RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 EIF5P55010 431 aaKnown RBP5.96□□□□□ -1.46
ATXN3-220ENST00000553491 AUHQ13825 339 aaKnown RBP5.96□□□□□ -1.46
ATXN3-220ENST00000553491 MLANAQ16655 118 aa5.96□□□□□ -1.46
ATXN3-220ENST00000553491 AXDND1Q5T1B0 1012 aaPredicted RBP5.96□□□□□ -1.46
ATXN3-220ENST00000553491 SPATC1Q76KD6 591 aa5.96□□□□□ -1.46
ATXN3-220ENST00000553491 EEPD1Q7L9B9 569 aa5.96□□□□□ -1.46
ATXN3-220ENST00000553491 SHISA4Q96DD7 197 aa5.96□□□□□ -1.46
ATXN3-220ENST00000553491 RNPC3Q96LT9 517 aaKnown RBP5.96□□□□□ -1.46
ATXN3-220ENST00000553491 FOXP3Q9BZS1 431 aa5.96□□□□□ -1.46
ATXN3-220ENST00000553491 ASCC2Q9H1I8 757 aaPredicted RBP5.96□□□□□ -1.46
ATXN3-220ENST00000553491 KANSL2Q9H9L4 492 aa5.96□□□□□ -1.46
ATXN3-220ENST00000553491 SUSD2Q9UGT4 822 aa5.96□□□□□ -1.46
ATXN3-220ENST00000553491 ANKRD36CQ5JPF3 1778 aa5.95□□□□□ -1.46
ATXN3-220ENST00000553491 CCER2I3L3R5 266 aa5.95□□□□□ -1.46
ATXN3-220ENST00000553491 CBFA2T2O43439 604 aa5.95□□□□□ -1.46
ATXN3-220ENST00000553491 SUSD5O60279 629 aa5.95□□□□□ -1.46
ATXN3-220ENST00000553491 KRT1P04264 644 aa5.95□□□□□ -1.46
ATXN3-220ENST00000553491 RAC2P15153 192 aa5.95□□□□□ -1.46
ATXN3-220ENST00000553491 GPTP24298 496 aa5.95□□□□□ -1.46
ATXN3-220ENST00000553491 CHMP4BP1P59074 171 aa5.95□□□□□ -1.46
ATXN3-220ENST00000553491 IFRD2Q12894 506 aaPredicted RBP5.95□□□□□ -1.46
ATXN3-220ENST00000553491 NFIXQ14938 502 aa5.95□□□□□ -1.46
ATXN3-220ENST00000553491 HLFQ16534 295 aa5.95□□□□□ -1.46
ATXN3-220ENST00000553491 MTERF2Q49AM1 385 aa5.95□□□□□ -1.46
ATXN3-220ENST00000553491 ANKRD39Q53RE8 183 aa5.95□□□□□ -1.46
ATXN3-220ENST00000553491 TBC1D9BQ66K14 1250 aa5.95□□□□□ -1.46
ATXN3-220ENST00000553491 DCAF15Q66K64 600 aa5.95□□□□□ -1.46
ATXN3-220ENST00000553491 SDE2Q6IQ49 451 aa5.95□□□□□ -1.46
ATXN3-220ENST00000553491 TTLL7Q6ZT98 887 aa5.95□□□□□ -1.46
ATXN3-220ENST00000553491 COPS6Q7L5N1 327 aa5.95□□□□□ -1.46
ATXN3-220ENST00000553491 C7orf61Q8IZ16 206 aa5.95□□□□□ -1.46
ATXN3-220ENST00000553491 C8orf58Q8NAV2 365 aa5.95□□□□□ -1.46
ATXN3-220ENST00000553491 ST13P5Q8NFI4 369 aaPredicted RBP5.95□□□□□ -1.46
ATXN3-220ENST00000553491 NLGN2Q8NFZ4 835 aa5.95□□□□□ -1.46
ATXN3-220ENST00000553491 ZNF622Q969S3 477 aaKnown RBP eCLIP5.95□□□□□ -1.46
ATXN3-220ENST00000553491 HAUS7Q99871 368 aa5.95□□□□□ -1.46
ATXN3-220ENST00000553491 RNF32Q9H0A6 362 aa5.95□□□□□ -1.46
ATXN3-220ENST00000553491 IFT57Q9NWB7 429 aa5.95□□□□□ -1.46
ATXN3-220ENST00000553491 BABAM1Q9NWV8 329 aa5.95□□□□□ -1.46
ATXN3-220ENST00000553491 PRR13Q9NZ81 148 aa5.95□□□□□ -1.46
ATXN3-220ENST00000553491 PFDN2Q9UHV9 154 aa5.95□□□□□ -1.46
ATXN3-220ENST00000553491 TCFL5Q9UL49 500 aa5.95□□□□□ -1.46
ATXN3-220ENST00000553491 NIP7Q9Y221 180 aaKnown RBP eCLIP5.95□□□□□ -1.46
ATXN3-220ENST00000553491 ZNF652Q9Y2D9 606 aa5.95□□□□□ -1.46
ATXN3-220ENST00000553491 BCORQ6W2J9 1755 aa5.95□□□□□ -1.46
ATXN3-220ENST00000553491 CICQ96RK0 1608 aaPredicted RBP5.95□□□□□ -1.46
ATXN3-220ENST00000553491 USP42Q9H9J4 1324 aaKnown RBP5.95□□□□□ -1.46
ATXN3-220ENST00000553491 ANKRD31Q8N7Z5 1873 aa5.94□□□□□ -1.46
ATXN3-220ENST00000553491 FITM1A5D6W6 292 aa5.94□□□□□ -1.46
ATXN3-220ENST00000553491 EPHX1P07099 455 aa5.94□□□□□ -1.46
ATXN3-220ENST00000553491 TM4SF1P30408 202 aa5.94□□□□□ -1.46
ATXN3-220ENST00000553491 EXOSC9Q06265 439 aaKnown RBP5.94□□□□□ -1.46
ATXN3-220ENST00000553491 SLC10A6Q3KNW5 377 aa5.94□□□□□ -1.46
ATXN3-220ENST00000553491 ZPBP2Q6X784 338 aa5.94□□□□□ -1.46
ATXN3-220ENST00000553491 NBPF5PQ86XG9 351 aaPredicted RBP5.94□□□□□ -1.46
ATXN3-220ENST00000553491 CILP2Q8IUL8 1156 aa5.94□□□□□ -1.46
ATXN3-220ENST00000553491 WDR63Q8IWG1 891 aa5.94□□□□□ -1.46
ATXN3-220ENST00000553491 CCDC144CPQ8IYA2 1237 aa5.94□□□□□ -1.46
ATXN3-220ENST00000553491 LILRA2Q8N149 483 aa5.94□□□□□ -1.46
ATXN3-220ENST00000553491 SH3TC2Q8TF17 1288 aa5.94□□□□□ -1.46
ATXN3-220ENST00000553491 FAM84AQ96KN4 292 aa5.94□□□□□ -1.46
ATXN3-220ENST00000553491 STK31Q9BXU1 1019 aa5.94□□□□□ -1.46
ATXN3-220ENST00000553491 MKRN2Q9H000 416 aaKnown RBP5.94□□□□□ -1.46
ATXN3-220ENST00000553491 KCNK12Q9HB15 430 aa5.94□□□□□ -1.46
ATXN3-220ENST00000553491 CHST7Q9NS84 486 aa5.94□□□□□ -1.46
ATXN3-220ENST00000553491 GFOD1Q9NXC2 390 aa5.94□□□□□ -1.46
ATXN3-220ENST00000553491 CHPF2Q9P2E5 772 aa5.94□□□□□ -1.46
ATXN3-220ENST00000553491 ZMYM5Q9UJ78 669 aa5.94□□□□□ -1.46
ATXN3-220ENST00000553491 ZNF451Q9Y4E5 1061 aa5.94□□□□□ -1.46
ATXN3-220ENST00000553491 PCDHB12Q9Y5F1 795 aa5.94□□□□□ -1.46
ATXN3-220ENST00000553491 CD2APQ9Y5K6 639 aa5.94□□□□□ -1.46
ATXN3-220ENST00000553491 KIF13BQ9NQT8 1826 aa5.94□□□□□ -1.46
ATXN3-220ENST00000553491 SBF1O95248 1867 aa5.94□□□□□ -1.46
ATXN3-220ENST00000553491 MYH3P11055 1940 aa5.93□□□□□ -1.46
ATXN3-220ENST00000553491 ARFGEF2Q9Y6D5 1785 aa5.93□□□□□ -1.46
ATXN3-220ENST00000553491 SPEF2Q9C093 1822 aa5.93□□□□□ -1.46
ATXN3-220ENST00000553491 ANKRD34BA5PLL1 514 aa5.93□□□□□ -1.46
ATXN3-220ENST00000553491 H0YIN7 160 aa5.93□□□□□ -1.46
ATXN3-220ENST00000553491 PSPNO60542 156 aa5.93□□□□□ -1.46
ATXN3-220ENST00000553491 CAMTA2O94983 1202 aa5.93□□□□□ -1.46
ATXN3-220ENST00000553491 SYPP08247 313 aa5.93□□□□□ -1.46
ATXN3-220ENST00000553491 DPEP1P16444 411 aa5.93□□□□□ -1.46
ATXN3-220ENST00000553491 CHRNA5P30532 468 aa5.93□□□□□ -1.46
ATXN3-220ENST00000553491 PCBP3P57721 371 aaKnown RBP5.93□□□□□ -1.46
ATXN3-220ENST00000553491 ST5P78524 1137 aa5.93□□□□□ -1.46
ATXN3-220ENST00000553491 DDR1Q08345 913 aa5.93□□□□□ -1.46
ATXN3-220ENST00000553491 ZNF124Q15973 351 aa5.93□□□□□ -1.46
ATXN3-220ENST00000553491 PROSER3Q2NL68 480 aa5.93□□□□□ -1.46
ATXN3-220ENST00000553491 TWISTNBQ3B726 338 aaPredicted RBP5.93□□□□□ -1.46
ATXN3-220ENST00000553491 CCDC30Q5VVM6 783 aa5.93□□□□□ -1.46
ATXN3-220ENST00000553491 C2CD5Q86YS7 1000 aa5.93□□□□□ -1.46
ATXN3-220ENST00000553491 OXR1Q8N573 874 aa5.93□□□□□ -1.46
ATXN3-220ENST00000553491 TSPYL6Q8N831 410 aa5.93□□□□□ -1.46
ATXN3-220ENST00000553491 ZNF513Q8N8E2 541 aaPredicted RBP5.93□□□□□ -1.46
ATXN3-220ENST00000553491 ANKS4BQ8N8V4 417 aa5.93□□□□□ -1.46
ATXN3-220ENST00000553491 ZNF669Q96BR6 464 aaPredicted RBP5.93□□□□□ -1.46
ATXN3-220ENST00000553491 KLHL25Q9H0H3 589 aa5.93□□□□□ -1.46
ATXN3-220ENST00000553491 MYH16Q9H6N6 1097 aa5.93□□□□□ -1.46
ATXN3-220ENST00000553491 DDX21Q9NR30 783 aaKnown RBP eCLIP5.93□□□□□ -1.46
ATXN3-220ENST00000553491 HYPKQ9NX55 129 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms