RNA–Protein interactions for RNA: ENST00000554116.5

TUBB3-204, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-204ENST00000554116 MYL10Q9BUA6 226 aa13.32□□□□□ -0.28
TUBB3-204ENST00000554116 ADGRA3Q8IWK6 1321 aa13.32□□□□□ -0.28
TUBB3-204ENST00000554116 SPTBN4Q9H254 2564 aa13.31□□□□□ -0.28
TUBB3-204ENST00000554116 FRYLO94915 3013 aa13.31□□□□□ -0.28
TUBB3-204ENST00000554116 DGKIO75912 1065 aa13.31□□□□□ -0.28
TUBB3-204ENST00000554116 ADAM15Q13444 863 aa13.31□□□□□ -0.28
TUBB3-204ENST00000554116 WTAPQ15007 396 aa13.31□□□□□ -0.28
TUBB3-204ENST00000554116 EP400NLQ6ZTU2 488 aa13.31□□□□□ -0.28
TUBB3-204ENST00000554116 SRBD1Q8N5C6 995 aaKnown RBP13.31□□□□□ -0.28
TUBB3-204ENST00000554116 MSLNLQ96KJ4 702 aa13.31□□□□□ -0.28
TUBB3-204ENST00000554116 POP1Q99575 1024 aaKnown RBP13.31□□□□□ -0.28
TUBB3-204ENST00000554116 SPZ1Q9BXG8 430 aa13.31□□□□□ -0.28
TUBB3-204ENST00000554116 LMAN2LQ9H0V9 348 aa13.31□□□□□ -0.28
TUBB3-204ENST00000554116 LY9Q9HBG7 655 aa13.31□□□□□ -0.28
TUBB3-204ENST00000554116 ALG13Q9NP73 1137 aaKnown RBP13.31□□□□□ -0.28
TUBB3-204ENST00000554116 PLAGL2Q9UPG8 496 aa13.31□□□□□ -0.28
TUBB3-204ENST00000554116 PLEKHA8P1O95397 391 aa13.3□□□□□ -0.28
TUBB3-204ENST00000554116 MARK3P27448 753 aa13.3□□□□□ -0.28
TUBB3-204ENST00000554116 TRAF1Q13077 416 aa13.3□□□□□ -0.28
TUBB3-204ENST00000554116 GRIK4Q16099 956 aa13.3□□□□□ -0.28
TUBB3-204ENST00000554116 XRRA1Q6P2D8 792 aa13.3□□□□□ -0.28
TUBB3-204ENST00000554116 ADGRD2Q7Z7M1 963 aa13.3□□□□□ -0.28
TUBB3-204ENST00000554116 CMTR1Q8N1G2 835 aaKnown RBP13.3□□□□□ -0.28
TUBB3-204ENST00000554116 SPPL3Q8TCT6 385 aa13.3□□□□□ -0.28
TUBB3-204ENST00000554116 MAP3K14Q99558 947 aa13.3□□□□□ -0.28
TUBB3-204ENST00000554116 CLEC1BQ9P126 229 aa13.3□□□□□ -0.28
TUBB3-204ENST00000554116 MUTYHQ9UIF7 546 aa13.3□□□□□ -0.28
TUBB3-204ENST00000554116 ZNF215Q9UL58 517 aaPredicted RBP13.3□□□□□ -0.28
TUBB3-204ENST00000554116 UBIAD1Q9Y5Z9 338 aa13.3□□□□□ -0.28
TUBB3-204ENST00000554116 CDY2AQ9Y6F7 541 aa13.3□□□□□ -0.28
TUBB3-204ENST00000554116 MRPL42Q9Y6G3 142 aaKnown RBP13.3□□□□□ -0.28
TUBB3-204ENST00000554116 FNDC1Q4ZHG4 1894 aaPredicted RBP13.29□□□□□ -0.28
TUBB3-204ENST00000554116 NCK2O43639 380 aa13.29□□□□□ -0.28
TUBB3-204ENST00000554116 EYA4O95677 639 aa13.29□□□□□ -0.28
TUBB3-204ENST00000554116 GLP2RO95838 553 aa13.29□□□□□ -0.28
TUBB3-204ENST00000554116 MMP1P03956 469 aa13.29□□□□□ -0.28
TUBB3-204ENST00000554116 ITGB1P05556 798 aa13.29□□□□□ -0.28
TUBB3-204ENST00000554116 CD52P31358 61 aa13.29□□□□□ -0.28
TUBB3-204ENST00000554116 GATMP50440 423 aa13.29□□□□□ -0.28
TUBB3-204ENST00000554116 PPFIA1Q13136 1202 aa13.29□□□□□ -0.28
TUBB3-204ENST00000554116 HERC4Q5GLZ8 1057 aaPredicted RBP13.29□□□□□ -0.28
TUBB3-204ENST00000554116 TAF2Q6P1X5 1199 aa13.29□□□□□ -0.28
TUBB3-204ENST00000554116 RNF135Q8IUD6 432 aa13.29□□□□□ -0.28
TUBB3-204ENST00000554116 ZNF654Q8IZM8 581 aa13.29□□□□□ -0.28
TUBB3-204ENST00000554116 SEPT1Q8WYJ6 367 aa13.29□□□□□ -0.28
TUBB3-204ENST00000554116 MAP4K1Q92918 833 aa13.29□□□□□ -0.28
TUBB3-204ENST00000554116 GPRASP2Q96D09 838 aa13.29□□□□□ -0.28
TUBB3-204ENST00000554116 PHOX2BQ99453 314 aa13.29□□□□□ -0.28
TUBB3-204ENST00000554116 C11orf84Q9BUA3 381 aaPredicted RBP13.29□□□□□ -0.28
TUBB3-204ENST00000554116 TMX1Q9H3N1 280 aa13.29□□□□□ -0.28
TUBB3-204ENST00000554116 TUBE1Q9UJT0 475 aa13.29□□□□□ -0.28
TUBB3-204ENST00000554116 PCDHGC5Q9Y5F6 944 aa13.29□□□□□ -0.28
TUBB3-204ENST00000554116 U3KPZ7 1027 aaPredicted RBP13.29□□□□□ -0.28
TUBB3-204ENST00000554116 DCHS1Q96JQ0 3298 aa13.29□□□□□ -0.28
TUBB3-204ENST00000554116 EVPLQ92817 2033 aa13.29□□□□□ -0.28
TUBB3-204ENST00000554116 hCG_1642624A0A1W2PR95 340 aa13.28□□□□□ -0.28
TUBB3-204ENST00000554116 SGSM2O43147 1006 aa13.28□□□□□ -0.28
TUBB3-204ENST00000554116 CSPG5O95196 566 aa13.28□□□□□ -0.28
TUBB3-204ENST00000554116 INSRRP14616 1297 aa13.28□□□□□ -0.28
TUBB3-204ENST00000554116 SMARCA1P28370 1054 aa13.28□□□□□ -0.28
TUBB3-204ENST00000554116 TRDNQ13061 729 aa13.28□□□□□ -0.28
TUBB3-204ENST00000554116 BTG3Q14201 252 aaPredicted RBP13.28□□□□□ -0.28
TUBB3-204ENST00000554116 UBE2SQ16763 222 aa13.28□□□□□ -0.28
TUBB3-204ENST00000554116 TSHZ1Q6ZSZ6 1077 aa13.28□□□□□ -0.28
TUBB3-204ENST00000554116 NCOA7Q8NI08 942 aa13.28□□□□□ -0.28
TUBB3-204ENST00000554116 SMARCC2Q8TAQ2 1214 aa13.28□□□□□ -0.28
TUBB3-204ENST00000554116 CYP2W1Q8TAV3 490 aa13.28□□□□□ -0.28
TUBB3-204ENST00000554116 TRAPPC12Q8WVT3 735 aa13.28□□□□□ -0.28
TUBB3-204ENST00000554116 P2RX5Q93086 422 aa13.28□□□□□ -0.28
TUBB3-204ENST00000554116 IGFLR1Q9H665 355 aa13.28□□□□□ -0.28
TUBB3-204ENST00000554116 ST18O60284 1047 aa13.27□□□□□ -0.29
TUBB3-204ENST00000554116 RXRAP19793 462 aa13.27□□□□□ -0.29
TUBB3-204ENST00000554116 PTPN5P54829 565 aa13.27□□□□□ -0.29
TUBB3-204ENST00000554116 MRPS6P82932 125 aaKnown RBP13.27□□□□□ -0.29
TUBB3-204ENST00000554116 SMAD4Q13485 552 aaKnown RBP13.27□□□□□ -0.29
TUBB3-204ENST00000554116 IER5LQ5T953 404 aa13.27□□□□□ -0.29
TUBB3-204ENST00000554116 CATIPQ7Z7H3 387 aa13.27□□□□□ -0.29
TUBB3-204ENST00000554116 NLRX1Q86UT6 975 aa13.27□□□□□ -0.29
TUBB3-204ENST00000554116 SKAP1Q86WV1 359 aa13.27□□□□□ -0.29
TUBB3-204ENST00000554116 PRRX2Q99811 253 aa13.27□□□□□ -0.29
TUBB3-204ENST00000554116 PLVAPQ9BX97 442 aa13.27□□□□□ -0.29
TUBB3-204ENST00000554116 ERAP1Q9NZ08 941 aa13.27□□□□□ -0.29
TUBB3-204ENST00000554116 PKD2L1Q9P0L9 805 aa13.27□□□□□ -0.29
TUBB3-204ENST00000554116 PADI3Q9ULW8 664 aa13.27□□□□□ -0.29
TUBB3-204ENST00000554116 MGEA5O60502 916 aa13.26□□□□□ -0.29
TUBB3-204ENST00000554116 IGBP1P78318 339 aa13.26□□□□□ -0.29
TUBB3-204ENST00000554116 RBM10P98175 930 aaKnown RBP13.26□□□□□ -0.29
TUBB3-204ENST00000554116 TMEM62Q0P6H9 643 aa13.26□□□□□ -0.29
TUBB3-204ENST00000554116 PKN1Q16512 942 aa13.26□□□□□ -0.29
TUBB3-204ENST00000554116 TYW1BQ6NUM6 668 aa13.26□□□□□ -0.29
TUBB3-204ENST00000554116 KMT2EQ8IZD2 1858 aa13.26□□□□□ -0.29
TUBB3-204ENST00000554116 KLHL23Q8NBE8 558 aa13.26□□□□□ -0.29
TUBB3-204ENST00000554116 GIMAP8Q8ND71 665 aaPredicted RBP13.26□□□□□ -0.29
TUBB3-204ENST00000554116 PRSS33Q8NF86 280 aa13.26□□□□□ -0.29
TUBB3-204ENST00000554116 VN1R2Q8NFZ6 395 aa13.26□□□□□ -0.29
TUBB3-204ENST00000554116 RRP36Q96EU6 259 aaKnown RBP13.26□□□□□ -0.29
TUBB3-204ENST00000554116 CCDC136Q96JN2 1154 aa13.26□□□□□ -0.29
TUBB3-204ENST00000554116 FAM49AQ9H0Q0 323 aaPredicted RBP13.26□□□□□ -0.29
TUBB3-204ENST00000554116 SMARCAD1Q9H4L7 1026 aa13.26□□□□□ -0.29
TUBB3-204ENST00000554116 PSTPIP2Q9H939 334 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms