RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 SLC8A3P57103 927 aa18.52■□□□□ 0.56
PPP4R3A-202ENST00000554390 ERVK-9P63128 1117 aa18.52■□□□□ 0.56
PPP4R3A-202ENST00000554390 IRX1P78414 480 aaPredicted RBP18.52■□□□□ 0.56
PPP4R3A-202ENST00000554390 PPP1R7Q15435 360 aa18.52■□□□□ 0.56
PPP4R3A-202ENST00000554390 CENPPQ6IPU0 288 aa18.52■□□□□ 0.56
PPP4R3A-202ENST00000554390 IQCDQ96DY2 449 aa18.52■□□□□ 0.56
PPP4R3A-202ENST00000554390 ZMYND12Q9H0C1 365 aa18.52■□□□□ 0.56
PPP4R3A-202ENST00000554390 A0A087X0T9 212 aa18.51■□□□□ 0.55
PPP4R3A-202ENST00000554390 GRID2IPA4D2P6 1211 aa18.51■□□□□ 0.55
PPP4R3A-202ENST00000554390 KIF3CO14782 793 aa18.51■□□□□ 0.55
PPP4R3A-202ENST00000554390 FAM228BP0C875 321 aa18.51■□□□□ 0.55
PPP4R3A-202ENST00000554390 PCP11498 1178 aaKnown RBP18.51■□□□□ 0.55
PPP4R3A-202ENST00000554390 CALRP27797 417 aaKnown RBP18.51■□□□□ 0.55
PPP4R3A-202ENST00000554390 ECHS1P30084 290 aa18.51■□□□□ 0.55
PPP4R3A-202ENST00000554390 BTDP43251 543 aa18.51■□□□□ 0.55
PPP4R3A-202ENST00000554390 BIRC3Q13489 604 aa18.51■□□□□ 0.55
PPP4R3A-202ENST00000554390 ASTE1Q2TB18 679 aaPredicted RBP18.51■□□□□ 0.55
PPP4R3A-202ENST00000554390 RUFY4Q6ZNE9 571 aa18.51■□□□□ 0.55
PPP4R3A-202ENST00000554390 CUL5Q93034 780 aa18.51■□□□□ 0.55
PPP4R3A-202ENST00000554390 STAMBPL1Q96FJ0 436 aa18.51■□□□□ 0.55
PPP4R3A-202ENST00000554390 INPP4AQ96PE3 977 aaPredicted RBP18.51■□□□□ 0.55
PPP4R3A-202ENST00000554390 AP1M1Q9BXS5 423 aa18.51■□□□□ 0.55
PPP4R3A-202ENST00000554390 ISCUQ9H1K1 167 aa18.51■□□□□ 0.55
PPP4R3A-202ENST00000554390 KDM4CQ9H3R0 1056 aa18.51■□□□□ 0.55
PPP4R3A-202ENST00000554390 STAT3P40763 770 aa18.51■□□□□ 0.55
PPP4R3A-202ENST00000554390 SBK1Q52WX2 424 aa18.51■□□□□ 0.55
PPP4R3A-202ENST00000554390 ARMC9Q7Z3E5 817 aa18.51■□□□□ 0.55
PPP4R3A-202ENST00000554390 MAB21L3Q8N8X9 362 aa18.51■□□□□ 0.55
PPP4R3A-202ENST00000554390 SETDB2Q96T68 719 aa18.51■□□□□ 0.55
PPP4R3A-202ENST00000554390 C6orf50Q9HD87 102 aa18.51■□□□□ 0.55
PPP4R3A-202ENST00000554390 DCDC2CA8MYV0 355 aa18.51■□□□□ 0.55
PPP4R3A-202ENST00000554390 BUB1BO60566 1050 aaPredicted RBP18.51■□□□□ 0.55
PPP4R3A-202ENST00000554390 SNAP25P60880 206 aa18.51■□□□□ 0.55
PPP4R3A-202ENST00000554390 HGSNATQ68CP4 663 aa18.51■□□□□ 0.55
PPP4R3A-202ENST00000554390 CHADLQ6NUI6 762 aa18.51■□□□□ 0.55
PPP4R3A-202ENST00000554390 TAX1BP1Q86VP1 789 aa18.51■□□□□ 0.55
PPP4R3A-202ENST00000554390 EGFL6Q8IUX8 553 aa18.51■□□□□ 0.55
PPP4R3A-202ENST00000554390 NSMCE1Q8WV22 266 aa18.51■□□□□ 0.55
PPP4R3A-202ENST00000554390 THOC1Q96FV9 657 aaKnown RBP18.51■□□□□ 0.55
PPP4R3A-202ENST00000554390 BCS1LQ9Y276 419 aa18.51■□□□□ 0.55
PPP4R3A-202ENST00000554390 PPIP5K2O43314 1243 aa18.5■□□□□ 0.55
PPP4R3A-202ENST00000554390 MYL1P05976 194 aa18.5■□□□□ 0.55
PPP4R3A-202ENST00000554390 GHRP10912 638 aa18.5■□□□□ 0.55
PPP4R3A-202ENST00000554390 TNNC1P63316 161 aa18.5■□□□□ 0.55
PPP4R3A-202ENST00000554390 MYO1EQ12965 1108 aa18.5■□□□□ 0.55
PPP4R3A-202ENST00000554390 MAN2A1Q16706 1144 aa18.5■□□□□ 0.55
PPP4R3A-202ENST00000554390 SHROOM1Q2M3G4 852 aaPredicted RBP18.5■□□□□ 0.55
PPP4R3A-202ENST00000554390 LRRC55Q6ZSA7 311 aa18.5■□□□□ 0.55
PPP4R3A-202ENST00000554390 P3H4Q92791 437 aa18.5■□□□□ 0.55
PPP4R3A-202ENST00000554390 HOOK2Q96ED9 719 aa18.5■□□□□ 0.55
PPP4R3A-202ENST00000554390 GNPATO15228 680 aa18.5■□□□□ 0.55
PPP4R3A-202ENST00000554390 PAEPP09466 180 aa18.5■□□□□ 0.55
PPP4R3A-202ENST00000554390 MYBP10242 640 aa18.5■□□□□ 0.55
PPP4R3A-202ENST00000554390 KIAA0753Q2KHM9 967 aa18.5■□□□□ 0.55
PPP4R3A-202ENST00000554390 C11orf91Q3C1V1 193 aa18.5■□□□□ 0.55
PPP4R3A-202ENST00000554390 ADAT2Q7Z6V5 191 aaKnown RBP18.5■□□□□ 0.55
PPP4R3A-202ENST00000554390 UBLCP1Q8WVY7 318 aaPredicted RBP18.5■□□□□ 0.55
PPP4R3A-202ENST00000554390 LRRC45Q96CN5 670 aa18.5■□□□□ 0.55
PPP4R3A-202ENST00000554390 SH3GLB2Q9NR46 395 aa18.5■□□□□ 0.55
PPP4R3A-202ENST00000554390 MEIS1O00470 390 aa18.49■□□□□ 0.55
PPP4R3A-202ENST00000554390 DRD4P21917 467 aa18.49■□□□□ 0.55
PPP4R3A-202ENST00000554390 MAGOHP61326 146 aaKnown RBP18.49■□□□□ 0.55
PPP4R3A-202ENST00000554390 GRIK3Q13003 919 aa18.49■□□□□ 0.55
PPP4R3A-202ENST00000554390 ZKSCAN8Q15776 578 aaPredicted RBP18.49■□□□□ 0.55
PPP4R3A-202ENST00000554390 FAM83BQ5T0W9 1011 aa18.49■□□□□ 0.55
PPP4R3A-202ENST00000554390 USP38Q8NB14 1042 aa18.49■□□□□ 0.55
PPP4R3A-202ENST00000554390 MAGOHBQ96A72 148 aaKnown RBP18.49■□□□□ 0.55
PPP4R3A-202ENST00000554390 PCNTO95613 3336 aa18.49■□□□□ 0.55
PPP4R3A-202ENST00000554390 NOL4O94818 638 aa18.49■□□□□ 0.55
PPP4R3A-202ENST00000554390 PDXDC1Q6P996 788 aa18.49■□□□□ 0.55
PPP4R3A-202ENST00000554390 KRT25Q7Z3Z0 450 aa18.49■□□□□ 0.55
PPP4R3A-202ENST00000554390 LRRC4CQ9HCJ2 640 aa18.49■□□□□ 0.55
PPP4R3A-202ENST00000554390 FAM196BA6NMK8 535 aa18.48■□□□□ 0.55
PPP4R3A-202ENST00000554390 GCKP35557 465 aa18.48■□□□□ 0.55
PPP4R3A-202ENST00000554390 MEI1Q5TIA1 1274 aa18.48■□□□□ 0.55
PPP4R3A-202ENST00000554390 TCP11Q8WWU5 503 aa18.48■□□□□ 0.55
PPP4R3A-202ENST00000554390 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.48■□□□□ 0.55
PPP4R3A-202ENST00000554390 NEUROG2Q9H2A3 272 aa18.48■□□□□ 0.55
PPP4R3A-202ENST00000554390 TRIM37O94972 964 aa18.48■□□□□ 0.55
PPP4R3A-202ENST00000554390 AMPD3Q01432 767 aa18.48■□□□□ 0.55
PPP4R3A-202ENST00000554390 FAM98CQ17RN3 349 aaKnown RBP18.48■□□□□ 0.55
PPP4R3A-202ENST00000554390 AGBL2Q5U5Z8 902 aa18.48■□□□□ 0.55
PPP4R3A-202ENST00000554390 TRIM31Q9BZY9 425 aa18.48■□□□□ 0.55
PPP4R3A-202ENST00000554390 EBF2Q9HAK2 575 aa18.48■□□□□ 0.55
PPP4R3A-202ENST00000554390 FBXL5Q9UKA1 691 aa18.48■□□□□ 0.55
PPP4R3A-202ENST00000554390 DLEC1Q9Y238 1755 aa18.48■□□□□ 0.55
PPP4R3A-202ENST00000554390 CCT8L1PA6NM43 557 aa18.48■□□□□ 0.55
PPP4R3A-202ENST00000554390 USP17L15C9J2P7 530 aa18.48■□□□□ 0.55
PPP4R3A-202ENST00000554390 USP17L13C9JLJ4 530 aa18.48■□□□□ 0.55
PPP4R3A-202ENST00000554390 USP17L11C9JVI0 530 aa18.48■□□□□ 0.55
PPP4R3A-202ENST00000554390 USP17L18D6R9N7 530 aa18.48■□□□□ 0.55
PPP4R3A-202ENST00000554390 USP17L22D6RA61 530 aa18.48■□□□□ 0.55
PPP4R3A-202ENST00000554390 USP17L17D6RBQ6 530 aa18.48■□□□□ 0.55
PPP4R3A-202ENST00000554390 USP17L19D6RCP7 530 aa18.48■□□□□ 0.55
PPP4R3A-202ENST00000554390 USP17L20D6RJB6 530 aa18.48■□□□□ 0.55
PPP4R3A-202ENST00000554390 FLT3P36888 993 aa18.48■□□□□ 0.55
PPP4R3A-202ENST00000554390 GNAQP50148 359 aa18.48■□□□□ 0.55
PPP4R3A-202ENST00000554390 USP17L24Q0WX57 530 aa18.48■□□□□ 0.55
PPP4R3A-202ENST00000554390 GJB7Q6PEY0 223 aa18.48■□□□□ 0.55
PPP4R3A-202ENST00000554390 USP17L6PQ6QN14 398 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms