RNA–Protein interactions for RNA: ENST00000555235.1

MARK3-209, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 2

Gene MARK3, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-209ENST00000555235 CCDC188H7C350 402 aa17.51■□□□□ 0.39
MARK3-209ENST00000555235 TMOD1P28289 359 aa17.51■□□□□ 0.39
MARK3-209ENST00000555235 NBPF5PQ86XG9 351 aaPredicted RBP17.51■□□□□ 0.39
MARK3-209ENST00000555235 MAPKAPK5Q8IW41 473 aa17.51■□□□□ 0.39
MARK3-209ENST00000555235 NEDD1Q8NHV4 660 aa17.51■□□□□ 0.39
MARK3-209ENST00000555235 UBLCP1Q8WVY7 318 aaPredicted RBP17.51■□□□□ 0.39
MARK3-209ENST00000555235 LARP4BQ92615 738 aaKnown RBP17.51■□□□□ 0.39
MARK3-209ENST00000555235 ZNF622Q969S3 477 aaKnown RBP eCLIP17.51■□□□□ 0.399e-6■□□□□ 9.4
MARK3-209ENST00000555235 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.51■□□□□ 0.39
MARK3-209ENST00000555235 LRRC27Q9C0I9 530 aa17.51■□□□□ 0.39
MARK3-209ENST00000555235 BCCIPQ9P287 314 aaKnown RBP eCLIP17.51■□□□□ 0.39
MARK3-209ENST00000555235 NAV1Q8NEY1 1877 aa17.51■□□□□ 0.39
MARK3-209ENST00000555235 MGRN1O60291 552 aa17.5■□□□□ 0.39
MARK3-209ENST00000555235 NOL4O94818 638 aa17.5■□□□□ 0.39
MARK3-209ENST00000555235 KIF4AO95239 1232 aa17.5■□□□□ 0.39
MARK3-209ENST00000555235 CDK8P49336 464 aa17.5■□□□□ 0.39
MARK3-209ENST00000555235 USP11P51784 963 aa17.5■□□□□ 0.39
MARK3-209ENST00000555235 FKBP3Q00688 224 aaKnown RBP17.5■□□□□ 0.39
MARK3-209ENST00000555235 SPRED3Q2MJR0 410 aa17.5■□□□□ 0.39
MARK3-209ENST00000555235 CPLX4Q7Z7G2 160 aa17.5■□□□□ 0.39
MARK3-209ENST00000555235 REXO1Q8N1G1 1221 aaKnown RBP17.5■□□□□ 0.39
MARK3-209ENST00000555235 CCT6BQ92526 530 aa17.5■□□□□ 0.39
MARK3-209ENST00000555235 PIGSQ96S52 555 aa17.5■□□□□ 0.39
MARK3-209ENST00000555235 SETDB2Q96T68 719 aa17.5■□□□□ 0.39
MARK3-209ENST00000555235 EYA3Q99504 573 aa17.5■□□□□ 0.39
MARK3-209ENST00000555235 ZNF287Q9HBT7 754 aa17.5■□□□□ 0.39
MARK3-209ENST00000555235 TMEM260Q9NX78 707 aa17.5■□□□□ 0.39
MARK3-209ENST00000555235 SEC63Q9UGP8 760 aaKnown RBP17.5■□□□□ 0.39
MARK3-209ENST00000555235 FBXL5Q9UKA1 691 aa17.5■□□□□ 0.39
MARK3-209ENST00000555235 ZNF831Q5JPB2 1677 aa17.5■□□□□ 0.39
MARK3-209ENST00000555235 ATAD5Q96QE3 1844 aa17.5■□□□□ 0.39
MARK3-209ENST00000555235 A0A087X0T9 212 aa17.5■□□□□ 0.39
MARK3-209ENST00000555235 PGRMC1O00264 195 aaKnown RBP17.5■□□□□ 0.39
MARK3-209ENST00000555235 SSBP05455 408 aaKnown RBP eCLIP17.5■□□□□ 0.39
MARK3-209ENST00000555235 FAM228BP0C875 321 aa17.5■□□□□ 0.39
MARK3-209ENST00000555235 SCP2P22307 547 aa17.5■□□□□ 0.39
MARK3-209ENST00000555235 POLR2FP61218 127 aaKnown RBP17.5■□□□□ 0.39
MARK3-209ENST00000555235 KLHL30Q0D2K2 578 aa17.5■□□□□ 0.39
MARK3-209ENST00000555235 CALCRLQ16602 461 aa17.5■□□□□ 0.39
MARK3-209ENST00000555235 C16orf86Q6ZW13 317 aa17.5■□□□□ 0.39
MARK3-209ENST00000555235 TEX11Q8IYF3 940 aa17.5■□□□□ 0.39
MARK3-209ENST00000555235 CCDC24Q8N4L8 307 aa17.5■□□□□ 0.39
MARK3-209ENST00000555235 HVCN1Q96D96 273 aa17.5■□□□□ 0.39
MARK3-209ENST00000555235 LSM14BQ9BX40 385 aaKnown RBP17.5■□□□□ 0.39
MARK3-209ENST00000555235 AIPL1Q9NZN9 384 aa17.5■□□□□ 0.39
MARK3-209ENST00000555235 NARFQ9UHQ1 456 aa17.5■□□□□ 0.39
MARK3-209ENST00000555235 NOVA2Q9UNW9 492 aaKnown RBP17.5■□□□□ 0.39
MARK3-209ENST00000555235 MYH7BA7E2Y1 1941 aa17.49■□□□□ 0.39
MARK3-209ENST00000555235 CNTNAP4Q9C0A0 1308 aa17.49■□□□□ 0.39
MARK3-209ENST00000555235 SART1O43290 800 aaKnown RBP17.49■□□□□ 0.39
MARK3-209ENST00000555235 EDIL3O43854 480 aa17.49■□□□□ 0.39
MARK3-209ENST00000555235 ERCC3P19447 782 aa17.49■□□□□ 0.39
MARK3-209ENST00000555235 BYSLQ13895 437 aaKnown RBP17.49■□□□□ 0.39
MARK3-209ENST00000555235 MSL1Q68DK7 614 aa17.49■□□□□ 0.39
MARK3-209ENST00000555235 DYMQ7RTS9 669 aa17.49■□□□□ 0.39
MARK3-209ENST00000555235 RAD54LQ92698 747 aa17.49■□□□□ 0.39
MARK3-209ENST00000555235 CDK5RAP3Q96JB5 506 aa17.49■□□□□ 0.39
MARK3-209ENST00000555235 VAT1LQ9HCJ6 419 aa17.49■□□□□ 0.39
MARK3-209ENST00000555235 USP21Q9UK80 565 aa17.49■□□□□ 0.39
MARK3-209ENST00000555235 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.49■□□□□ 0.39
MARK3-209ENST00000555235 LDHCP07864 332 aa17.49■□□□□ 0.39
MARK3-209ENST00000555235 EIF3BP55884 814 aaKnown RBP17.49■□□□□ 0.39
MARK3-209ENST00000555235 KCNQ4P56696 695 aa17.49■□□□□ 0.39
MARK3-209ENST00000555235 RAPGEF1Q13905 1077 aa17.49■□□□□ 0.39
MARK3-209ENST00000555235 CENPTQ96BT3 561 aa17.49■□□□□ 0.39
MARK3-209ENST00000555235 PSMD1Q99460 953 aa17.49■□□□□ 0.39
MARK3-209ENST00000555235 RTFDC1Q9BY42 306 aaPredicted RBP17.49■□□□□ 0.39
MARK3-209ENST00000555235 SLITRK6Q9H5Y7 841 aa17.49■□□□□ 0.39
MARK3-209ENST00000555235 CNOT8Q9UFF9 292 aaKnown RBP17.49■□□□□ 0.39
MARK3-209ENST00000555235 SRP68Q9UHB9 627 aaKnown RBP17.49■□□□□ 0.39
MARK3-209ENST00000555235 ADAMTS1Q9UHI8 967 aa17.49■□□□□ 0.39
MARK3-209ENST00000555235 CEP104O60308 925 aa17.48■□□□□ 0.39
MARK3-209ENST00000555235 GNA14O95837 355 aa17.48■□□□□ 0.39
MARK3-209ENST00000555235 MAGOHP61326 146 aaKnown RBP17.48■□□□□ 0.39
MARK3-209ENST00000555235 PDIA5Q14554 519 aa17.48■□□□□ 0.39
MARK3-209ENST00000555235 ASIC2Q16515 512 aa17.48■□□□□ 0.39
MARK3-209ENST00000555235 SPDYCQ5MJ68 293 aa17.48■□□□□ 0.39
MARK3-209ENST00000555235 ANKS4BQ8N8V4 417 aa17.48■□□□□ 0.39
MARK3-209ENST00000555235 MAGOHBQ96A72 148 aaKnown RBP17.48■□□□□ 0.39
MARK3-209ENST00000555235 CHMP6Q96FZ7 201 aa17.48■□□□□ 0.39
MARK3-209ENST00000555235 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.48■□□□□ 0.39
MARK3-209ENST00000555235 RIOX1Q9H6W3 641 aa17.48■□□□□ 0.39
MARK3-209ENST00000555235 COL24A1Q17RW2 1714 aa17.48■□□□□ 0.39
MARK3-209ENST00000555235 NRAPQ86VF7 1730 aa17.48■□□□□ 0.39
MARK3-209ENST00000555235 SLC37A4O43826 429 aa17.47■□□□□ 0.39
MARK3-209ENST00000555235 DRD4P21917 467 aa17.47■□□□□ 0.39
MARK3-209ENST00000555235 NOVP48745 357 aa17.47■□□□□ 0.39
MARK3-209ENST00000555235 TMEM266Q2M3C6 531 aa17.47■□□□□ 0.39
MARK3-209ENST00000555235 KRT71Q3SY84 523 aa17.47■□□□□ 0.39
MARK3-209ENST00000555235 TMEM119Q4V9L6 283 aa17.47■□□□□ 0.39
MARK3-209ENST00000555235 TMC3Q7Z5M5 1100 aa17.47■□□□□ 0.39
MARK3-209ENST00000555235 MYOCDQ8IZQ8 938 aa17.47■□□□□ 0.39
MARK3-209ENST00000555235 CCDC26Q8TAB7 109 aa17.47■□□□□ 0.39
MARK3-209ENST00000555235 CEP63Q96MT8 703 aa17.47■□□□□ 0.39
MARK3-209ENST00000555235 PACSIN1Q9BY11 444 aa17.47■□□□□ 0.39
MARK3-209ENST00000555235 AFF2P51816 1311 aa17.47■□□□□ 0.39
MARK3-209ENST00000555235 GSTA1P08263 222 aa17.47■□□□□ 0.39
MARK3-209ENST00000555235 CLNS1AP54105 237 aaKnown RBP17.47■□□□□ 0.39
MARK3-209ENST00000555235 ZCWPW2Q504Y3 356 aa17.47■□□□□ 0.39
MARK3-209ENST00000555235 TPTE2Q6XPS3 522 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms