RNA–Protein interactions for RNA: ENST00000554453.5

ABCD4-221, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-221ENST00000554453 ZNF76P36508 570 aa12.68□□□□□ -0.38
ABCD4-221ENST00000554453 STAT5BP51692 787 aa12.68□□□□□ -0.38
ABCD4-221ENST00000554453 ACTR2P61160 394 aa12.68□□□□□ -0.38
ABCD4-221ENST00000554453 MRPS5P82675 430 aaKnown RBP12.68□□□□□ -0.38
ABCD4-221ENST00000554453 HTRA4P83105 476 aaPredicted RBP12.68□□□□□ -0.38
ABCD4-221ENST00000554453 PPFIA1Q13136 1202 aa12.68□□□□□ -0.38
ABCD4-221ENST00000554453 GRIK4Q16099 956 aa12.68□□□□□ -0.38
ABCD4-221ENST00000554453 JAKMIP3Q5VZ66 844 aa12.68□□□□□ -0.38
ABCD4-221ENST00000554453 RSPH3Q86UC2 560 aa12.68□□□□□ -0.38
ABCD4-221ENST00000554453 CCDC12Q8WUD4 166 aaPredicted RBP12.68□□□□□ -0.38
ABCD4-221ENST00000554453 CRYGNQ8WXF5 182 aa12.68□□□□□ -0.38
ABCD4-221ENST00000554453 APBB2Q92870 758 aa12.68□□□□□ -0.38
ABCD4-221ENST00000554453 TOP1MTQ969P6 601 aa12.68□□□□□ -0.38
ABCD4-221ENST00000554453 ASB2Q96Q27 587 aa12.68□□□□□ -0.38
ABCD4-221ENST00000554453 TGS1Q96RS0 853 aaKnown RBP12.68□□□□□ -0.38
ABCD4-221ENST00000554453 TSPYL2Q9H2G4 693 aaPredicted RBP12.68□□□□□ -0.38
ABCD4-221ENST00000554453 AZI2Q9H6S1 392 aa12.68□□□□□ -0.38
ABCD4-221ENST00000554453 ZSWIM6Q9HCJ5 1215 aa12.68□□□□□ -0.38
ABCD4-221ENST00000554453 AGO4Q9HCK5 861 aaKnown RBP12.68□□□□□ -0.38
ABCD4-221ENST00000554453 C6orf50Q9HD87 102 aa12.68□□□□□ -0.38
ABCD4-221ENST00000554453 LMCD1Q9NZU5 365 aa12.68□□□□□ -0.38
ABCD4-221ENST00000554453 MYH9P35579 1960 aaKnown RBP12.68□□□□□ -0.38
ABCD4-221ENST00000554453 CHD7Q9P2D1 2997 aa12.68□□□□□ -0.38
ABCD4-221ENST00000554453 IGKV6D-21A0A0A0MT36 114 aa12.67□□□□□ -0.38
ABCD4-221ENST00000554453 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.67□□□□□ -0.38
ABCD4-221ENST00000554453 LINC01553A4QN01 128 aa12.67□□□□□ -0.38
ABCD4-221ENST00000554453 RBAK-RBAKDNI3L0D1 243 aa12.67□□□□□ -0.38
ABCD4-221ENST00000554453 DHX15O43143 795 aaKnown RBP12.67□□□□□ -0.38
ABCD4-221ENST00000554453 RPLP2P05387 115 aaKnown RBP12.67□□□□□ -0.38
ABCD4-221ENST00000554453 CTSHP09668 335 aa12.67□□□□□ -0.38
ABCD4-221ENST00000554453 MARK3P27448 753 aa12.67□□□□□ -0.38
ABCD4-221ENST00000554453 GNA11P29992 359 aa12.67□□□□□ -0.38
ABCD4-221ENST00000554453 AKAP17AQ02040 695 aaKnown RBP12.67□□□□□ -0.38
ABCD4-221ENST00000554453 GRB10Q13322 594 aa12.67□□□□□ -0.38
ABCD4-221ENST00000554453 ITGB3BPQ13352 177 aaPredicted RBP12.67□□□□□ -0.38
ABCD4-221ENST00000554453 FAM117BQ6P1L5 589 aa12.67□□□□□ -0.38
ABCD4-221ENST00000554453 RUFY4Q6ZNE9 571 aa12.67□□□□□ -0.38
ABCD4-221ENST00000554453 RUFY3Q7L099 469 aa12.67□□□□□ -0.38
ABCD4-221ENST00000554453 SPRED2Q7Z698 418 aa12.67□□□□□ -0.38
ABCD4-221ENST00000554453 PLA2G4DQ86XP0 818 aa12.67□□□□□ -0.38
ABCD4-221ENST00000554453 MYOCDQ8IZQ8 938 aa12.67□□□□□ -0.38
ABCD4-221ENST00000554453 TM6SF1Q9BZW5 370 aa12.67□□□□□ -0.38
ABCD4-221ENST00000554453 SUGCTQ9HAC7 445 aa12.67□□□□□ -0.38
ABCD4-221ENST00000554453 THEGQ9P2T0 379 aa12.67□□□□□ -0.38
ABCD4-221ENST00000554453 NID2Q14112 1375 aa12.67□□□□□ -0.38
ABCD4-221ENST00000554453 TCF20Q9UGU0 1960 aaKnown RBP12.67□□□□□ -0.38
ABCD4-221ENST00000554453 FAM86B1E9PN63 330 aa12.66□□□□□ -0.38
ABCD4-221ENST00000554453 ADAMTS3O15072 1205 aa12.66□□□□□ -0.38
ABCD4-221ENST00000554453 FAM86B2P0C5J1 330 aa12.66□□□□□ -0.38
ABCD4-221ENST00000554453 CIITAP33076 1130 aa12.66□□□□□ -0.38
ABCD4-221ENST00000554453 SLC26A2P50443 739 aa12.66□□□□□ -0.38
ABCD4-221ENST00000554453 MGAT3Q09327 533 aa12.66□□□□□ -0.38
ABCD4-221ENST00000554453 PLCB4Q15147 1175 aa12.66□□□□□ -0.38
ABCD4-221ENST00000554453 KRT40Q6A162 431 aa12.66□□□□□ -0.38
ABCD4-221ENST00000554453 ABHD15Q6UXT9 468 aa12.66□□□□□ -0.38
ABCD4-221ENST00000554453 SP7Q8TDD2 431 aaPredicted RBP12.66□□□□□ -0.38
ABCD4-221ENST00000554453 DNAJB3Q8WWF6 145 aa12.66□□□□□ -0.38
ABCD4-221ENST00000554453 RNF26Q9BY78 433 aaPredicted RBP12.66□□□□□ -0.38
ABCD4-221ENST00000554453 IFIH1Q9BYX4 1025 aaKnown RBP12.66□□□□□ -0.38
ABCD4-221ENST00000554453 TUBE1Q9UJT0 475 aa12.66□□□□□ -0.38
ABCD4-221ENST00000554453 PCDHA2Q9Y5H9 948 aa12.66□□□□□ -0.38
ABCD4-221ENST00000554453 SQORQ9Y6N5 450 aa12.66□□□□□ -0.38
ABCD4-221ENST00000554453 CDH23Q9H251 3354 aa12.65□□□□□ -0.38
ABCD4-221ENST00000554453 IGLV3-22A0A075B6J6 115 aa12.65□□□□□ -0.38
ABCD4-221ENST00000554453 POTEB3A0JP26 581 aa12.65□□□□□ -0.38
ABCD4-221ENST00000554453 ENPP3O14638 875 aa12.65□□□□□ -0.38
ABCD4-221ENST00000554453 HBP1O60381 514 aa12.65□□□□□ -0.38
ABCD4-221ENST00000554453 CCNE2O96020 404 aa12.65□□□□□ -0.38
ABCD4-221ENST00000554453 TOB2Q14106 344 aaPredicted RBP12.65□□□□□ -0.38
ABCD4-221ENST00000554453 IER5Q5VY09 327 aa12.65□□□□□ -0.38
ABCD4-221ENST00000554453 POTEBQ6S5H4 581 aa12.65□□□□□ -0.38
ABCD4-221ENST00000554453 NME8Q8N427 588 aa12.65□□□□□ -0.38
ABCD4-221ENST00000554453 BICD2Q8TD16 824 aa12.65□□□□□ -0.38
ABCD4-221ENST00000554453 PHKBQ93100 1093 aa12.65□□□□□ -0.38
ABCD4-221ENST00000554453 ZNF274Q96GC6 653 aaPredicted RBP12.65□□□□□ -0.38
ABCD4-221ENST00000554453 SH3GLB2Q9NR46 395 aa12.65□□□□□ -0.38
ABCD4-221ENST00000554453 TBC1D22BQ9NU19 505 aa12.65□□□□□ -0.38
ABCD4-221ENST00000554453 CYP46A1Q9Y6A2 500 aa12.65□□□□□ -0.38
ABCD4-221ENST00000554453 SMIM35A0A1B0GVV1 85 aa12.64□□□□□ -0.39
ABCD4-221ENST00000554453 IPO5O00410 1097 aaKnown RBP12.64□□□□□ -0.39
ABCD4-221ENST00000554453 EDIL3O43854 480 aa12.64□□□□□ -0.39
ABCD4-221ENST00000554453 NEFLP07196 543 aa12.64□□□□□ -0.39
ABCD4-221ENST00000554453 GHRP10912 638 aa12.64□□□□□ -0.39
ABCD4-221ENST00000554453 BMP1P13497 986 aa12.64□□□□□ -0.39
ABCD4-221ENST00000554453 IGBP1P78318 339 aa12.64□□□□□ -0.39
ABCD4-221ENST00000554453 CCT2P78371 535 aaKnown RBP12.64□□□□□ -0.39
ABCD4-221ENST00000554453 LPIN1Q14693 890 aa12.64□□□□□ -0.39
ABCD4-221ENST00000554453 FBXO47Q5MNV8 452 aa12.64□□□□□ -0.39
ABCD4-221ENST00000554453 FAM43BQ6ZT52 329 aaPredicted RBP12.64□□□□□ -0.39
ABCD4-221ENST00000554453 REXO1Q8N1G1 1221 aaKnown RBP12.64□□□□□ -0.39
ABCD4-221ENST00000554453 MICALL1Q8N3F8 863 aa12.64□□□□□ -0.39
ABCD4-221ENST00000554453 SLC26A6Q9BXS9 759 aa12.64□□□□□ -0.39
ABCD4-221ENST00000554453 COG5Q9UP83 839 aa12.64□□□□□ -0.39
ABCD4-221ENST00000554453 CDY2AQ9Y6F7 541 aa12.64□□□□□ -0.39
ABCD4-221ENST00000554453 LOXHD1Q8IVV2 1947 aa12.64□□□□□ -0.39
ABCD4-221ENST00000554453 UNC80Q8N2C7 3258 aa12.63□□□□□ -0.39
ABCD4-221ENST00000554453 UPP2O95045 317 aa12.63□□□□□ -0.39
ABCD4-221ENST00000554453 KLRC1P26715 233 aa12.63□□□□□ -0.39
ABCD4-221ENST00000554453 USP11P51784 963 aa12.63□□□□□ -0.39
ABCD4-221ENST00000554453 MRPS6P82932 125 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms