□□□□ -0.16
TRAPPC6B-205ENST00000555269 MIS18BP1Q6P0N0 1132 aa14.06□□□□□ -0.16
TRAPPC6B-205ENST00000555269 CCDC60Q8IWA6 550 aaPredicted RBP14.06□□□□□ -0.16
TRAPPC6B-205ENST00000555269 SLC5A5Q92911 643 aa14.06□□□□□ -0.16
TRAPPC6B-205ENST00000555269 TNFRSF25Q93038 417 aa14.06□□□□□ -0.16
TRAPPC6B-205ENST00000555269 FAM161BQ96MY7 647 aa14.06□□□□□ -0.16
TRAPPC6B-205ENST00000555269 MBOAT7Q96N66 472 aa14.06□□□□□ -0.16
TRAPPC6B-205ENST00000555269 TBC1D32Q96NH3 1257 aa14.06□□□□□ -0.16
TRAPPC6B-205ENST00000555269 UPF2Q9HAU5 1272 aaKnown RBP14.06□□□□□ -0.16
TRAPPC6B-205ENST00000555269 TRPC6Q9Y210 931 aa14.06□□□□□ -0.16
TRAPPC6B-205ENST00000555269 EMSYQ7Z589 1322 aa14.06□□□□□ -0.16
TRAPPC6B-205ENST00000555269 TRIP12Q14669 1992 aaPredicted RBP14.05□□□□□ -0.16
TRAPPC6B-205ENST00000555269 POTEB3A0JP26 581 aa14.05□□□□□ -0.16
TRAPPC6B-205ENST00000555269 SLC37A4O43826 429 aa14.05□□□□□ -0.16
TRAPPC6B-205ENST00000555269 CTSHP09668 335 aa14.05□□□□□ -0.16
TRAPPC6B-205ENST00000555269 RFC2P35250 354 aa14.05□□□□□ -0.16
TRAPPC6B-205ENST00000555269 KRT2P35908 639 aa14.05□□□□□ -0.16
TRAPPC6B-205ENST00000555269 RABGGTBP53611 331 aa14.05□□□□□ -0.16
TRAPPC6B-205ENST00000555269 LRCH2Q5VUJ6 765 aa14.05□□□□□ -0.16
TRAPPC6B-205ENST00000555269 ZNF746Q6NUN9 644 aaPredicted RBP14.05□□□□□ -0.16
TRAPPC6B-205ENST00000555269 GPR153Q6NV75 609 aa14.05□□□□□ -0.16
TRAPPC6B-205ENST00000555269 PDXDC2PQ6P474 469 aa14.05□□□□□ -0.16
TRAPPC6B-205ENST00000555269 POTEBQ6S5H4 581 aa14.05□□□□□ -0.16
TRAPPC6B-205ENST00000555269 NEK8Q86SG6 692 aa14.05□□□□□ -0.16
TRAPPC6B-205ENST00000555269 RIT2Q99578 217 aa14.05□□□□□ -0.16
TRAPPC6B-205ENST00000555269 LLPHQ9BRT6 129 aaKnown RBP14.05□□□□□ -0.16
TRAPPC6B-205ENST00000555269 BACH2Q9BYV9 841 aa14.05□□□□□ -0.16
TRAPPC6B-205ENST00000555269 UNC45AQ9H3U1 944 aa14.05□□□□□ -0.16
TRAPPC6B-205ENST00000555269 ZNF302Q9NR11 478 aa14.05□□□□□ -0.16
TRAPPC6B-205ENST00000555269 DDX25Q9UHL0 483 aaKnown RBP14.05□□□□□ -0.16
TRAPPC6B-205ENST00000555269 SAMM50Q9Y512 469 aa14.05□□□□□ -0.16
TRAPPC6B-205ENST00000555269 PCDHA10Q9Y5I2 948 aa14.05□□□□□ -0.16
TRAPPC6B-205ENST00000555269 SLC4A7Q9Y6M7 1214 aa14.05□□□□□ -0.16
TRAPPC6B-205ENST00000555269 CHMP2AO43633 222 aa14.04□□□□□ -0.16
TRAPPC6B-205ENST00000555269 CCNT1O60563 726 aaKnown RBP14.04□□□□□ -0.16
TRAPPC6B-205ENST00000555269 GAS7O60861 476 aa14.04□□□□□ -0.16
TRAPPC6B-205ENST00000555269 PSMD10O75832 226 aa14.04□□□□□ -0.16
TRAPPC6B-205ENST00000555269 CHRNA1P02708 482 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms