RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 SP2Q02086 613 aa11.69□□□□□ -0.54
TMEM55B-205ENST00000554028 SP4Q02446 784 aa11.69□□□□□ -0.54
TMEM55B-205ENST00000554028 CTTNQ14247 550 aaKnown RBP11.69□□□□□ -0.54
TMEM55B-205ENST00000554028 CELF3Q5SZQ8 465 aaKnown RBP11.69□□□□□ -0.54
TMEM55B-205ENST00000554028 FAM160B1Q5W0V3 765 aa11.69□□□□□ -0.54
TMEM55B-205ENST00000554028 PDXDC2PQ6P474 469 aa11.69□□□□□ -0.54
TMEM55B-205ENST00000554028 POTEBQ6S5H4 581 aa11.69□□□□□ -0.54
TMEM55B-205ENST00000554028 METTL7BQ6UX53 244 aa11.69□□□□□ -0.54
TMEM55B-205ENST00000554028 OTUD6AQ7L8S5 288 aa11.69□□□□□ -0.54
TMEM55B-205ENST00000554028 SEPT1Q8WYJ6 367 aa11.69□□□□□ -0.54
TMEM55B-205ENST00000554028 RAD54LQ92698 747 aa11.69□□□□□ -0.54
TMEM55B-205ENST00000554028 SMARCE1Q969G3 411 aa11.69□□□□□ -0.54
TMEM55B-205ENST00000554028 AZI2Q9H6S1 392 aa11.69□□□□□ -0.54
TMEM55B-205ENST00000554028 RMND1Q9NWS8 449 aa11.69□□□□□ -0.54
TMEM55B-205ENST00000554028 RGL1Q9NZL6 768 aa11.69□□□□□ -0.54
TMEM55B-205ENST00000554028 NRBP1Q9UHY1 535 aa11.69□□□□□ -0.54
TMEM55B-205ENST00000554028 POTEFA5A3E0 1075 aa11.68□□□□□ -0.54
TMEM55B-205ENST00000554028 SORBS3O60504 671 aa11.68□□□□□ -0.54
TMEM55B-205ENST00000554028 FARP2O94887 1054 aaPredicted RBP11.68□□□□□ -0.54
TMEM55B-205ENST00000554028 KRT18P05783 430 aaKnown RBP11.68□□□□□ -0.54
TMEM55B-205ENST00000554028 PLA2G4BP0C869 781 aa11.68□□□□□ -0.54
TMEM55B-205ENST00000554028 SPATA31C1P0DKV0 1188 aa11.68□□□□□ -0.54
TMEM55B-205ENST00000554028 PRMT2P55345 433 aa11.68□□□□□ -0.54
TMEM55B-205ENST00000554028 DHX8Q14562 1220 aaKnown RBP11.68□□□□□ -0.54
TMEM55B-205ENST00000554028 SWSAP1Q6NVH7 229 aa11.68□□□□□ -0.54
TMEM55B-205ENST00000554028 TAPT1Q6NXT6 567 aa11.68□□□□□ -0.54
TMEM55B-205ENST00000554028 CCDC62Q6P9F0 684 aa11.68□□□□□ -0.54
TMEM55B-205ENST00000554028 LRSAM1Q6UWE0 723 aa11.68□□□□□ -0.54
TMEM55B-205ENST00000554028 RBM43Q6ZSC3 357 aaKnown RBP11.68□□□□□ -0.54
TMEM55B-205ENST00000554028 CD99L2Q8TCZ2 262 aa11.68□□□□□ -0.54
TMEM55B-205ENST00000554028 SPATA33Q96N06 139 aa11.68□□□□□ -0.54
TMEM55B-205ENST00000554028 GSDMAQ96QA5 445 aa11.68□□□□□ -0.54
TMEM55B-205ENST00000554028 LXNQ9BS40 222 aa11.68□□□□□ -0.54
TMEM55B-205ENST00000554028 GTPBP4Q9BZE4 634 aaKnown RBP11.68□□□□□ -0.54
TMEM55B-205ENST00000554028 PDGFCQ9NRA1 345 aa11.68□□□□□ -0.54
TMEM55B-205ENST00000554028 KBTBD4Q9NVX7 518 aa11.68□□□□□ -0.54
TMEM55B-205ENST00000554028 ANO10Q9NW15 660 aa11.68□□□□□ -0.54
TMEM55B-205ENST00000554028 FAM184BQ9ULE4 1060 aa11.68□□□□□ -0.54
TMEM55B-205ENST00000554028 ARHGEF35A5YM69 484 aa11.67□□□□□ -0.54
TMEM55B-205ENST00000554028 E9PMD0 336 aa11.67□□□□□ -0.54
TMEM55B-205ENST00000554028 LYPLA2O95372 231 aa11.67□□□□□ -0.54
TMEM55B-205ENST00000554028 EYA4O95677 639 aa11.67□□□□□ -0.54
TMEM55B-205ENST00000554028 CCNE2O96020 404 aa11.67□□□□□ -0.54
TMEM55B-205ENST00000554028 SUPT20HL2P0C7V6 817 aa11.67□□□□□ -0.54
TMEM55B-205ENST00000554028 CYP2C19P33261 490 aa11.67□□□□□ -0.54
TMEM55B-205ENST00000554028 ADCYAP1R1P41586 468 aa11.67□□□□□ -0.54
TMEM55B-205ENST00000554028 MDM2Q00987 491 aaPredicted RBP11.67□□□□□ -0.54
TMEM55B-205ENST00000554028 TNFAIP2Q03169 654 aa11.67□□□□□ -0.54
TMEM55B-205ENST00000554028 PRKCZQ05513 592 aa11.67□□□□□ -0.54
TMEM55B-205ENST00000554028 PNOCQ13519 176 aa11.67□□□□□ -0.54
TMEM55B-205ENST00000554028 MCM6Q14566 821 aa11.67□□□□□ -0.54
TMEM55B-205ENST00000554028 ECM1Q16610 540 aa11.67□□□□□ -0.54
TMEM55B-205ENST00000554028 CCDC144BQ3MJ40 725 aa11.67□□□□□ -0.54
TMEM55B-205ENST00000554028 NAALADL2Q58DX5 795 aa11.67□□□□□ -0.54
TMEM55B-205ENST00000554028 BRDTQ58F21 947 aaPredicted RBP11.67□□□□□ -0.54
TMEM55B-205ENST00000554028 ABHD15Q6UXT9 468 aa11.67□□□□□ -0.54
TMEM55B-205ENST00000554028 SH3RF1Q7Z6J0 888 aa11.67□□□□□ -0.54
TMEM55B-205ENST00000554028 C4orf19Q8IY42 314 aa11.67□□□□□ -0.54
TMEM55B-205ENST00000554028 TRIML1Q8N9V2 468 aa11.67□□□□□ -0.54
TMEM55B-205ENST00000554028 BANK1Q8NDB2 785 aa11.67□□□□□ -0.54
TMEM55B-205ENST00000554028 RAET1EQ8TD07 263 aa11.67□□□□□ -0.54
TMEM55B-205ENST00000554028 STAMQ92783 540 aa11.67□□□□□ -0.54
TMEM55B-205ENST00000554028 ARHGAP39Q9C0H5 1083 aa11.67□□□□□ -0.54
TMEM55B-205ENST00000554028 TSPY26PQ9H489 355 aa11.67□□□□□ -0.54
TMEM55B-205ENST00000554028 ZNF302Q9NR11 478 aa11.67□□□□□ -0.54
TMEM55B-205ENST00000554028 NRBP2Q9NSY0 501 aa11.67□□□□□ -0.54
TMEM55B-205ENST00000554028 GABBR1Q9UBS5 961 aa11.67□□□□□ -0.54
TMEM55B-205ENST00000554028 SRRDQ9UH36 339 aa11.67□□□□□ -0.54
TMEM55B-205ENST00000554028 PCDHA5Q9Y5H7 936 aa11.67□□□□□ -0.54
TMEM55B-205ENST00000554028 ATG7O95352 703 aa11.66□□□□□ -0.54
TMEM55B-205ENST00000554028 ARIH2O95376 493 aa11.66□□□□□ -0.54
TMEM55B-205ENST00000554028 CAVIN2O95810 425 aa11.66□□□□□ -0.54
TMEM55B-205ENST00000554028 CTGFP29279 349 aa11.66□□□□□ -0.54
TMEM55B-205ENST00000554028 TCF7P36402 384 aaPredicted RBP11.66□□□□□ -0.54
TMEM55B-205ENST00000554028 ASIC1P78348 528 aa11.66□□□□□ -0.54
TMEM55B-205ENST00000554028 STX1AQ16623 288 aa11.66□□□□□ -0.54
TMEM55B-205ENST00000554028 CCL14Q16627 93 aa11.66□□□□□ -0.54
TMEM55B-205ENST00000554028 DUSP28Q4G0W2 176 aa11.66□□□□□ -0.54
TMEM55B-205ENST00000554028 GRAMD1CQ8IYS0 662 aa11.66□□□□□ -0.54
TMEM55B-205ENST00000554028 SYT2Q8N9I0 419 aaPredicted RBP11.66□□□□□ -0.54
TMEM55B-205ENST00000554028 OR6J1Q8NGC5 347 aa11.66□□□□□ -0.54
TMEM55B-205ENST00000554028 ZNF296Q8WUU4 475 aaPredicted RBP11.66□□□□□ -0.54
TMEM55B-205ENST00000554028 GLG1Q92896 1179 aa11.66□□□□□ -0.54
TMEM55B-205ENST00000554028 C7orf25Q9BPX7 421 aa11.66□□□□□ -0.54
TMEM55B-205ENST00000554028 NAT10Q9H0A0 1025 aaKnown RBP11.66□□□□□ -0.54
TMEM55B-205ENST00000554028 AP5M1Q9H0R1 490 aa11.66□□□□□ -0.54
TMEM55B-205ENST00000554028 BLZF1Q9H2G9 400 aa11.66□□□□□ -0.54
TMEM55B-205ENST00000554028 BHMT2Q9H2M3 363 aa11.66□□□□□ -0.54
TMEM55B-205ENST00000554028 ANKEF1Q9NU02 776 aa11.66□□□□□ -0.54
TMEM55B-205ENST00000554028 BLOC1S4Q9NUP1 217 aa11.66□□□□□ -0.54
TMEM55B-205ENST00000554028 FLRT1Q9NZU1 646 aa11.66□□□□□ -0.54
TMEM55B-205ENST00000554028 KCND2Q9NZV8 630 aa11.66□□□□□ -0.54
TMEM55B-205ENST00000554028 DACH1Q9UI36 760 aa11.66□□□□□ -0.54
TMEM55B-205ENST00000554028 TUBE1Q9UJT0 475 aa11.66□□□□□ -0.54
TMEM55B-205ENST00000554028 DBR1Q9UK59 544 aaKnown RBP11.66□□□□□ -0.54
TMEM55B-205ENST00000554028 GABRQQ9UN88 632 aa11.66□□□□□ -0.54
TMEM55B-205ENST00000554028 PLXNB2O15031 1838 aa11.65□□□□□ -0.54
TMEM55B-205ENST00000554028 ZNF236Q9UL36 1845 aa11.65□□□□□ -0.54
TMEM55B-205ENST00000554028 GSTTP1A0A1W2PQM5 241 aa11.65□□□□□ -0.54
TMEM55B-205ENST00000554028 FOXN1O15353 648 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms