RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	JAM3	Q9BX67	310 aa		7.44	□□□□□ -1.22
PSMC6-208	ENST00000554956	AP5M1	Q9H0R1	490 aa		7.44	□□□□□ -1.22
PSMC6-208	ENST00000554956	ZSWIM4	Q9H7M6	989 aa		7.44	□□□□□ -1.22
PSMC6-208	ENST00000554956	PALD1	Q9ULE6	856 aa		7.44	□□□□□ -1.22
PSMC6-208	ENST00000554956	COA3	Q9Y2R0	106 aa	Predicted RBP	7.44	□□□□□ -1.22
PSMC6-208	ENST00000554956	GCC2	Q8IWJ2	1684 aa		7.44	□□□□□ -1.22
PSMC6-208	ENST00000554956	PIK3R4	Q99570	1358 aa		7.44	□□□□□ -1.22
PSMC6-208	ENST00000554956	COL16A1	Q07092	1604 aa	Predicted RBP	7.43	□□□□□ -1.22
PSMC6-208	ENST00000554956	IQGAP3	Q86VI3	1631 aa		7.43	□□□□□ -1.22
PSMC6-208	ENST00000554956	C6orf222	P0C671	652 aa	Predicted RBP	7.43	□□□□□ -1.22
PSMC6-208	ENST00000554956	SUMO1	P63165	101 aa	Known RBP	7.43	□□□□□ -1.22
PSMC6-208	ENST00000554956	CIAPIN1	Q6FI81	312 aa		7.43	□□□□□ -1.22
PSMC6-208	ENST00000554956	RSPO2	Q6UXX9	243 aa	Predicted RBP	7.43	□□□□□ -1.22
PSMC6-208	ENST00000554956	LBX2	Q6XYB7	198 aa		7.43	□□□□□ -1.22
PSMC6-208	ENST00000554956	SCUBE1	Q8IWY4	988 aa		7.43	□□□□□ -1.22
PSMC6-208	ENST00000554956	MRPS23	Q9Y3D9	190 aa	Known RBP	7.43	□□□□□ -1.22
PSMC6-208	ENST00000554956	MYO5B	Q9ULV0	1848 aa		7.43	□□□□□ -1.22
PSMC6-208	ENST00000554956	PFKL	P17858	780 aa		7.42	□□□□□ -1.22
PSMC6-208	ENST00000554956	SLC6A11	P48066	632 aa		7.42	□□□□□ -1.22
PSMC6-208	ENST00000554956	GPR85	P60893	370 aa		7.42	□□□□□ -1.22
PSMC6-208	ENST00000554956	SLC9A5	Q14940	896 aa		7.42	□□□□□ -1.22
PSMC6-208	ENST00000554956	TARBP2	Q15633	366 aa	Known RBP	7.42	□□□□□ -1.22
PSMC6-208	ENST00000554956	CCDC144B	Q3MJ40	725 aa		7.42	□□□□□ -1.22
PSMC6-208	ENST00000554956	FAM129C	Q86XR2	697 aa		7.42	□□□□□ -1.22
PSMC6-208	ENST00000554956	SEC14L1	Q92503	715 aa		7.42	□□□□□ -1.22
PSMC6-208	ENST00000554956	CHD2	O14647	1828 aa	Known RBP	7.42	□□□□□ -1.22
PSMC6-208	ENST00000554956	SPATA31A6	Q5VVP1	1343 aa		7.42	□□□□□ -1.22
PSMC6-208	ENST00000554956	MST1R	Q04912	1400 aa		7.42	□□□□□ -1.22
PSMC6-208	ENST00000554956	NAIP	Q13075	1403 aa		7.42	□□□□□ -1.22
PSMC6-208	ENST00000554956	NRXN3	Q9Y4C0	1643 aa		7.41	□□□□□ -1.22
PSMC6-208	ENST00000554956	ZBTB7A	O95365	584 aa		7.41	□□□□□ -1.22
PSMC6-208	ENST00000554956	NCAM1	P13591	858 aa		7.41	□□□□□ -1.22
PSMC6-208	ENST00000554956	GRK2	P25098	689 aa		7.41	□□□□□ -1.22
PSMC6-208	ENST00000554956	GRK3	P35626	688 aa		7.41	□□□□□ -1.22
PSMC6-208	ENST00000554956	RBM10	P98175	930 aa	Known RBP	7.41	□□□□□ -1.22
PSMC6-208	ENST00000554956	CNKSR3	Q6P9H4	555 aa		7.41	□□□□□ -1.22
PSMC6-208	ENST00000554956	LCNL1	Q6ZST4	164 aa		7.41	□□□□□ -1.22
PSMC6-208	ENST00000554956	MILR1	Q7Z6M3	343 aa		7.41	□□□□□ -1.22
PSMC6-208	ENST00000554956	IFNL3	Q8IZI9	196 aa		7.41	□□□□□ -1.22
PSMC6-208	ENST00000554956	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	7.41	□□□□□ -1.22
PSMC6-208	ENST00000554956	KISS1R	Q969F8	398 aa	Predicted RBP	7.41	□□□□□ -1.22
PSMC6-208	ENST00000554956	IPO9	Q96P70	1041 aa	Known RBP	7.41	□□□□□ -1.22
PSMC6-208	ENST00000554956	KCNJ15	Q99712	375 aa		7.41	□□□□□ -1.22
PSMC6-208	ENST00000554956	SYT3	Q9BQG1	590 aa		7.41	□□□□□ -1.22
PSMC6-208	ENST00000554956	DHRS4	Q9BTZ2	278 aa		7.41	□□□□□ -1.22
PSMC6-208	ENST00000554956	RNF38	Q9H0F5	515 aa		7.41	□□□□□ -1.22
PSMC6-208	ENST00000554956	EPB41L1	Q9H4G0	881 aa		7.41	□□□□□ -1.22
PSMC6-208	ENST00000554956	PIF1	Q9H611	641 aa		7.41	□□□□□ -1.22
PSMC6-208	ENST00000554956	PTCH2	Q9Y6C5	1203 aa		7.41	□□□□□ -1.22
PSMC6-208	ENST00000554956	RFXAP	O00287	272 aa		7.4	□□□□□ -1.22
PSMC6-208	ENST00000554956	PLA2G1B	P04054	148 aa	Known RBP	7.4	□□□□□ -1.22
PSMC6-208	ENST00000554956	NFE2L2	Q16236	605 aa		7.4	□□□□□ -1.22
PSMC6-208	ENST00000554956	KIZ	Q2M2Z5	673 aa		7.4	□□□□□ -1.22
PSMC6-208	ENST00000554956	ZNF385B	Q569K4	471 aa		7.4	□□□□□ -1.22
PSMC6-208	ENST00000554956	MEX3C	Q5U5Q3	659 aa	Known RBP	7.4	□□□□□ -1.22
PSMC6-208	ENST00000554956	STEAP3	Q658P3	488 aa		7.4	□□□□□ -1.22
PSMC6-208	ENST00000554956	AMIGO3	Q86WK7	504 aa		7.4	□□□□□ -1.22
PSMC6-208	ENST00000554956	FAM26E	Q8N5C1	309 aa		7.4	□□□□□ -1.22
PSMC6-208	ENST00000554956	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	7.4	□□□□□ -1.22
PSMC6-208	ENST00000554956	ZFYVE21	Q9BQ24	234 aa		7.4	□□□□□ -1.22
PSMC6-208	ENST00000554956	KANSL2	Q9H9L4	492 aa		7.4	□□□□□ -1.22
PSMC6-208	ENST00000554956	FAN1	Q9Y2M0	1017 aa		7.4	□□□□□ -1.22
PSMC6-208	ENST00000554956	SETBP1	Q9Y6X0	1596 aa		7.4	□□□□□ -1.22
PSMC6-208	ENST00000554956	AHDC1	Q5TGY3	1603 aa	Predicted RBP	7.4	□□□□□ -1.22
PSMC6-208	ENST00000554956	PHLPP1	O60346	1717 aa		7.4	□□□□□ -1.23
PSMC6-208	ENST00000554956	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	7.4	□□□□□ -1.23
PSMC6-208	ENST00000554956	DIP2A	Q14689	1571 aa		7.39	□□□□□ -1.23
PSMC6-208	ENST00000554956	TRPM2	O94759	1503 aa		7.39	□□□□□ -1.23
PSMC6-208	ENST00000554956	ASXL1	Q8IXJ9	1541 aa		7.39	□□□□□ -1.23
PSMC6-208	ENST00000554956	SETD5	Q9C0A6	1442 aa		7.39	□□□□□ -1.23
PSMC6-208	ENST00000554956	RRBP1	Q9P2E9	1410 aa	Known RBP	7.39	□□□□□ -1.23
PSMC6-208	ENST00000554956	DGKI	O75912	1065 aa		7.39	□□□□□ -1.23
PSMC6-208	ENST00000554956	C8B	P07358	591 aa		7.39	□□□□□ -1.23
PSMC6-208	ENST00000554956	ZSCAN22	P10073	491 aa	Predicted RBP	7.39	□□□□□ -1.23
PSMC6-208	ENST00000554956	FOXO4	P98177	505 aa		7.39	□□□□□ -1.23
PSMC6-208	ENST00000554956	FZD5	Q13467	585 aa		7.39	□□□□□ -1.23
PSMC6-208	ENST00000554956	LONRF2	Q1L5Z9	754 aa		7.39	□□□□□ -1.23
PSMC6-208	ENST00000554956	VMAC	Q2NL98	169 aa		7.39	□□□□□ -1.23
PSMC6-208	ENST00000554956	C2orf27A	Q580R0	203 aa		7.39	□□□□□ -1.23
PSMC6-208	ENST00000554956	B3GNT8	Q7Z7M8	397 aa		7.39	□□□□□ -1.23
PSMC6-208	ENST00000554956	JMY	Q8N9B5	988 aa		7.39	□□□□□ -1.23
PSMC6-208	ENST00000554956	SMARCC2	Q8TAQ2	1214 aa		7.39	□□□□□ -1.23
PSMC6-208	ENST00000554956	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	7.39	□□□□□ -1.23
PSMC6-208	ENST00000554956	PIP4K2C	Q8TBX8	421 aa		7.39	□□□□□ -1.23
PSMC6-208	ENST00000554956	THAP3	Q8WTV1	239 aa	Predicted RBP	7.39	□□□□□ -1.23
PSMC6-208	ENST00000554956	PTPRN2	Q92932	1015 aa		7.39	□□□□□ -1.23
PSMC6-208	ENST00000554956	DACT3	Q96B18	629 aa	Predicted RBP	7.39	□□□□□ -1.23
PSMC6-208	ENST00000554956	PWWP2A	Q96N64	755 aa		7.39	□□□□□ -1.23
PSMC6-208	ENST00000554956	ORAI2	Q96SN7	254 aa		7.39	□□□□□ -1.23
PSMC6-208	ENST00000554956	IPPK	Q9H8X2	491 aa		7.39	□□□□□ -1.23
PSMC6-208	ENST00000554956	NEXMIF	Q5QGS0	1516 aa		7.38	□□□□□ -1.23
PSMC6-208	ENST00000554956	DCC	P43146	1447 aa		7.38	□□□□□ -1.23
PSMC6-208	ENST00000554956	ADGRL3	Q9HAR2	1447 aa		7.38	□□□□□ -1.23
PSMC6-208	ENST00000554956	AFF2	P51816	1311 aa		7.38	□□□□□ -1.23
PSMC6-208	ENST00000554956	HGS	O14964	777 aa	Predicted RBP	7.38	□□□□□ -1.23
PSMC6-208	ENST00000554956	SOD2	P04179	222 aa		7.38	□□□□□ -1.23
PSMC6-208	ENST00000554956	COL6A2	P12110	1019 aa		7.38	□□□□□ -1.23
PSMC6-208	ENST00000554956	STAT5A	P42229	794 aa		7.38	□□□□□ -1.23
PSMC6-208	ENST00000554956	CACNB2	Q08289	660 aa	Predicted RBP	7.38	□□□□□ -1.23
PSMC6-208	ENST00000554956	EMC4	Q5J8M3	183 aa		7.38	□□□□□ -1.23

Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms