RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 ATP2A2P16615 1042 aaKnown RBP11.87□□□□□ -0.51
PTCD2P1-201ENST00000554393 ARHGAP4P98171 946 aa11.87□□□□□ -0.51
PTCD2P1-201ENST00000554393 HIC1Q14526 733 aa11.87□□□□□ -0.51
PTCD2P1-201ENST00000554393 CNKSR3Q6P9H4 555 aa11.87□□□□□ -0.51
PTCD2P1-201ENST00000554393 TRAF7Q6Q0C0 670 aa11.87□□□□□ -0.51
PTCD2P1-201ENST00000554393 TRIM50Q86XT4 487 aa11.87□□□□□ -0.51
PTCD2P1-201ENST00000554393 TRIM22Q8IYM9 498 aa11.87□□□□□ -0.51
PTCD2P1-201ENST00000554393 REXO1Q8N1G1 1221 aaKnown RBP11.87□□□□□ -0.51
PTCD2P1-201ENST00000554393 ATP6V0A1Q93050 837 aa11.87□□□□□ -0.51
PTCD2P1-201ENST00000554393 PHKBQ93100 1093 aa11.87□□□□□ -0.51
PTCD2P1-201ENST00000554393 IL17RAQ96F46 866 aa11.87□□□□□ -0.51
PTCD2P1-201ENST00000554393 SDF4Q9BRK5 362 aa11.87□□□□□ -0.51
PTCD2P1-201ENST00000554393 FTOQ9C0B1 505 aaKnown RBP eCLIP11.87□□□□□ -0.51
PTCD2P1-201ENST00000554393 RNPEPQ9H4A4 650 aa11.87□□□□□ -0.51
PTCD2P1-201ENST00000554393 ZNF576Q9H609 170 aa11.87□□□□□ -0.51
PTCD2P1-201ENST00000554393 JPH1Q9HDC5 661 aaPredicted RBP11.87□□□□□ -0.51
PTCD2P1-201ENST00000554393 SH3GLB2Q9NR46 395 aa11.87□□□□□ -0.51
PTCD2P1-201ENST00000554393 ERAP1Q9NZ08 941 aa11.87□□□□□ -0.51
PTCD2P1-201ENST00000554393 PCDHA11Q9Y5I1 949 aa11.87□□□□□ -0.51
PTCD2P1-201ENST00000554393 NRCAMQ92823 1304 aa11.86□□□□□ -0.51
PTCD2P1-201ENST00000554393 CHD9Q3L8U1 2897 aa11.86□□□□□ -0.51
PTCD2P1-201ENST00000554393 SIP14410 1827 aa11.86□□□□□ -0.51
PTCD2P1-201ENST00000554393 GSTTP1A0A1W2PQM5 241 aa11.86□□□□□ -0.51
PTCD2P1-201ENST00000554393 EFCAB14O75071 495 aa11.86□□□□□ -0.51
PTCD2P1-201ENST00000554393 LGR5O75473 907 aa11.86□□□□□ -0.51
PTCD2P1-201ENST00000554393 PBX2P40425 430 aa11.86□□□□□ -0.51
PTCD2P1-201ENST00000554393 CCT2P78371 535 aaKnown RBP11.86□□□□□ -0.51
PTCD2P1-201ENST00000554393 ADAM17P78536 824 aa11.86□□□□□ -0.51
PTCD2P1-201ENST00000554393 ZNF200P98182 395 aaPredicted RBP11.86□□□□□ -0.51
PTCD2P1-201ENST00000554393 SP4Q02446 784 aa11.86□□□□□ -0.51
PTCD2P1-201ENST00000554393 GPNMBQ14956 572 aa11.86□□□□□ -0.51
PTCD2P1-201ENST00000554393 ZNF618Q5T7W0 954 aa11.86□□□□□ -0.51
PTCD2P1-201ENST00000554393 UTP14CQ5TAP6 766 aaKnown RBP11.86□□□□□ -0.51
PTCD2P1-201ENST00000554393 CPLX2Q6PUV4 134 aaKnown RBP11.86□□□□□ -0.51
PTCD2P1-201ENST00000554393 LMBR1Q8WVP7 490 aa11.86□□□□□ -0.51
PTCD2P1-201ENST00000554393 WNT8BQ93098 351 aa11.86□□□□□ -0.51
PTCD2P1-201ENST00000554393 PGBD1Q96JS3 809 aa11.86□□□□□ -0.51
PTCD2P1-201ENST00000554393 SLC26A6Q9BXS9 759 aa11.86□□□□□ -0.51
PTCD2P1-201ENST00000554393 UPF3BQ9BZI7 483 aaKnown RBP11.86□□□□□ -0.51
PTCD2P1-201ENST00000554393 SMARCAD1Q9H4L7 1026 aa11.86□□□□□ -0.51
PTCD2P1-201ENST00000554393 AGO4Q9HCK5 861 aaKnown RBP11.86□□□□□ -0.51
PTCD2P1-201ENST00000554393 PDRG1Q9NUG6 133 aa11.86□□□□□ -0.51
PTCD2P1-201ENST00000554393 TMEM260Q9NX78 707 aa11.86□□□□□ -0.51
PTCD2P1-201ENST00000554393 SLC9A2Q9UBY0 812 aa11.86□□□□□ -0.51
PTCD2P1-201ENST00000554393 BOLA1Q9Y3E2 137 aa11.86□□□□□ -0.51
PTCD2P1-201ENST00000554393 TELO2Q9Y4R8 837 aa11.86□□□□□ -0.51
PTCD2P1-201ENST00000554393 IGLV3-22A0A075B6J6 115 aa11.85□□□□□ -0.51
PTCD2P1-201ENST00000554393 ABHD14A-ACY1A0A1B0GW23 586 aa11.85□□□□□ -0.51
PTCD2P1-201ENST00000554393 CPLX1O14810 134 aa11.85□□□□□ -0.51
PTCD2P1-201ENST00000554393 TREHO43280 583 aa11.85□□□□□ -0.51
PTCD2P1-201ENST00000554393 NBNO60934 754 aa11.85□□□□□ -0.51
PTCD2P1-201ENST00000554393 RPLP2P05387 115 aaKnown RBP11.85□□□□□ -0.51
PTCD2P1-201ENST00000554393 ZNF76P36508 570 aa11.85□□□□□ -0.51
PTCD2P1-201ENST00000554393 THPOP40225 353 aa11.85□□□□□ -0.51
PTCD2P1-201ENST00000554393 SETQ01105 290 aaPredicted RBP11.85□□□□□ -0.51
PTCD2P1-201ENST00000554393 JAKMIP3Q5VZ66 844 aa11.85□□□□□ -0.51
PTCD2P1-201ENST00000554393 RPAINQ86UA6 219 aa11.85□□□□□ -0.51
PTCD2P1-201ENST00000554393 CYP2W1Q8TAV3 490 aa11.85□□□□□ -0.51
PTCD2P1-201ENST00000554393 TNPO1Q92973 898 aaKnown RBP11.85□□□□□ -0.51
PTCD2P1-201ENST00000554393 TMEM121BQ9BXQ6 578 aaPredicted RBP11.85□□□□□ -0.51
PTCD2P1-201ENST00000554393 SLC28A3Q9HAS3 691 aa11.85□□□□□ -0.51
PTCD2P1-201ENST00000554393 NCOA5Q9HCD5 579 aaKnown RBP11.85□□□□□ -0.51
PTCD2P1-201ENST00000554393 SETD4Q9NVD3 440 aa11.85□□□□□ -0.51
PTCD2P1-201ENST00000554393 CACNA1AO00555 2505 aa11.84□□□□□ -0.51
PTCD2P1-201ENST00000554393 RSPH10B2B2RC85 870 aa11.84□□□□□ -0.51
PTCD2P1-201ENST00000554393 FAM86B1E9PN63 330 aa11.84□□□□□ -0.51
PTCD2P1-201ENST00000554393 ATG7O95352 703 aa11.84□□□□□ -0.51
PTCD2P1-201ENST00000554393 DEXIO95424 95 aa11.84□□□□□ -0.51
PTCD2P1-201ENST00000554393 FAM86B2P0C5J1 330 aa11.84□□□□□ -0.51
PTCD2P1-201ENST00000554393 RSPH10BP0C881 870 aa11.84□□□□□ -0.51
PTCD2P1-201ENST00000554393 ARP10275 920 aa11.84□□□□□ -0.51
PTCD2P1-201ENST00000554393 FOSL2P15408 326 aa11.84□□□□□ -0.51
PTCD2P1-201ENST00000554393 CIITAP33076 1130 aa11.84□□□□□ -0.51
PTCD2P1-201ENST00000554393 KCNJ6P48051 423 aa11.84□□□□□ -0.51
PTCD2P1-201ENST00000554393 SLC26A2P50443 739 aa11.84□□□□□ -0.51
PTCD2P1-201ENST00000554393 ACTR2P61160 394 aa11.84□□□□□ -0.51
PTCD2P1-201ENST00000554393 WDR5P61964 334 aaKnown RBP11.84□□□□□ -0.51
PTCD2P1-201ENST00000554393 SSRP1Q08945 709 aaKnown RBP11.84□□□□□ -0.51
PTCD2P1-201ENST00000554393 ITGB3BPQ13352 177 aaPredicted RBP11.84□□□□□ -0.51
PTCD2P1-201ENST00000554393 MBTPS1Q14703 1052 aa11.84□□□□□ -0.51
PTCD2P1-201ENST00000554393 GRIN2CQ14957 1233 aa11.84□□□□□ -0.51
PTCD2P1-201ENST00000554393 ANKRD1Q15327 319 aa11.84□□□□□ -0.51
PTCD2P1-201ENST00000554393 TAF2Q6P1X5 1199 aa11.84□□□□□ -0.51
PTCD2P1-201ENST00000554393 PLPPR4Q7Z2D5 763 aa11.84□□□□□ -0.51
PTCD2P1-201ENST00000554393 PLA2G4DQ86XP0 818 aa11.84□□□□□ -0.51
PTCD2P1-201ENST00000554393 HERC6Q8IVU3 1022 aa11.84□□□□□ -0.51
PTCD2P1-201ENST00000554393 MYLIPQ8WY64 445 aa11.84□□□□□ -0.51
PTCD2P1-201ENST00000554393 GLG1Q92896 1179 aa11.84□□□□□ -0.51
PTCD2P1-201ENST00000554393 C22orf23Q9BZE7 217 aa11.84□□□□□ -0.51
PTCD2P1-201ENST00000554393 AZI2Q9H6S1 392 aa11.84□□□□□ -0.51
PTCD2P1-201ENST00000554393 PKD2L1Q9P0L9 805 aa11.84□□□□□ -0.51
PTCD2P1-201ENST00000554393 VPS54Q9P1Q0 977 aa11.84□□□□□ -0.51
PTCD2P1-201ENST00000554393 YBX2Q9Y2T7 364 aaKnown RBP11.84□□□□□ -0.51
PTCD2P1-201ENST00000554393 IGKV6D-21A0A0A0MT36 114 aa11.83□□□□□ -0.52
PTCD2P1-201ENST00000554393 MBLAC1A4D2B0 266 aaPredicted RBP11.83□□□□□ -0.52
PTCD2P1-201ENST00000554393 RRN3P2A6NIE6 340 aa11.83□□□□□ -0.52
PTCD2P1-201ENST00000554393 IPO5O00410 1097 aaKnown RBP11.83□□□□□ -0.52
PTCD2P1-201ENST00000554393 CDKL5O76039 1030 aa11.83□□□□□ -0.52
PTCD2P1-201ENST00000554393 PPFIA1Q13136 1202 aa11.83□□□□□ -0.52
PTCD2P1-201ENST00000554393 IKBKEQ14164 716 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms