RNA–Protein interactions for RNA: ENST00000554805.6

SYNE2-213, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-213ENST00000554805 GRID2IPA4D2P6 1211 aa10.41□□□□□ -0.74
SYNE2-213ENST00000554805 CLIC2O15247 247 aa10.41□□□□□ -0.74
SYNE2-213ENST00000554805 APBA3O96018 575 aa10.41□□□□□ -0.74
SYNE2-213ENST00000554805 PTK2Q05397 1052 aa10.41□□□□□ -0.74
SYNE2-213ENST00000554805 ALKBH5Q6P6C2 394 aaKnown RBP10.41□□□□□ -0.74
SYNE2-213ENST00000554805 ZNF572Q7Z3I7 529 aaPredicted RBP10.41□□□□□ -0.74
SYNE2-213ENST00000554805 ERMNQ8TAM6 284 aa10.41□□□□□ -0.74
SYNE2-213ENST00000554805 TBC1D22AQ8WUA7 517 aa10.41□□□□□ -0.74
SYNE2-213ENST00000554805 SERPINB13Q9UIV8 391 aa10.41□□□□□ -0.74
SYNE2-213ENST00000554805 DNM3Q9UQ16 869 aa10.41□□□□□ -0.74
SYNE2-213ENST00000554805 CAPN7Q9Y6W3 813 aa10.41□□□□□ -0.74
SYNE2-213ENST00000554805 E7EVH7 732 aa10.41□□□□□ -0.74
SYNE2-213ENST00000554805 TBCAO75347 108 aaKnown RBP10.41□□□□□ -0.74
SYNE2-213ENST00000554805 HLA-DOAP06340 250 aa10.41□□□□□ -0.74
SYNE2-213ENST00000554805 XRCC5P13010 732 aaKnown RBP10.41□□□□□ -0.74
SYNE2-213ENST00000554805 GCFC2P16383 781 aaKnown RBP10.41□□□□□ -0.74
SYNE2-213ENST00000554805 CDC37Q16543 378 aaPredicted RBP10.41□□□□□ -0.74
SYNE2-213ENST00000554805 MEI1Q5TIA1 1274 aa10.41□□□□□ -0.74
SYNE2-213ENST00000554805 PPP4R3AQ6IN85 833 aa10.41□□□□□ -0.74
SYNE2-213ENST00000554805 SH3GL2Q99962 352 aa10.41□□□□□ -0.74
SYNE2-213ENST00000554805 PHLPP1O60346 1717 aa10.41□□□□□ -0.74
SYNE2-213ENST00000554805 SNED1Q8TER0 1413 aa10.41□□□□□ -0.74
SYNE2-213ENST00000554805 ABCA3Q99758 1704 aa10.41□□□□□ -0.74
SYNE2-213ENST00000554805 KRIT1O00522 736 aa10.41□□□□□ -0.74
SYNE2-213ENST00000554805 ZBTB5O15062 677 aa10.41□□□□□ -0.74
SYNE2-213ENST00000554805 AFPP02771 609 aaKnown RBP10.41□□□□□ -0.74
SYNE2-213ENST00000554805 CYP11B2P19099 503 aa10.41□□□□□ -0.74
SYNE2-213ENST00000554805 MNAT1P51948 309 aa10.41□□□□□ -0.74
SYNE2-213ENST00000554805 USH1GQ495M9 461 aa10.41□□□□□ -0.74
SYNE2-213ENST00000554805 RC3H1Q5TC82 1133 aaKnown RBP10.41□□□□□ -0.74
SYNE2-213ENST00000554805 NAA35Q5VZE5 725 aa10.41□□□□□ -0.74
SYNE2-213ENST00000554805 SFR1Q86XK3 245 aa10.41□□□□□ -0.74
SYNE2-213ENST00000554805 OR2W6PQ8NHA6 318 aa10.41□□□□□ -0.74
SYNE2-213ENST00000554805 WHAMMQ8TF30 809 aa10.41□□□□□ -0.74
SYNE2-213ENST00000554805 SYN2Q92777 582 aaPredicted RBP10.41□□□□□ -0.74
SYNE2-213ENST00000554805 RBM17Q96I25 401 aaKnown RBP10.41□□□□□ -0.74
SYNE2-213ENST00000554805 DDX47Q9H0S4 455 aaKnown RBP10.41□□□□□ -0.74
SYNE2-213ENST00000554805 GDF3Q9NR23 364 aa10.41□□□□□ -0.74
SYNE2-213ENST00000554805 ZNF233A6NK53 670 aa10.4□□□□□ -0.74
SYNE2-213ENST00000554805 FAM196BA6NMK8 535 aa10.4□□□□□ -0.74
SYNE2-213ENST00000554805 A6NNZ2 444 aa10.4□□□□□ -0.74
SYNE2-213ENST00000554805 PPP1R11O60927 126 aaPredicted RBP10.4□□□□□ -0.74
SYNE2-213ENST00000554805 FLOT1O75955 427 aa10.4□□□□□ -0.74
SYNE2-213ENST00000554805 KIF4AO95239 1232 aa10.4□□□□□ -0.74
SYNE2-213ENST00000554805 GCNT3O95395 438 aa10.4□□□□□ -0.74
SYNE2-213ENST00000554805 CHRM1P11229 460 aaPredicted RBP10.4□□□□□ -0.74
SYNE2-213ENST00000554805 CTNNA1P35221 906 aaKnown RBP10.4□□□□□ -0.74
SYNE2-213ENST00000554805 SEC24CP53992 1094 aa10.4□□□□□ -0.74
SYNE2-213ENST00000554805 TUBB8Q3ZCM7 444 aa10.4□□□□□ -0.74
SYNE2-213ENST00000554805 ZCWPW2Q504Y3 356 aa10.4□□□□□ -0.74
SYNE2-213ENST00000554805 ICE2Q659A1 982 aa10.4□□□□□ -0.74
SYNE2-213ENST00000554805 MICALCLQ6ZW33 695 aa10.4□□□□□ -0.74
SYNE2-213ENST00000554805 ADAT2Q7Z6V5 191 aaKnown RBP10.4□□□□□ -0.74
SYNE2-213ENST00000554805 USP38Q8NB14 1042 aa10.4□□□□□ -0.74
SYNE2-213ENST00000554805 ANO3Q9BYT9 981 aa10.4□□□□□ -0.74
SYNE2-213ENST00000554805 DPH5Q9H2P9 285 aa10.4□□□□□ -0.74
SYNE2-213ENST00000554805 DHX36Q9H2U1 1008 aaKnown RBP10.4□□□□□ -0.74
SYNE2-213ENST00000554805 RREB1Q92766 1687 aa10.4□□□□□ -0.74
SYNE2-213ENST00000554805 GCOM1H8Y6P7 765 aaPredicted RBP10.4□□□□□ -0.74
SYNE2-213ENST00000554805 EDIL3O43854 480 aa10.4□□□□□ -0.74
SYNE2-213ENST00000554805 MED24O75448 989 aa10.4□□□□□ -0.74
SYNE2-213ENST00000554805 H2AFZP0C0S5 128 aa10.4□□□□□ -0.74
SYNE2-213ENST00000554805 MYZAPP0CAP1 466 aa10.4□□□□□ -0.74
SYNE2-213ENST00000554805 RBM5P52756 815 aaKnown RBP eCLIP10.4□□□□□ -0.74
SYNE2-213ENST00000554805 TCP10Q12799 353 aa10.4□□□□□ -0.74
SYNE2-213ENST00000554805 QRICH1Q2TAL8 776 aa10.4□□□□□ -0.74
SYNE2-213ENST00000554805 GPATCH4Q5T3I0 446 aaKnown RBP10.4□□□□□ -0.74
SYNE2-213ENST00000554805 FBXW10Q5XX13 1052 aa10.4□□□□□ -0.74
SYNE2-213ENST00000554805 BARGINQ6ZT62 677 aa10.4□□□□□ -0.74
SYNE2-213ENST00000554805 H2AFVQ71UI9 128 aa10.4□□□□□ -0.74
SYNE2-213ENST00000554805 ZNF571Q7Z3V5 609 aaPredicted RBP10.4□□□□□ -0.74
SYNE2-213ENST00000554805 KRT27Q7Z3Y8 459 aa10.4□□□□□ -0.74
SYNE2-213ENST00000554805 DAAM2Q86T65 1068 aa10.4□□□□□ -0.74
SYNE2-213ENST00000554805 MXD3Q9BW11 206 aa10.4□□□□□ -0.74
SYNE2-213ENST00000554805 SFI1A8K8P3 1242 aa10.39□□□□□ -0.75
SYNE2-213ENST00000554805 CALUO43852 315 aaPredicted RBP10.39□□□□□ -0.75
SYNE2-213ENST00000554805 EPB41P11171 864 aaKnown RBP10.39□□□□□ -0.75
SYNE2-213ENST00000554805 LSP1P33241 339 aa10.39□□□□□ -0.75
SYNE2-213ENST00000554805 IFFO1Q0D2I5 559 aa10.39□□□□□ -0.75
SYNE2-213ENST00000554805 LRRC45Q96CN5 670 aa10.39□□□□□ -0.75
SYNE2-213ENST00000554805 TAF1DQ9H5J8 278 aaPredicted RBP10.39□□□□□ -0.75
SYNE2-213ENST00000554805 COL14A1Q05707 1796 aaKnown RBP10.39□□□□□ -0.75
SYNE2-213ENST00000554805 GFPT2O94808 682 aa10.39□□□□□ -0.75
SYNE2-213ENST00000554805 UCHL3P15374 230 aa10.39□□□□□ -0.75
SYNE2-213ENST00000554805 ABCB4P21439 1286 aa10.39□□□□□ -0.75
SYNE2-213ENST00000554805 CASP5P51878 434 aa10.39□□□□□ -0.75
SYNE2-213ENST00000554805 PSMC6P62333 389 aa10.39□□□□□ -0.75
SYNE2-213ENST00000554805 SETQ01105 290 aaPredicted RBP10.39□□□□□ -0.75
SYNE2-213ENST00000554805 DOK7Q18PE1 504 aa10.39□□□□□ -0.75
SYNE2-213ENST00000554805 PRR5LQ6MZQ0 368 aa10.39□□□□□ -0.75
SYNE2-213ENST00000554805 IQCKQ8N0W5 287 aa10.39□□□□□ -0.75
SYNE2-213ENST00000554805 LMBR1Q8WVP7 490 aa10.39□□□□□ -0.75
SYNE2-213ENST00000554805 ATP6V1G3Q96LB4 118 aa10.39□□□□□ -0.75
SYNE2-213ENST00000554805 INPP4AQ96PE3 977 aaPredicted RBP10.39□□□□□ -0.75
SYNE2-213ENST00000554805 NAP1L4Q99733 375 aaKnown RBP10.39□□□□□ -0.75
SYNE2-213ENST00000554805 GOPCQ9HD26 462 aa10.39□□□□□ -0.75
SYNE2-213ENST00000554805 GRIN2DO15399 1336 aa10.39□□□□□ -0.75
SYNE2-213ENST00000554805 SPDYE3A6NKU9 549 aa10.39□□□□□ -0.75
SYNE2-213ENST00000554805 RBAK-RBAKDNI3L0D1 243 aa10.39□□□□□ -0.75
SYNE2-213ENST00000554805 PGRMC1O00264 195 aaKnown RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms