RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 AKR1B1P15121 316 aa8.26□□□□□ -1.09
ATXN3-224ENST00000554040 IL9P15248 144 aa8.26□□□□□ -1.09
ATXN3-224ENST00000554040 TNFAIP2Q03169 654 aa8.26□□□□□ -1.09
ATXN3-224ENST00000554040 HIF1AQ16665 826 aa8.26□□□□□ -1.09
ATXN3-224ENST00000554040 NOL8Q76FK4 1167 aaKnown RBP8.26□□□□□ -1.09
ATXN3-224ENST00000554040 ARMCX2Q7L311 632 aa8.26□□□□□ -1.09
ATXN3-224ENST00000554040 DEFB128Q7Z7B8 93 aa8.26□□□□□ -1.09
ATXN3-224ENST00000554040 HERC6Q8IVU3 1022 aa8.26□□□□□ -1.09
ATXN3-224ENST00000554040 CALR3Q96L12 384 aaKnown RBP8.26□□□□□ -1.09
ATXN3-224ENST00000554040 FGD4Q96M96 766 aa8.26□□□□□ -1.09
ATXN3-224ENST00000554040 RIOK1Q9BRS2 568 aaKnown RBP8.26□□□□□ -1.09
ATXN3-224ENST00000554040 API5Q9BZZ5 524 aaKnown RBP8.26□□□□□ -1.09
ATXN3-224ENST00000554040 KATNBL1Q9H079 304 aa8.26□□□□□ -1.09
ATXN3-224ENST00000554040 SMC4Q9NTJ3 1288 aa8.26□□□□□ -1.09
ATXN3-224ENST00000554040 SWAP70Q9UH65 585 aa8.26□□□□□ -1.09
ATXN3-224ENST00000554040 GNEQ9Y223 722 aaKnown RBP8.26□□□□□ -1.09
ATXN3-224ENST00000554040 RIPK3Q9Y572 518 aa8.26□□□□□ -1.09
ATXN3-224ENST00000554040 ZFHX2Q9C0A1 2572 aaPredicted RBP8.26□□□□□ -1.09
ATXN3-224ENST00000554040 RIF1Q5UIP0 2472 aaKnown RBP8.26□□□□□ -1.09
ATXN3-224ENST00000554040 ZNF318Q5VUA4 2279 aa8.26□□□□□ -1.09
ATXN3-224ENST00000554040 PNMA6EA0A0J9YXQ4 647 aa8.25□□□□□ -1.09
ATXN3-224ENST00000554040 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.25□□□□□ -1.09
ATXN3-224ENST00000554040 E9PSI1 815 aa8.25□□□□□ -1.09
ATXN3-224ENST00000554040 ATP2A1O14983 1001 aa8.25□□□□□ -1.09
ATXN3-224ENST00000554040 DYNC1LI2O43237 492 aaPredicted RBP8.25□□□□□ -1.09
ATXN3-224ENST00000554040 SUPT20HL2P0C7V6 817 aa8.25□□□□□ -1.09
ATXN3-224ENST00000554040 SELPP16109 830 aa8.25□□□□□ -1.09
ATXN3-224ENST00000554040 NFKB1P19838 968 aa8.25□□□□□ -1.09
ATXN3-224ENST00000554040 KCNA5P22460 613 aa8.25□□□□□ -1.09
ATXN3-224ENST00000554040 WEE1P30291 646 aa8.25□□□□□ -1.09
ATXN3-224ENST00000554040 RFC2P35250 354 aa8.25□□□□□ -1.09
ATXN3-224ENST00000554040 TBC1D8BQ0IIM8 1120 aa8.25□□□□□ -1.09
ATXN3-224ENST00000554040 FSCN1Q16658 493 aaKnown RBP8.25□□□□□ -1.09
ATXN3-224ENST00000554040 FAM83BQ5T0W9 1011 aa8.25□□□□□ -1.09
ATXN3-224ENST00000554040 SNRNP48Q6IEG0 339 aaKnown RBP8.25□□□□□ -1.09
ATXN3-224ENST00000554040 SPRED2Q7Z698 418 aa8.25□□□□□ -1.09
ATXN3-224ENST00000554040 CLEC10AQ8IUN9 316 aa8.25□□□□□ -1.09
ATXN3-224ENST00000554040 CCDC144CPQ8IYA2 1237 aa8.25□□□□□ -1.09
ATXN3-224ENST00000554040 CCDC17Q96LX7 622 aa8.25□□□□□ -1.09
ATXN3-224ENST00000554040 MFSD14AQ96MC6 490 aa8.25□□□□□ -1.09
ATXN3-224ENST00000554040 AP5M1Q9H0R1 490 aa8.25□□□□□ -1.09
ATXN3-224ENST00000554040 ALDH8A1Q9H2A2 487 aaPredicted RBP8.25□□□□□ -1.09
ATXN3-224ENST00000554040 KLK14Q9P0G3 267 aa8.25□□□□□ -1.09
ATXN3-224ENST00000554040 LRRC37A2A6NM11 1700 aa8.25□□□□□ -1.09
ATXN3-224ENST00000554040 DMDP11532 3685 aa8.25□□□□□ -1.09
ATXN3-224ENST00000554040 SPTBN4Q9H254 2564 aa8.24□□□□□ -1.09
ATXN3-224ENST00000554040 A0A0A0MRY4 1105 aa8.24□□□□□ -1.09
ATXN3-224ENST00000554040 CYP2D6P10635 497 aa8.24□□□□□ -1.09
ATXN3-224ENST00000554040 CYP2C9P11712 490 aa8.24□□□□□ -1.09
ATXN3-224ENST00000554040 EEF2P13639 858 aaKnown RBP8.24□□□□□ -1.09
ATXN3-224ENST00000554040 AFF1P51825 1210 aaKnown RBP8.24□□□□□ -1.09
ATXN3-224ENST00000554040 PSMC6P62333 389 aa8.24□□□□□ -1.09
ATXN3-224ENST00000554040 CCINQ13939 588 aa8.24□□□□□ -1.09
ATXN3-224ENST00000554040 HFE2Q6ZVN8 426 aa8.24□□□□□ -1.09
ATXN3-224ENST00000554040 TLK2Q86UE8 772 aa8.24□□□□□ -1.09
ATXN3-224ENST00000554040 ANKRD35Q8N283 1001 aa8.24□□□□□ -1.09
ATXN3-224ENST00000554040 GDPD5Q8WTR4 605 aa8.24□□□□□ -1.09
ATXN3-224ENST00000554040 NUDT8Q8WV74 236 aa8.24□□□□□ -1.09
ATXN3-224ENST00000554040 ANKS1AQ92625 1134 aa8.24□□□□□ -1.09
ATXN3-224ENST00000554040 DYNLL2Q96FJ2 89 aa8.24□□□□□ -1.09
ATXN3-224ENST00000554040 SLF1Q9BQI6 1058 aa8.24□□□□□ -1.09
ATXN3-224ENST00000554040 CRNKL1Q9BZJ0 848 aaKnown RBP8.24□□□□□ -1.09
ATXN3-224ENST00000554040 IGFLR1Q9H665 355 aa8.24□□□□□ -1.09
ATXN3-224ENST00000554040 ANTXR1Q9H6X2 564 aa8.24□□□□□ -1.09
ATXN3-224ENST00000554040 KANSL2Q9H9L4 492 aa8.24□□□□□ -1.09
ATXN3-224ENST00000554040 SUGCTQ9HAC7 445 aa8.24□□□□□ -1.09
ATXN3-224ENST00000554040 DCP1AQ9NPI6 582 aaPredicted RBP8.24□□□□□ -1.09
ATXN3-224ENST00000554040 TRMT13Q9NUP7 481 aaKnown RBP8.24□□□□□ -1.09
ATXN3-224ENST00000554040 ZFATQ9P243 1243 aa8.24□□□□□ -1.09
ATXN3-224ENST00000554040 Q9Y3F1 56 aa8.24□□□□□ -1.09
ATXN3-224ENST00000554040 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.24□□□□□ -1.09
ATXN3-224ENST00000554040 ZNF536O15090 1300 aa8.24□□□□□ -1.09
ATXN3-224ENST00000554040 A0A0G2JMZ2 1700 aa8.23□□□□□ -1.09
ATXN3-224ENST00000554040 DYRK3O43781 588 aa8.23□□□□□ -1.09
ATXN3-224ENST00000554040 ZBED4O75132 1171 aa8.23□□□□□ -1.09
ATXN3-224ENST00000554040 GNAI2P04899 355 aa8.23□□□□□ -1.09
ATXN3-224ENST00000554040 IQCF3P0C7M6 154 aa8.23□□□□□ -1.09
ATXN3-224ENST00000554040 ERVK-21P61565 698 aa8.23□□□□□ -1.09
ATXN3-224ENST00000554040 SLFN5Q08AF3 891 aa8.23□□□□□ -1.09
ATXN3-224ENST00000554040 IQSEC1Q6DN90 963 aa8.23□□□□□ -1.09
ATXN3-224ENST00000554040 PSAPL1Q6NUJ1 521 aa8.23□□□□□ -1.09
ATXN3-224ENST00000554040 CPXCR1Q8N123 301 aa8.23□□□□□ -1.09
ATXN3-224ENST00000554040 PRPF38AQ8NAV1 312 aaKnown RBP8.23□□□□□ -1.09
ATXN3-224ENST00000554040 CHST13Q8NET6 341 aa8.23□□□□□ -1.09
ATXN3-224ENST00000554040 NEK9Q8TD19 979 aa8.23□□□□□ -1.09
ATXN3-224ENST00000554040 FTOQ9C0B1 505 aaKnown RBP eCLIP8.23□□□□□ -1.09
ATXN3-224ENST00000554040 VRTNQ9H8Y1 702 aa8.23□□□□□ -1.09
ATXN3-224ENST00000554040 JPH1Q9HDC5 661 aaPredicted RBP8.23□□□□□ -1.09
ATXN3-224ENST00000554040 FBXO40Q9UH90 709 aa8.23□□□□□ -1.09
ATXN3-224ENST00000554040 DBNLQ9UJU6 430 aaKnown RBP8.23□□□□□ -1.09
ATXN3-224ENST00000554040 MYO15AQ9UKN7 3530 aa8.23□□□□□ -1.09
ATXN3-224ENST00000554040 TNKSO95271 1327 aa8.23□□□□□ -1.09
ATXN3-224ENST00000554040 TRIOO75962 3097 aa8.23□□□□□ -1.09
ATXN3-224ENST00000554040 FOCADQ5VW36 1801 aa8.22□□□□□ -1.09
ATXN3-224ENST00000554040 GBF1Q92538 1859 aa8.22□□□□□ -1.09
ATXN3-224ENST00000554040 CDK5RAP2Q96SN8 1893 aa8.22□□□□□ -1.09
ATXN3-224ENST00000554040 LCHNA4D1U4 455 aa8.22□□□□□ -1.09
ATXN3-224ENST00000554040 ASB14A6NK59 587 aa8.22□□□□□ -1.09
ATXN3-224ENST00000554040 ZBTB42B2RXF5 422 aa8.22□□□□□ -1.09
ATXN3-224ENST00000554040 BAIAP3O94812 1187 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms