RNA–Protein interactions for RNA: ENST00000553546.1

SDR39U1-205, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 648 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-205ENST00000553546 SIP14410 1827 aa17.26■□□□□ 0.35
SDR39U1-205ENST00000553546 ESYT2A0FGR8 921 aa17.26■□□□□ 0.35
SDR39U1-205ENST00000553546 RRN3P2A6NIE6 340 aa17.26■□□□□ 0.35
SDR39U1-205ENST00000553546 EPB41L2O43491 1005 aaKnown RBP17.26■□□□□ 0.35
SDR39U1-205ENST00000553546 SCG2P13521 617 aa17.26■□□□□ 0.35
SDR39U1-205ENST00000553546 MARK3P27448 753 aa17.26■□□□□ 0.35
SDR39U1-205ENST00000553546 CLK2P49760 499 aaKnown RBP17.26■□□□□ 0.35
SDR39U1-205ENST00000553546 APOBRQ0VD83 1088 aa17.26■□□□□ 0.35
SDR39U1-205ENST00000553546 GRB10Q13322 594 aa17.26■□□□□ 0.35
SDR39U1-205ENST00000553546 AAK1Q2M2I8 961 aa17.26■□□□□ 0.35
SDR39U1-205ENST00000553546 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.26■□□□□ 0.35
SDR39U1-205ENST00000553546 NIPA1Q7RTP0 329 aa17.26■□□□□ 0.35
SDR39U1-205ENST00000553546 BRF1Q92994 677 aa17.26■□□□□ 0.35
SDR39U1-205ENST00000553546 LMCD1Q9NZU5 365 aa17.26■□□□□ 0.35
SDR39U1-205ENST00000553546 MBLAC1A4D2B0 266 aaPredicted RBP17.25■□□□□ 0.35
SDR39U1-205ENST00000553546 LINC01553A4QN01 128 aa17.25■□□□□ 0.35
SDR39U1-205ENST00000553546 BMP1P13497 986 aa17.25■□□□□ 0.35
SDR39U1-205ENST00000553546 RPS6KB1P23443 525 aa17.25■□□□□ 0.35
SDR39U1-205ENST00000553546 ADD1P35611 737 aaKnown RBP17.25■□□□□ 0.35
SDR39U1-205ENST00000553546 ZNF76P36508 570 aa17.25■□□□□ 0.35
SDR39U1-205ENST00000553546 ERVK-21P61565 698 aa17.25■□□□□ 0.35
SDR39U1-205ENST00000553546 HTRA4P83105 476 aaPredicted RBP17.25■□□□□ 0.35
SDR39U1-205ENST00000553546 TFF2Q03403 129 aa17.25■□□□□ 0.35
SDR39U1-205ENST00000553546 SKIV2LQ15477 1246 aaKnown RBP17.25■□□□□ 0.35
SDR39U1-205ENST00000553546 FAM117BQ6P1L5 589 aa17.25■□□□□ 0.35
SDR39U1-205ENST00000553546 PGBD1Q96JS3 809 aa17.25■□□□□ 0.35
SDR39U1-205ENST00000553546 AGXT2Q9BYV1 514 aa17.25■□□□□ 0.35
SDR39U1-205ENST00000553546 IFIH1Q9BYX4 1025 aaKnown RBP17.25■□□□□ 0.35
SDR39U1-205ENST00000553546 C6orf50Q9HD87 102 aa17.25■□□□□ 0.35
SDR39U1-205ENST00000553546 TRANK1O15050 2925 aa17.24■□□□□ 0.35
SDR39U1-205ENST00000553546 COL4A6Q14031 1691 aa17.24■□□□□ 0.35
SDR39U1-205ENST00000553546 MEIS1O00470 390 aa17.24■□□□□ 0.35
SDR39U1-205ENST00000553546 CPA1P15085 419 aa17.24■□□□□ 0.35
SDR39U1-205ENST00000553546 SLC26A2P50443 739 aa17.24■□□□□ 0.35
SDR39U1-205ENST00000553546 KCNQ1P51787 676 aa17.24■□□□□ 0.35
SDR39U1-205ENST00000553546 ACTR2P61160 394 aa17.24■□□□□ 0.35
SDR39U1-205ENST00000553546 AKAP17AQ02040 695 aaKnown RBP17.24■□□□□ 0.35
SDR39U1-205ENST00000553546 PLPPR4Q7Z2D5 763 aa17.24■□□□□ 0.35
SDR39U1-205ENST00000553546 CYP2W1Q8TAV3 490 aa17.24■□□□□ 0.35
SDR39U1-205ENST00000553546 SAMD11Q96NU1 681 aa17.24■□□□□ 0.35
SDR39U1-205ENST00000553546 LRFN3Q9BTN0 628 aa17.24■□□□□ 0.35
SDR39U1-205ENST00000553546 ZMYND12Q9H0C1 365 aa17.24■□□□□ 0.35
SDR39U1-205ENST00000553546 AGO4Q9HCK5 861 aaKnown RBP17.24■□□□□ 0.35
SDR39U1-205ENST00000553546 TMEM260Q9NX78 707 aa17.24■□□□□ 0.35
SDR39U1-205ENST00000553546 COG5Q9UP83 839 aa17.24■□□□□ 0.35
SDR39U1-205ENST00000553546 TRPC6Q9Y210 931 aa17.24■□□□□ 0.35
SDR39U1-205ENST00000553546 PRPF3O43395 683 aaKnown RBP17.23■□□□□ 0.35
SDR39U1-205ENST00000553546 LPXNO60711 386 aa17.23■□□□□ 0.35
SDR39U1-205ENST00000553546 CHRNA1P02708 482 aa17.23■□□□□ 0.35
SDR39U1-205ENST00000553546 ARP10275 920 aa17.23■□□□□ 0.35
SDR39U1-205ENST00000553546 GNA11P29992 359 aa17.23■□□□□ 0.35
SDR39U1-205ENST00000553546 RUFY4Q6ZNE9 571 aa17.23■□□□□ 0.35
SDR39U1-205ENST00000553546 REXO1Q8N1G1 1221 aaKnown RBP17.23■□□□□ 0.35
SDR39U1-205ENST00000553546 SP7Q8TDD2 431 aaPredicted RBP17.23■□□□□ 0.35
SDR39U1-205ENST00000553546 TOP1MTQ969P6 601 aa17.23■□□□□ 0.35
SDR39U1-205ENST00000553546 YME1L1Q96TA2 773 aa17.23■□□□□ 0.35
SDR39U1-205ENST00000553546 PCYT2Q99447 389 aa17.23■□□□□ 0.35
SDR39U1-205ENST00000553546 EPHX3Q9H6B9 360 aa17.23■□□□□ 0.35
SDR39U1-205ENST00000553546 ARIH1Q9Y4X5 557 aaPredicted RBP17.23■□□□□ 0.35
SDR39U1-205ENST00000553546 NEFLP07196 543 aa17.22■□□□□ 0.35
SDR39U1-205ENST00000553546 CYP3A4P08684 503 aa17.22■□□□□ 0.35
SDR39U1-205ENST00000553546 GHRP10912 638 aa17.22■□□□□ 0.35
SDR39U1-205ENST00000553546 INSRRP14616 1297 aa17.22■□□□□ 0.35
SDR39U1-205ENST00000553546 STAT5BP51692 787 aa17.22■□□□□ 0.35
SDR39U1-205ENST00000553546 SETQ01105 290 aaPredicted RBP17.22■□□□□ 0.35
SDR39U1-205ENST00000553546 MGAT3Q09327 533 aa17.22■□□□□ 0.35
SDR39U1-205ENST00000553546 ITGB3BPQ13352 177 aaPredicted RBP17.22■□□□□ 0.35
SDR39U1-205ENST00000553546 MARCH8Q5T0T0 291 aa17.22■□□□□ 0.35
SDR39U1-205ENST00000553546 JAKMIP3Q5VZ66 844 aa17.22■□□□□ 0.35
SDR39U1-205ENST00000553546 SPRED2Q7Z698 418 aa17.22■□□□□ 0.35
SDR39U1-205ENST00000553546 PLA2G4DQ86XP0 818 aa17.22■□□□□ 0.35
SDR39U1-205ENST00000553546 CCDC148Q8NFR7 591 aa17.22■□□□□ 0.35
SDR39U1-205ENST00000553546 BICD2Q8TD16 824 aa17.22■□□□□ 0.35
SDR39U1-205ENST00000553546 GDPD5Q8WTR4 605 aa17.22■□□□□ 0.35
SDR39U1-205ENST00000553546 DNAJB3Q8WWF6 145 aa17.22■□□□□ 0.35
SDR39U1-205ENST00000553546 RNF26Q9BY78 433 aaPredicted RBP17.22■□□□□ 0.35
SDR39U1-205ENST00000553546 SUGCTQ9HAC7 445 aa17.22■□□□□ 0.35
SDR39U1-205ENST00000553546 MTUS1Q9ULD2 1270 aa17.22■□□□□ 0.35
SDR39U1-205ENST00000553546 HCN4Q9Y3Q4 1203 aa17.22■□□□□ 0.35
SDR39U1-205ENST00000553546 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.21■□□□□ 0.35
SDR39U1-205ENST00000553546 M0QZ92 97 aa17.21■□□□□ 0.35
SDR39U1-205ENST00000553546 ATG7O95352 703 aa17.21■□□□□ 0.35
SDR39U1-205ENST00000553546 IGBP1P78318 339 aa17.21■□□□□ 0.35
SDR39U1-205ENST00000553546 PLCB4Q15147 1175 aa17.21■□□□□ 0.35
SDR39U1-205ENST00000553546 IER5Q5VY09 327 aa17.21■□□□□ 0.35
SDR39U1-205ENST00000553546 FAM160B1Q5W0V3 765 aa17.21■□□□□ 0.35
SDR39U1-205ENST00000553546 KRT40Q6A162 431 aa17.21■□□□□ 0.35
SDR39U1-205ENST00000553546 FBXO22Q8NEZ5 403 aa17.21■□□□□ 0.35
SDR39U1-205ENST00000553546 CRYGNQ8WXF5 182 aa17.21■□□□□ 0.35
SDR39U1-205ENST00000553546 TCEAL9Q9UHQ7 104 aa17.21■□□□□ 0.35
SDR39U1-205ENST00000553546 SQORQ9Y6N5 450 aa17.21■□□□□ 0.35
SDR39U1-205ENST00000553546 POTEB3A0JP26 581 aa17.2■□□□□ 0.34
SDR39U1-205ENST00000553546 FAM86B1E9PN63 330 aa17.2■□□□□ 0.34
SDR39U1-205ENST00000553546 BACH1O14867 736 aa17.2■□□□□ 0.34
SDR39U1-205ENST00000553546 UPP2O95045 317 aa17.2■□□□□ 0.34
SDR39U1-205ENST00000553546 FAM86B2P0C5J1 330 aa17.2■□□□□ 0.34
SDR39U1-205ENST00000553546 IFNAR1P17181 557 aa17.2■□□□□ 0.34
SDR39U1-205ENST00000553546 EVCP57679 992 aa17.2■□□□□ 0.34
SDR39U1-205ENST00000553546 MRPS6P82932 125 aaKnown RBP17.2■□□□□ 0.34
SDR39U1-205ENST00000553546 LPIN1Q14693 890 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms