RNA–Protein interactions for RNA: ENST00000555240.1

CASC1-208, Transcript of cancer susceptibility 1, human

TSL 5

Gene CASC1, Length 467 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC1-208	ENST00000555240	MAN2B1	O00754	1011 aa		4.38	□□□□□ -1.71
CASC1-208	ENST00000555240	KCNK3	O14649	394 aa		4.38	□□□□□ -1.71
CASC1-208	ENST00000555240	PLD2	O14939	933 aa		4.38	□□□□□ -1.71
CASC1-208	ENST00000555240	RAPGEF3	O95398	923 aa		4.38	□□□□□ -1.71
CASC1-208	ENST00000555240	ZNF28	P17035	718 aa		4.38	□□□□□ -1.71
CASC1-208	ENST00000555240	SYN1	P17600	705 aa		4.38	□□□□□ -1.71
CASC1-208	ENST00000555240	CNR2	P34972	360 aa		4.38	□□□□□ -1.71
CASC1-208	ENST00000555240	MLLT6	P55198	1093 aa	Predicted RBP	4.38	□□□□□ -1.71
CASC1-208	ENST00000555240	JAM2	P57087	298 aa		4.38	□□□□□ -1.71
CASC1-208	ENST00000555240	PFKP	Q01813	784 aa		4.38	□□□□□ -1.71
CASC1-208	ENST00000555240	PHF19	Q5T6S3	580 aa		4.38	□□□□□ -1.71
CASC1-208	ENST00000555240	FERMT3	Q86UX7	667 aa		4.38	□□□□□ -1.71
CASC1-208	ENST00000555240	PROSER1	Q86XN7	944 aa		4.38	□□□□□ -1.71
CASC1-208	ENST00000555240	DTX3	Q8N9I9	347 aa		4.38	□□□□□ -1.71
CASC1-208	ENST00000555240	KRTAP9-8	Q9BYQ0	159 aa		4.38	□□□□□ -1.71
CASC1-208	ENST00000555240	PDGFD	Q9GZP0	370 aa	Predicted RBP	4.38	□□□□□ -1.71
CASC1-208	ENST00000555240	WASF3	Q9UPY6	502 aa		4.38	□□□□□ -1.71
CASC1-208	ENST00000555240	ADAMTS20	P59510	1910 aa		4.37	□□□□□ -1.71
CASC1-208	ENST00000555240	TCRBV16S1A1N1	A0A5B0	115 aa		4.37	□□□□□ -1.71
CASC1-208	ENST00000555240	ANKRD62	A6NC57	917 aa		4.37	□□□□□ -1.71
CASC1-208	ENST00000555240	FAM90A27P	A6NNH2	459 aa		4.37	□□□□□ -1.71
CASC1-208	ENST00000555240	ZNF839	A8K0R7	811 aa		4.37	□□□□□ -1.71
CASC1-208	ENST00000555240	ACOT7	O00154	380 aa		4.37	□□□□□ -1.71
CASC1-208	ENST00000555240	FOXD2	O60548	495 aa	Predicted RBP	4.37	□□□□□ -1.71
CASC1-208	ENST00000555240	AMY2A	P04746	511 aa		4.37	□□□□□ -1.71
CASC1-208	ENST00000555240	AMY2B	P19961	511 aa		4.37	□□□□□ -1.71
CASC1-208	ENST00000555240	SMAD2	Q15796	467 aa	Known RBP	4.37	□□□□□ -1.71
CASC1-208	ENST00000555240	FGD2	Q7Z6J4	655 aa		4.37	□□□□□ -1.71
CASC1-208	ENST00000555240	LGI4	Q8N135	537 aa		4.37	□□□□□ -1.71
CASC1-208	ENST00000555240	CXorf38	Q8TB03	319 aa		4.37	□□□□□ -1.71
CASC1-208	ENST00000555240	IGDCC4	Q8TDY8	1250 aa		4.37	□□□□□ -1.71
CASC1-208	ENST00000555240	SCLY	Q96I15	445 aa		4.37	□□□□□ -1.71
CASC1-208	ENST00000555240	CELF4	Q9BZC1	486 aa	Known RBP	4.37	□□□□□ -1.71
CASC1-208	ENST00000555240	BARX1	Q9HBU1	254 aa	Predicted RBP	4.37	□□□□□ -1.71
CASC1-208	ENST00000555240	SLC39A2	Q9NP94	309 aa		4.37	□□□□□ -1.71
CASC1-208	ENST00000555240	ZFP69B	Q9UJL9	534 aa		4.37	□□□□□ -1.71
CASC1-208	ENST00000555240	MRPL42	Q9Y6G3	142 aa	Known RBP	4.37	□□□□□ -1.71
CASC1-208	ENST00000555240	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	4.36	□□□□□ -1.71
CASC1-208	ENST00000555240	C9orf118	A6NHY6	69 aa		4.36	□□□□□ -1.71
CASC1-208	ENST00000555240		B4E1Z4	1266 aa		4.36	□□□□□ -1.71
CASC1-208	ENST00000555240	ZNF561-AS1	K7EIQ3	104 aa		4.36	□□□□□ -1.71
CASC1-208	ENST00000555240	SCD	O00767	359 aa		4.36	□□□□□ -1.71
CASC1-208	ENST00000555240	PRICKLE3	O43900	615 aa	Predicted RBP	4.36	□□□□□ -1.71
CASC1-208	ENST00000555240	OPA1	O60313	960 aa		4.36	□□□□□ -1.71
CASC1-208	ENST00000555240	CLASP2	O75122	1294 aa	Known RBP	4.36	□□□□□ -1.71
CASC1-208	ENST00000555240	HIP1R	O75146	1068 aa		4.36	□□□□□ -1.71
CASC1-208	ENST00000555240	NPTXR	O95502	500 aa		4.36	□□□□□ -1.71
CASC1-208	ENST00000555240	ASMTL	O95671	621 aa		4.36	□□□□□ -1.71
CASC1-208	ENST00000555240	CELA3B	P08861	270 aa		4.36	□□□□□ -1.71
CASC1-208	ENST00000555240	LACTB	P83111	547 aa	Predicted RBP	4.36	□□□□□ -1.71
CASC1-208	ENST00000555240	PLP2	Q04941	152 aa		4.36	□□□□□ -1.71
CASC1-208	ENST00000555240	DBP	Q10586	325 aa	Predicted RBP	4.36	□□□□□ -1.71
CASC1-208	ENST00000555240	SQSTM1	Q13501	440 aa		4.36	□□□□□ -1.71
CASC1-208	ENST00000555240	RTP5	Q14D33	572 aa		4.36	□□□□□ -1.71
CASC1-208	ENST00000555240	FNDC3B	Q53EP0	1204 aa	Known RBP	4.36	□□□□□ -1.71
CASC1-208	ENST00000555240	ZFYVE27	Q5T4F4	411 aa		4.36	□□□□□ -1.71
CASC1-208	ENST00000555240	DPP8	Q6V1X1	898 aa	Predicted RBP	4.36	□□□□□ -1.71
CASC1-208	ENST00000555240	PLEKHH3	Q7Z736	793 aa		4.36	□□□□□ -1.71
CASC1-208	ENST00000555240	DDX53	Q86TM3	631 aa	Known RBP	4.36	□□□□□ -1.71
CASC1-208	ENST00000555240	DHX37	Q8IY37	1157 aa	Known RBP	4.36	□□□□□ -1.71
CASC1-208	ENST00000555240	STPG3	Q8N7X2	389 aa		4.36	□□□□□ -1.71
CASC1-208	ENST00000555240	C2orf69	Q8N8R5	385 aa		4.36	□□□□□ -1.71
CASC1-208	ENST00000555240	IGSF22	Q8N9C0	903 aa		4.36	□□□□□ -1.71
CASC1-208	ENST00000555240	WDR48	Q8TAF3	677 aa		4.36	□□□□□ -1.71
CASC1-208	ENST00000555240	ZCCHC14	Q8WYQ9	949 aa	Known RBP	4.36	□□□□□ -1.71
CASC1-208	ENST00000555240	YTHDC1	Q96MU7	727 aa	Known RBP	4.36	□□□□□ -1.71
CASC1-208	ENST00000555240	TACO1	Q9BSH4	297 aa	Known RBP	4.36	□□□□□ -1.71
CASC1-208	ENST00000555240	BDH2	Q9BUT1	245 aa		4.36	□□□□□ -1.71
CASC1-208	ENST00000555240	SMURF1	Q9HCE7	757 aa		4.36	□□□□□ -1.71
CASC1-208	ENST00000555240	TRIM39	Q9HCM9	518 aa		4.36	□□□□□ -1.71
CASC1-208	ENST00000555240	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	4.36	□□□□□ -1.71
CASC1-208	ENST00000555240	ZDHHC9	Q9Y397	364 aa		4.36	□□□□□ -1.71
CASC1-208	ENST00000555240	SLC12A8	A0AV02	714 aa		4.35	□□□□□ -1.71
CASC1-208	ENST00000555240	ESYT3	A0FGR9	886 aa		4.35	□□□□□ -1.71
CASC1-208	ENST00000555240	PPP1R12A	O14974	1030 aa	Predicted RBP	4.35	□□□□□ -1.71
CASC1-208	ENST00000555240	KCNQ2	O43526	872 aa		4.35	□□□□□ -1.71
CASC1-208	ENST00000555240	CHGB	P05060	677 aa		4.35	□□□□□ -1.71
CASC1-208	ENST00000555240	IGFALS	P35858	605 aa		4.35	□□□□□ -1.71
CASC1-208	ENST00000555240	FLT3	P36888	993 aa		4.35	□□□□□ -1.71
CASC1-208	ENST00000555240	TMEM177	Q53S58	311 aa		4.35	□□□□□ -1.71
CASC1-208	ENST00000555240	CPZ	Q66K79	652 aa		4.35	□□□□□ -1.71
CASC1-208	ENST00000555240	PKN3	Q6P5Z2	889 aa		4.35	□□□□□ -1.71
CASC1-208	ENST00000555240	HHIPL2	Q6UWX4	724 aa		4.35	□□□□□ -1.71
CASC1-208	ENST00000555240	HOMER1	Q86YM7	354 aa		4.35	□□□□□ -1.71
CASC1-208	ENST00000555240	GPATCH3	Q96I76	525 aa		4.35	□□□□□ -1.71
CASC1-208	ENST00000555240	RNPC3	Q96LT9	517 aa	Known RBP	4.35	□□□□□ -1.71
CASC1-208	ENST00000555240	CLUHP3	Q96NS8	147 aa		4.35	□□□□□ -1.71
CASC1-208	ENST00000555240	KANSL2	Q9H9L4	492 aa		4.35	□□□□□ -1.71
CASC1-208	ENST00000555240	TMEM260	Q9NX78	707 aa		4.35	□□□□□ -1.71
CASC1-208	ENST00000555240	INVS	Q9Y283	1065 aa		4.35	□□□□□ -1.71
CASC1-208	ENST00000555240	DUSP10	Q9Y6W6	482 aa		4.35	□□□□□ -1.71
CASC1-208	ENST00000555240	ZNF536	O15090	1300 aa		4.35	□□□□□ -1.71
CASC1-208	ENST00000555240		H0Y858	1186 aa		4.34	□□□□□ -1.71
CASC1-208	ENST00000555240		M0R2C6	588 aa		4.34	□□□□□ -1.71
CASC1-208	ENST00000555240	PPM1G	O15355	546 aa	Predicted RBP	4.34	□□□□□ -1.71
CASC1-208	ENST00000555240	KRT37	O76014	449 aa		4.34	□□□□□ -1.71
CASC1-208	ENST00000555240	C4BPA	P04003	597 aa	Known RBP	4.34	□□□□□ -1.71
CASC1-208	ENST00000555240	ASL	P04424	464 aa		4.34	□□□□□ -1.71
CASC1-208	ENST00000555240	PTGS1	P23219	599 aa		4.34	□□□□□ -1.71
CASC1-208	ENST00000555240	HERVK_113	P62684	666 aa		4.34	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms