RNA–Protein interactions for RNA: ENST00000553871.5

EFCAB11-204, Transcript of EF-hand calcium binding domain 11, human

TSL 5

Gene EFCAB11, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EFCAB11-204	ENST00000553871	NGRN	Q9NPE2	291 aa	Known RBP	4.92	□□□□□ -1.62
EFCAB11-204	ENST00000553871	DCP1A	Q9NPI6	582 aa	Predicted RBP	4.92	□□□□□ -1.62
EFCAB11-204	ENST00000553871	FAM53C	Q9NYF3	392 aa		4.92	□□□□□ -1.62
EFCAB11-204	ENST00000553871	ARHGAP28	Q9P2N2	729 aa		4.92	□□□□□ -1.62
EFCAB11-204	ENST00000553871	FAN1	Q9Y2M0	1017 aa		4.92	□□□□□ -1.62
EFCAB11-204	ENST00000553871	C4BPA	P04003	597 aa	Known RBP	4.91	□□□□□ -1.62
EFCAB11-204	ENST00000553871	MME	P08473	750 aa		4.91	□□□□□ -1.62
EFCAB11-204	ENST00000553871	FAH	P16930	419 aa		4.91	□□□□□ -1.62
EFCAB11-204	ENST00000553871	YBX3	P16989	372 aa	Known RBP eCLIP	4.91	□□□□□ -1.62
EFCAB11-204	ENST00000553871	CD40	P25942	277 aa		4.91	□□□□□ -1.62
EFCAB11-204	ENST00000553871	STAT5A	P42229	794 aa		4.91	□□□□□ -1.62
EFCAB11-204	ENST00000553871	FNTB	P49356	437 aa		4.91	□□□□□ -1.62
EFCAB11-204	ENST00000553871	NKX3-2	P78367	333 aa		4.91	□□□□□ -1.62
EFCAB11-204	ENST00000553871	SEC23A	Q15436	765 aa		4.91	□□□□□ -1.62
EFCAB11-204	ENST00000553871	TARBP2	Q15633	366 aa	Known RBP	4.91	□□□□□ -1.62
EFCAB11-204	ENST00000553871	ODR4	Q5SWX8	454 aa		4.91	□□□□□ -1.62
EFCAB11-204	ENST00000553871	BROX	Q5VW32	411 aa		4.91	□□□□□ -1.62
EFCAB11-204	ENST00000553871	NME9	Q86XW9	330 aa		4.91	□□□□□ -1.62
EFCAB11-204	ENST00000553871	MIB1	Q86YT6	1006 aa		4.91	□□□□□ -1.62
EFCAB11-204	ENST00000553871		Q8N3U1	123 aa		4.91	□□□□□ -1.62
EFCAB11-204	ENST00000553871	CNTD1	Q8N815	330 aa		4.91	□□□□□ -1.62
EFCAB11-204	ENST00000553871	E2F7	Q96AV8	911 aa		4.91	□□□□□ -1.62
EFCAB11-204	ENST00000553871	ZNF552	Q9H707	407 aa	Predicted RBP	4.91	□□□□□ -1.62
EFCAB11-204	ENST00000553871	METTL14	Q9HCE5	456 aa	Known RBP	4.91	□□□□□ -1.62
EFCAB11-204	ENST00000553871	NOC2L	Q9Y3T9	749 aa	Known RBP	4.91	□□□□□ -1.62
EFCAB11-204	ENST00000553871	WASHC2A	Q641Q2	1341 aa		4.91	□□□□□ -1.62
EFCAB11-204	ENST00000553871	PHLDB1	Q86UU1	1377 aa		4.91	□□□□□ -1.62
EFCAB11-204	ENST00000553871	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	4.9	□□□□□ -1.63
EFCAB11-204	ENST00000553871	DVL2	O14641	736 aa		4.9	□□□□□ -1.63
EFCAB11-204	ENST00000553871	TGM5	O43548	720 aa		4.9	□□□□□ -1.63
EFCAB11-204	ENST00000553871	KDM1A	O60341	852 aa		4.9	□□□□□ -1.63
EFCAB11-204	ENST00000553871	PRKD3	O94806	890 aa		4.9	□□□□□ -1.63
EFCAB11-204	ENST00000553871	ASGR2	P07307	311 aa		4.9	□□□□□ -1.63
EFCAB11-204	ENST00000553871	NCAM1	P13591	858 aa		4.9	□□□□□ -1.63
EFCAB11-204	ENST00000553871	PFKL	P17858	780 aa		4.9	□□□□□ -1.63
EFCAB11-204	ENST00000553871	PTX3	P26022	381 aa	Predicted RBP	4.9	□□□□□ -1.63
EFCAB11-204	ENST00000553871	HERVK_113	P62684	666 aa		4.9	□□□□□ -1.63
EFCAB11-204	ENST00000553871	MTMR1	Q13613	665 aa		4.9	□□□□□ -1.63
EFCAB11-204	ENST00000553871	TERF2	Q15554	542 aa		4.9	□□□□□ -1.63
EFCAB11-204	ENST00000553871	MLANA	Q16655	118 aa		4.9	□□□□□ -1.63
EFCAB11-204	ENST00000553871	CATSPERE	Q5SY80	951 aa		4.9	□□□□□ -1.63
EFCAB11-204	ENST00000553871	VASN	Q6EMK4	673 aa		4.9	□□□□□ -1.63
EFCAB11-204	ENST00000553871	TEPP	Q6URK8	271 aa		4.9	□□□□□ -1.63
EFCAB11-204	ENST00000553871	CD300LD	Q6UXZ3	194 aa		4.9	□□□□□ -1.63
EFCAB11-204	ENST00000553871	C7orf31	Q8N865	590 aa		4.9	□□□□□ -1.63
EFCAB11-204	ENST00000553871	CLRN3	Q8NCR9	226 aa		4.9	□□□□□ -1.63
EFCAB11-204	ENST00000553871	WDR48	Q8TAF3	677 aa		4.9	□□□□□ -1.63
EFCAB11-204	ENST00000553871	STAG1	Q8WVM7	1258 aa		4.9	□□□□□ -1.63
EFCAB11-204	ENST00000553871	AHCYL2	Q96HN2	611 aa	Known RBP	4.9	□□□□□ -1.63
EFCAB11-204	ENST00000553871	GBP4	Q96PP9	640 aa		4.9	□□□□□ -1.63
EFCAB11-204	ENST00000553871	RNF38	Q9H0F5	515 aa		4.9	□□□□□ -1.63
EFCAB11-204	ENST00000553871	IRF2BPL	Q9H1B7	796 aa		4.9	□□□□□ -1.63
EFCAB11-204	ENST00000553871	TRHDE	Q9UKU6	1024 aa		4.9	□□□□□ -1.63
EFCAB11-204	ENST00000553871	UBA6	A0AVT1	1052 aa	Predicted RBP	4.89	□□□□□ -1.63
EFCAB11-204	ENST00000553871	ZNF503-AS2	A6NEH8	195 aa		4.89	□□□□□ -1.63
EFCAB11-204	ENST00000553871	LRRC10B	A6NIK2	292 aa		4.89	□□□□□ -1.63
EFCAB11-204	ENST00000553871	ACOT7	O00154	380 aa		4.89	□□□□□ -1.63
EFCAB11-204	ENST00000553871	CYP2C8	P10632	490 aa		4.89	□□□□□ -1.63
EFCAB11-204	ENST00000553871	SDHA	P31040	664 aa		4.89	□□□□□ -1.63
EFCAB11-204	ENST00000553871	PHC1	P78364	1004 aa		4.89	□□□□□ -1.63
EFCAB11-204	ENST00000553871	SMAD3	P84022	425 aa	Known RBP	4.89	□□□□□ -1.63
EFCAB11-204	ENST00000553871	ADCY1	Q08828	1119 aa		4.89	□□□□□ -1.63
EFCAB11-204	ENST00000553871	EPHA7	Q15375	998 aa		4.89	□□□□□ -1.63
EFCAB11-204	ENST00000553871	SMAD2	Q15796	467 aa	Known RBP	4.89	□□□□□ -1.63
EFCAB11-204	ENST00000553871	GPR158	Q5T848	1215 aa		4.89	□□□□□ -1.63
EFCAB11-204	ENST00000553871	PRR23B	Q6ZRT6	265 aa		4.89	□□□□□ -1.63
EFCAB11-204	ENST00000553871	ZNF610	Q8N9Z0	462 aa		4.89	□□□□□ -1.63
EFCAB11-204	ENST00000553871	ASB15	Q8WXK1	588 aa		4.89	□□□□□ -1.63
EFCAB11-204	ENST00000553871	KLHL42	Q9P2K6	505 aa		4.89	□□□□□ -1.63
EFCAB11-204	ENST00000553871	WASHC2C	Q9Y4E1	1318 aa		4.89	□□□□□ -1.63
EFCAB11-204	ENST00000553871	PRAMEF22	A3QJZ6	481 aa		4.88	□□□□□ -1.63
EFCAB11-204	ENST00000553871	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	4.88	□□□□□ -1.63
EFCAB11-204	ENST00000553871	PEX10	O60683	326 aa		4.88	□□□□□ -1.63
EFCAB11-204	ENST00000553871	APOL3	O95236	402 aa		4.88	□□□□□ -1.63
EFCAB11-204	ENST00000553871	LRG1	P02750	347 aa		4.88	□□□□□ -1.63
EFCAB11-204	ENST00000553871	TMEM253	P0C7T8	217 aa		4.88	□□□□□ -1.63
EFCAB11-204	ENST00000553871	AOAH	P28039	575 aa		4.88	□□□□□ -1.63
EFCAB11-204	ENST00000553871	NCKAP1L	P55160	1127 aa		4.88	□□□□□ -1.63
EFCAB11-204	ENST00000553871	CACNB2	Q08289	660 aa	Predicted RBP	4.88	□□□□□ -1.63
EFCAB11-204	ENST00000553871	DBP	Q10586	325 aa	Predicted RBP	4.88	□□□□□ -1.63
EFCAB11-204	ENST00000553871	LRRC32	Q14392	662 aa		4.88	□□□□□ -1.63
EFCAB11-204	ENST00000553871	SYDE2	Q5VT97	1194 aa		4.88	□□□□□ -1.63
EFCAB11-204	ENST00000553871	PRAMEF18	Q5VWM3	479 aa		4.88	□□□□□ -1.63
EFCAB11-204	ENST00000553871	PRAMEF9	Q5VWM5	478 aa		4.88	□□□□□ -1.63
EFCAB11-204	ENST00000553871	CD276	Q5ZPR3	534 aa		4.88	□□□□□ -1.63
EFCAB11-204	ENST00000553871	TIGD7	Q6NT04	549 aa	Predicted RBP	4.88	□□□□□ -1.63
EFCAB11-204	ENST00000553871	ESRP1	Q6NXG1	681 aa	Known RBP	4.88	□□□□□ -1.63
EFCAB11-204	ENST00000553871	TMC5	Q6UXY8	1006 aa		4.88	□□□□□ -1.63
EFCAB11-204	ENST00000553871	FRMD7	Q6ZUT3	714 aa		4.88	□□□□□ -1.63
EFCAB11-204	ENST00000553871	RASSF3	Q86WH2	238 aa		4.88	□□□□□ -1.63
EFCAB11-204	ENST00000553871	CPA5	Q8WXQ8	436 aa		4.88	□□□□□ -1.63
EFCAB11-204	ENST00000553871	JDP2	Q8WYK2	163 aa		4.88	□□□□□ -1.63
EFCAB11-204	ENST00000553871	RTF1	Q92541	710 aa	Known RBP	4.88	□□□□□ -1.63
EFCAB11-204	ENST00000553871	FERMT2	Q96AC1	680 aa		4.88	□□□□□ -1.63
EFCAB11-204	ENST00000553871	MENT	Q9BUN1	341 aa		4.88	□□□□□ -1.63
EFCAB11-204	ENST00000553871	ASPSCR1	Q9BZE9	553 aa		4.88	□□□□□ -1.63
EFCAB11-204	ENST00000553871	PDGFD	Q9GZP0	370 aa	Predicted RBP	4.88	□□□□□ -1.63
EFCAB11-204	ENST00000553871	CCDC8	Q9H0W5	538 aa	Predicted RBP	4.88	□□□□□ -1.63
EFCAB11-204	ENST00000553871	ZMAT4	Q9H898	229 aa		4.88	□□□□□ -1.63
EFCAB11-204	ENST00000553871	USP36	Q9P275	1121 aa	Known RBP	4.88	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms