RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 GPR153Q6NV75 609 aa23.08■■□□□ 1.29
FOXA1-203ENST00000553751 PIK3AP1Q6ZUJ8 805 aa23.08■■□□□ 1.29
FOXA1-203ENST00000553751 DEFB128Q7Z7B8 93 aa23.08■■□□□ 1.29
FOXA1-203ENST00000553751 CCDC60Q8IWA6 550 aaPredicted RBP23.08■■□□□ 1.29
FOXA1-203ENST00000553751 HERVK_113Q902F9 699 aa23.08■■□□□ 1.29
FOXA1-203ENST00000553751 SLC5A5Q92911 643 aa23.08■■□□□ 1.29
FOXA1-203ENST00000553751 FAM205CA6NFA0 338 aa23.07■■□□□ 1.28
FOXA1-203ENST00000553751 ST18O60284 1047 aa23.07■■□□□ 1.28
FOXA1-203ENST00000553751 FOSBP53539 338 aa23.07■■□□□ 1.28
FOXA1-203ENST00000553751 KRT76Q01546 638 aa23.07■■□□□ 1.28
FOXA1-203ENST00000553751 GPNMBQ14956 572 aa23.07■■□□□ 1.28
FOXA1-203ENST00000553751 PLCB4Q15147 1175 aa23.07■■□□□ 1.28
FOXA1-203ENST00000553751 GRIK4Q16099 956 aa23.07■■□□□ 1.28
FOXA1-203ENST00000553751 ZNF618Q5T7W0 954 aa23.07■■□□□ 1.28
FOXA1-203ENST00000553751 KRT40Q6A162 431 aa23.07■■□□□ 1.28
FOXA1-203ENST00000553751 OTOP2Q7RTS6 562 aa23.07■■□□□ 1.28
FOXA1-203ENST00000553751 NEK8Q86SG6 692 aa23.07■■□□□ 1.28
FOXA1-203ENST00000553751 SMAP1Q8IYB5 467 aaPredicted RBP23.07■■□□□ 1.28
FOXA1-203ENST00000553751 IL27Q8NEV9 243 aa23.07■■□□□ 1.28
FOXA1-203ENST00000553751 RIT2Q99578 217 aa23.07■■□□□ 1.28
FOXA1-203ENST00000553751 BRMS1Q9HCU9 246 aa23.07■■□□□ 1.28
FOXA1-203ENST00000553751 CXXC1Q9P0U4 656 aaPredicted RBP23.07■■□□□ 1.28
FOXA1-203ENST00000553751 CD2BP2O95400 341 aaKnown RBP23.06■■□□□ 1.28
FOXA1-203ENST00000553751 SMAD3P84022 425 aaKnown RBP23.06■■□□□ 1.28
FOXA1-203ENST00000553751 LETM2Q2VYF4 491 aa23.06■■□□□ 1.28
FOXA1-203ENST00000553751 MARCH8Q5T0T0 291 aa23.06■■□□□ 1.28
FOXA1-203ENST00000553751 MIS18BP1Q6P0N0 1132 aa23.06■■□□□ 1.28
FOXA1-203ENST00000553751 ETNPPLQ8TBG4 499 aa23.06■■□□□ 1.28
FOXA1-203ENST00000553751 GJA10Q969M2 543 aa23.06■■□□□ 1.28
FOXA1-203ENST00000553751 BACH2Q9BYV9 841 aa23.06■■□□□ 1.28
FOXA1-203ENST00000553751 DDX25Q9UHL0 483 aaKnown RBP23.06■■□□□ 1.28
FOXA1-203ENST00000553751 TET1Q8NFU7 2136 aa23.05■■□□□ 1.28
FOXA1-203ENST00000553751 MBLAC1A4D2B0 266 aaPredicted RBP23.05■■□□□ 1.28
FOXA1-203ENST00000553751 BACH1O14867 736 aa23.05■■□□□ 1.28
FOXA1-203ENST00000553751 SLC37A4O43826 429 aa23.05■■□□□ 1.28
FOXA1-203ENST00000553751 THPOP40225 353 aa23.05■■□□□ 1.28
FOXA1-203ENST00000553751 SLC26A2P50443 739 aa23.05■■□□□ 1.28
FOXA1-203ENST00000553751 TRIM29Q14134 588 aa23.05■■□□□ 1.28
FOXA1-203ENST00000553751 MBTPS1Q14703 1052 aa23.05■■□□□ 1.28
FOXA1-203ENST00000553751 LRCH2Q5VUJ6 765 aa23.05■■□□□ 1.28
FOXA1-203ENST00000553751 FAM160B1Q5W0V3 765 aa23.05■■□□□ 1.28
FOXA1-203ENST00000553751 FAM109BQ6ICB4 259 aaPredicted RBP23.05■■□□□ 1.28
FOXA1-203ENST00000553751 DIS3L2Q8IYB7 885 aaKnown RBP23.05■■□□□ 1.28
FOXA1-203ENST00000553751 ZNF302Q9NR11 478 aa23.05■■□□□ 1.28
FOXA1-203ENST00000553751 TCEAL9Q9UHQ7 104 aa23.05■■□□□ 1.28
FOXA1-203ENST00000553751 TUBE1Q9UJT0 475 aa23.05■■□□□ 1.28
FOXA1-203ENST00000553751 TRPC6Q9Y210 931 aa23.05■■□□□ 1.28
FOXA1-203ENST00000553751 KAT6AQ92794 2004 aa23.04■■□□□ 1.28
FOXA1-203ENST00000553751 BTBD18B2RXH4 712 aa23.04■■□□□ 1.28
FOXA1-203ENST00000553751 GAS7O60861 476 aa23.04■■□□□ 1.28
FOXA1-203ENST00000553751 NBNO60934 754 aa23.04■■□□□ 1.28
FOXA1-203ENST00000553751 CAND2O75155 1236 aa23.04■■□□□ 1.28
FOXA1-203ENST00000553751 PSMD10O75832 226 aa23.04■■□□□ 1.28
FOXA1-203ENST00000553751 PARNO95453 639 aaKnown RBP23.04■■□□□ 1.28
FOXA1-203ENST00000553751 CXCL10P02778 98 aa23.04■■□□□ 1.28
FOXA1-203ENST00000553751 INSRRP14616 1297 aa23.04■■□□□ 1.28
FOXA1-203ENST00000553751 HMGN5P82970 282 aaKnown RBP23.04■■□□□ 1.28
FOXA1-203ENST00000553751 PPP4R3AQ6IN85 833 aa23.04■■□□□ 1.28
FOXA1-203ENST00000553751 SWSAP1Q6NVH7 229 aa23.04■■□□□ 1.28
FOXA1-203ENST00000553751 RUFY4Q6ZNE9 571 aa23.04■■□□□ 1.28
FOXA1-203ENST00000553751 MTIF3Q9H2K0 278 aaKnown RBP23.04■■□□□ 1.28
FOXA1-203ENST00000553751 PCDHA10Q9Y5I2 948 aa23.04■■□□□ 1.28
FOXA1-203ENST00000553751 POTEB3A0JP26 581 aa23.03■■□□□ 1.28
FOXA1-203ENST00000553751 WDR64B1ANS9 1081 aa23.03■■□□□ 1.28
FOXA1-203ENST00000553751 PSAPP07602 524 aa23.03■■□□□ 1.28
FOXA1-203ENST00000553751 GCFC2P16383 781 aaKnown RBP23.03■■□□□ 1.28
FOXA1-203ENST00000553751 POTEBQ6S5H4 581 aa23.03■■□□□ 1.28
FOXA1-203ENST00000553751 TEKT3Q9BXF9 490 aa23.03■■□□□ 1.28
FOXA1-203ENST00000553751 FTOQ9C0B1 505 aaKnown RBP eCLIP23.03■■□□□ 1.28
FOXA1-203ENST00000553751 UNC45AQ9H3U1 944 aa23.03■■□□□ 1.28
FOXA1-203ENST00000553751 MAFBQ9Y5Q3 323 aaPredicted RBP23.03■■□□□ 1.28
FOXA1-203ENST00000553751 IGSF9BQ9UPX0 1349 aa23.03■■□□□ 1.28
FOXA1-203ENST00000553751 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.02■■□□□ 1.28
FOXA1-203ENST00000553751 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.02■■□□□ 1.28
FOXA1-203ENST00000553751 RRN3P2A6NIE6 340 aa23.02■■□□□ 1.28
FOXA1-203ENST00000553751 RSPH10B2B2RC85 870 aa23.02■■□□□ 1.28
FOXA1-203ENST00000553751 RBAK-RBAKDNI3L0D1 243 aa23.02■■□□□ 1.28
FOXA1-203ENST00000553751 CHMP2AO43633 222 aa23.02■■□□□ 1.28
FOXA1-203ENST00000553751 CCNT1O60563 726 aaKnown RBP23.02■■□□□ 1.28
FOXA1-203ENST00000553751 RSPH10BP0C881 870 aa23.02■■□□□ 1.28
FOXA1-203ENST00000553751 ATP4AP20648 1035 aa23.02■■□□□ 1.28
FOXA1-203ENST00000553751 IGBP1P78318 339 aa23.02■■□□□ 1.28
FOXA1-203ENST00000553751 TAF2Q6P1X5 1199 aa23.02■■□□□ 1.28
FOXA1-203ENST00000553751 PDXDC2PQ6P474 469 aa23.02■■□□□ 1.28
FOXA1-203ENST00000553751 B3GNT9Q6UX72 402 aa23.02■■□□□ 1.28
FOXA1-203ENST00000553751 ATP8B4Q8TF62 1192 aa23.02■■□□□ 1.28
FOXA1-203ENST00000553751 ZBTB10Q96DT7 871 aa23.02■■□□□ 1.28
FOXA1-203ENST00000553751 C8orf76Q96K31 380 aa23.02■■□□□ 1.28
FOXA1-203ENST00000553751 NAP1L4Q99733 375 aaKnown RBP23.02■■□□□ 1.28
FOXA1-203ENST00000553751 KCNMB3Q9NPA1 279 aa23.02■■□□□ 1.28
FOXA1-203ENST00000553751 DISC1Q9NRI5 854 aa23.02■■□□□ 1.28
FOXA1-203ENST00000553751 CTSHP09668 335 aa23.01■■□□□ 1.27
FOXA1-203ENST00000553751 ACTN1P12814 892 aa23.01■■□□□ 1.27
FOXA1-203ENST00000553751 JAK3P52333 1124 aa23.01■■□□□ 1.27
FOXA1-203ENST00000553751 GUCY1B3Q02153 619 aa23.01■■□□□ 1.27
FOXA1-203ENST00000553751 Q7L0L9 218 aa23.01■■□□□ 1.27
FOXA1-203ENST00000553751 RPAINQ86UA6 219 aa23.01■■□□□ 1.27
FOXA1-203ENST00000553751 TRAPPC12Q8WVT3 735 aa23.01■■□□□ 1.27
FOXA1-203ENST00000553751 TNPO1Q92973 898 aaKnown RBP23.01■■□□□ 1.27
FOXA1-203ENST00000553751 TMX3Q96JJ7 454 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms