RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 RBM33Q96EV2 1170 aaKnown RBP3.82□□□□□ -1.8
SEC23A-207ENST00000554615 PGM2Q96G03 612 aa3.82□□□□□ -1.8
SEC23A-207ENST00000554615 MFSD14AQ96MC6 490 aa3.82□□□□□ -1.8
SEC23A-207ENST00000554615 PDZD7Q9H5P4 517 aa3.82□□□□□ -1.8
SEC23A-207ENST00000554615 CNNM1Q9NRU3 951 aa3.82□□□□□ -1.8
SEC23A-207ENST00000554615 ADAM21Q9UKJ8 722 aa3.82□□□□□ -1.8
SEC23A-207ENST00000554615 SLC12A4Q9UP95 1085 aa3.82□□□□□ -1.8
SEC23A-207ENST00000554615 PCDHA13Q9Y5I0 950 aa3.82□□□□□ -1.8
SEC23A-207ENST00000554615 UBIAD1Q9Y5Z9 338 aa3.82□□□□□ -1.8
SEC23A-207ENST00000554615 ACTL7BQ9Y614 415 aa3.82□□□□□ -1.8
SEC23A-207ENST00000554615 A0A087WWV3 80 aa3.82□□□□□ -1.8
SEC23A-207ENST00000554615 ZC3H11AO75152 810 aaKnown RBP eCLIP3.82□□□□□ -1.82e-8■□□□□ 8.8
SEC23A-207ENST00000554615 PPFIA4O75335 1185 aa3.82□□□□□ -1.8
SEC23A-207ENST00000554615 WFS1O76024 890 aa3.82□□□□□ -1.8
SEC23A-207ENST00000554615 EYA4O95677 639 aa3.82□□□□□ -1.8
SEC23A-207ENST00000554615 STAU1O95793 577 aaKnown RBP3.82□□□□□ -1.8
SEC23A-207ENST00000554615 LDHCP07864 332 aa3.82□□□□□ -1.8
SEC23A-207ENST00000554615 WEE2P0C1S8 567 aa3.82□□□□□ -1.8
SEC23A-207ENST00000554615 TMEM253P0C7T8 217 aa3.82□□□□□ -1.8
SEC23A-207ENST00000554615 GAP43P17677 238 aa3.82□□□□□ -1.8
SEC23A-207ENST00000554615 LMOD1P29536 600 aaPredicted RBP3.82□□□□□ -1.8
SEC23A-207ENST00000554615 MARCKSP29966 332 aaPredicted RBP3.82□□□□□ -1.8
SEC23A-207ENST00000554615 GNA11P29992 359 aa3.82□□□□□ -1.8
SEC23A-207ENST00000554615 GYG1P46976 350 aa3.82□□□□□ -1.8
SEC23A-207ENST00000554615 EPHB4P54760 987 aa3.82□□□□□ -1.8
SEC23A-207ENST00000554615 HAND2P61296 217 aa3.82□□□□□ -1.8
SEC23A-207ENST00000554615 CNTN2Q02246 1040 aa3.82□□□□□ -1.8
SEC23A-207ENST00000554615 COASYQ13057 564 aa3.82□□□□□ -1.8
SEC23A-207ENST00000554615 CUL1Q13616 776 aa3.82□□□□□ -1.8
SEC23A-207ENST00000554615 ARHGAP29Q52LW3 1261 aa3.82□□□□□ -1.8
SEC23A-207ENST00000554615 STRIP1Q5VSL9 837 aa3.82□□□□□ -1.8
SEC23A-207ENST00000554615 SH2D5Q6ZV89 423 aa3.82□□□□□ -1.8
SEC23A-207ENST00000554615 ZNF804AQ7Z570 1209 aa3.82□□□□□ -1.8
SEC23A-207ENST00000554615 NT5DC3Q86UY8 548 aa3.82□□□□□ -1.8
SEC23A-207ENST00000554615 LINC01465Q8N7H1 131 aa3.82□□□□□ -1.8
SEC23A-207ENST00000554615 NIPA2Q8N8Q9 360 aa3.82□□□□□ -1.8
SEC23A-207ENST00000554615 SDR42E1Q8WUS8 393 aa3.82□□□□□ -1.8
SEC23A-207ENST00000554615 ATXN2LQ8WWM7 1075 aaKnown RBP3.82□□□□□ -1.8
SEC23A-207ENST00000554615 TSC1Q92574 1164 aa3.82□□□□□ -1.8
SEC23A-207ENST00000554615 CNOT6LQ96LI5 555 aaKnown RBP3.82□□□□□ -1.8
SEC23A-207ENST00000554615 OSBPL9Q96SU4 736 aa3.82□□□□□ -1.8
SEC23A-207ENST00000554615 TUBGCP2Q9BSJ2 902 aa3.82□□□□□ -1.8
SEC23A-207ENST00000554615 CARD6Q9BX69 1037 aa3.82□□□□□ -1.8
SEC23A-207ENST00000554615 MKS1Q9NXB0 559 aa3.82□□□□□ -1.8
SEC23A-207ENST00000554615 AJAP1Q9UKB5 411 aaPredicted RBP3.82□□□□□ -1.8
SEC23A-207ENST00000554615 ZMYND8Q9ULU4 1186 aaPredicted RBP3.82□□□□□ -1.8
SEC23A-207ENST00000554615 CTNND2Q9UQB3 1225 aa3.82□□□□□ -1.8
SEC23A-207ENST00000554615 GDAQ9Y2T3 454 aa3.82□□□□□ -1.8
SEC23A-207ENST00000554615 TRAFD1O14545 582 aaPredicted RBP3.81□□□□□ -1.8
SEC23A-207ENST00000554615 ABLIM1O14639 778 aa3.81□□□□□ -1.8
SEC23A-207ENST00000554615 EIF3HO15372 352 aaKnown RBP eCLIP3.81□□□□□ -1.8
SEC23A-207ENST00000554615 ZPR1O75312 459 aa3.81□□□□□ -1.8
SEC23A-207ENST00000554615 DNAJC8O75937 253 aaPredicted RBP3.81□□□□□ -1.8
SEC23A-207ENST00000554615 KCNA3P22001 575 aa3.81□□□□□ -1.8
SEC23A-207ENST00000554615 ICAM3P32942 547 aa3.81□□□□□ -1.8
SEC23A-207ENST00000554615 ABCD1P33897 745 aa3.81□□□□□ -1.8
SEC23A-207ENST00000554615 NKX3-2P78367 333 aa3.81□□□□□ -1.8
SEC23A-207ENST00000554615 SAFBQ15424 915 aaKnown RBP eCLIP3.81□□□□□ -1.8
SEC23A-207ENST00000554615 CAVIN4Q5BKX8 364 aa3.81□□□□□ -1.8
SEC23A-207ENST00000554615 NOP9Q86U38 636 aaKnown RBP3.81□□□□□ -1.8
SEC23A-207ENST00000554615 FAM83AQ86UY5 434 aa3.81□□□□□ -1.8
SEC23A-207ENST00000554615 SLF2Q8IX21 1173 aa3.81□□□□□ -1.8
SEC23A-207ENST00000554615 DAW1Q8N136 415 aa3.81□□□□□ -1.8
SEC23A-207ENST00000554615 SPC24Q8NBT2 197 aa3.81□□□□□ -1.8
SEC23A-207ENST00000554615 SLC7A14Q8TBB6 771 aa3.81□□□□□ -1.8
SEC23A-207ENST00000554615 DDX54Q8TDD1 881 aaKnown RBP3.81□□□□□ -1.8
SEC23A-207ENST00000554615 MZB1Q8WU39 189 aa3.81□□□□□ -1.8
SEC23A-207ENST00000554615 SLC35C1Q96A29 364 aa3.81□□□□□ -1.8
SEC23A-207ENST00000554615 MCMBPQ9BTE3 642 aa3.81□□□□□ -1.8
SEC23A-207ENST00000554615 NDST4Q9H3R1 872 aa3.81□□□□□ -1.8
SEC23A-207ENST00000554615 ZNF287Q9HBT7 754 aa3.81□□□□□ -1.8
SEC23A-207ENST00000554615 GRHL1Q9NZI5 618 aa3.81□□□□□ -1.8
SEC23A-207ENST00000554615 CALCOCO1Q9P1Z2 691 aa3.81□□□□□ -1.8
SEC23A-207ENST00000554615 NIP7Q9Y221 180 aaKnown RBP eCLIP3.81□□□□□ -1.8
SEC23A-207ENST00000554615 V9GY48 417 aaPredicted RBP3.81□□□□□ -1.8
SEC23A-207ENST00000554615 ATG2AQ2TAZ0 1938 aa3.81□□□□□ -1.8
SEC23A-207ENST00000554615 ZNF233A6NK53 670 aa3.81□□□□□ -1.8
SEC23A-207ENST00000554615 CCDC188H7C350 402 aa3.81□□□□□ -1.8
SEC23A-207ENST00000554615 IRF6O14896 467 aa3.81□□□□□ -1.8
SEC23A-207ENST00000554615 NMT2O60551 498 aa3.81□□□□□ -1.8
SEC23A-207ENST00000554615 TTLL1O95922 423 aa3.81□□□□□ -1.8
SEC23A-207ENST00000554615 FOSP01100 380 aaPredicted RBP3.81□□□□□ -1.8
SEC23A-207ENST00000554615 GSTA1P08263 222 aa3.81□□□□□ -1.8
SEC23A-207ENST00000554615 ABHD2P08910 425 aa3.81□□□□□ -1.8
SEC23A-207ENST00000554615 HOXD8P13378 290 aaPredicted RBP3.81□□□□□ -1.8
SEC23A-207ENST00000554615 MMP13P45452 471 aa3.81□□□□□ -1.8
SEC23A-207ENST00000554615 OAZ1P54368 228 aa3.81□□□□□ -1.8
SEC23A-207ENST00000554615 PTENP60484 403 aa3.81□□□□□ -1.8
SEC23A-207ENST00000554615 FILIP1LQ4L180 1135 aa3.81□□□□□ -1.8
SEC23A-207ENST00000554615 ASRGL1Q7L266 308 aa3.81□□□□□ -1.8
SEC23A-207ENST00000554615 OTOP1Q7RTM1 612 aa3.81□□□□□ -1.8
SEC23A-207ENST00000554615 CABP7Q86V35 215 aa3.81□□□□□ -1.8
SEC23A-207ENST00000554615 IFNLR1Q8IU57 520 aaPredicted RBP3.81□□□□□ -1.8
SEC23A-207ENST00000554615 LNX1Q8TBB1 728 aaPredicted RBP3.81□□□□□ -1.8
SEC23A-207ENST00000554615 CLEC4DQ8WXI8 215 aa3.81□□□□□ -1.8
SEC23A-207ENST00000554615 SPOCK2Q92563 424 aa3.81□□□□□ -1.8
SEC23A-207ENST00000554615 LARP4BQ92615 738 aaKnown RBP3.81□□□□□ -1.8
SEC23A-207ENST00000554615 AVENQ9NQS1 362 aaPredicted RBP3.81□□□□□ -1.8
SEC23A-207ENST00000554615 AGPAT5Q9NUQ2 364 aa3.81□□□□□ -1.8
SEC23A-207ENST00000554615 TYW1Q9NV66 732 aaKnown RBP3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms