RNA–Protein interactions for RNA: ENST00000553145.1

HDAC4-217, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-217ENST00000553145 CCDC60Q8IWA6 550 aaPredicted RBP21.3■■□□□ 1
HDAC4-217ENST00000553145 CCDC83Q8IWF9 413 aa21.3■■□□□ 1
HDAC4-217ENST00000553145 GJA10Q969M2 543 aa21.3■■□□□ 1
HDAC4-217ENST00000553145 FTOQ9C0B1 505 aaKnown RBP eCLIP21.3■■□□□ 1
HDAC4-217ENST00000553145 ZBBXA8MT70 800 aa21.29■■□□□ 1
HDAC4-217ENST00000553145 CXCL10P02778 98 aa21.29■■□□□ 1
HDAC4-217ENST00000553145 FOSBP53539 338 aa21.29■■□□□ 1
HDAC4-217ENST00000553145 Q4G0T1 1027 aa21.29■■□□□ 1
HDAC4-217ENST00000553145 EARS2Q5JPH6 523 aaKnown RBP21.29■■□□□ 1
HDAC4-217ENST00000553145 MARCH8Q5T0T0 291 aa21.29■■□□□ 1
HDAC4-217ENST00000553145 RUFY4Q6ZNE9 571 aa21.29■■□□□ 1
HDAC4-217ENST00000553145 PLPPR4Q7Z2D5 763 aa21.29■■□□□ 1
HDAC4-217ENST00000553145 ZBTB10Q96DT7 871 aa21.29■■□□□ 1
HDAC4-217ENST00000553145 MTIF3Q9H2K0 278 aaKnown RBP21.29■■□□□ 1
HDAC4-217ENST00000553145 CYP3A7-CYP3A51PA0A087WV96 503 aa21.28■■□□□ 1
HDAC4-217ENST00000553145 FAM205CA6NFA0 338 aa21.28■■□□□ 1
HDAC4-217ENST00000553145 INSRRP14616 1297 aa21.28■■□□□ 1
HDAC4-217ENST00000553145 CYP3A7P24462 503 aa21.28■■□□□ 1
HDAC4-217ENST00000553145 PBX2P40425 430 aa21.28■■□□□ 1
HDAC4-217ENST00000553145 ZNF746Q6NUN9 644 aaPredicted RBP21.28■■□□□ 1
HDAC4-217ENST00000553145 SLC5A5Q92911 643 aa21.28■■□□□ 1
HDAC4-217ENST00000553145 FAM161BQ96MY7 647 aa21.28■■□□□ 1
HDAC4-217ENST00000553145 MBOAT7Q96N66 472 aa21.28■■□□□ 1
HDAC4-217ENST00000553145 OSBPL7Q9BZF2 842 aa21.28■■□□□ 1
HDAC4-217ENST00000553145 MTMR10Q9NXD2 777 aa21.28■■□□□ 1
HDAC4-217ENST00000553145 TRPC6Q9Y210 931 aa21.28■■□□□ 1
HDAC4-217ENST00000553145 CCDC194A0A1B0GVG4 234 aa21.27■■□□□ 1
HDAC4-217ENST00000553145 MBLAC1A4D2B0 266 aaPredicted RBP21.27■■□□□ 1
HDAC4-217ENST00000553145 BACH1O14867 736 aa21.27■■□□□ 1
HDAC4-217ENST00000553145 PARNO95453 639 aaKnown RBP21.27■■□□□ 1
HDAC4-217ENST00000553145 CTSHP09668 335 aa21.27■■□□□ 1
HDAC4-217ENST00000553145 ACTN1P12814 892 aa21.27■■□□□ 1
HDAC4-217ENST00000553145 DNAJB2P25686 324 aa21.27■■□□□ 1
HDAC4-217ENST00000553145 IGBP1P78318 339 aa21.27■■□□□ 1
HDAC4-217ENST00000553145 KRT76Q01546 638 aa21.27■■□□□ 1
HDAC4-217ENST00000553145 NR5A1Q13285 461 aa21.27■■□□□ 1
HDAC4-217ENST00000553145 ZNF697Q5TEC3 545 aa21.27■■□□□ 1
HDAC4-217ENST00000553145 SWSAP1Q6NVH7 229 aa21.27■■□□□ 1
HDAC4-217ENST00000553145 MIS18BP1Q6P0N0 1132 aa21.27■■□□□ 1
HDAC4-217ENST00000553145 MOXD1Q6UVY6 613 aa21.27■■□□□ 1
HDAC4-217ENST00000553145 PIK3AP1Q6ZUJ8 805 aa21.27■■□□□ 1
HDAC4-217ENST00000553145 TRAPPC12Q8WVT3 735 aa21.27■■□□□ 1
HDAC4-217ENST00000553145 TNFRSF25Q93038 417 aa21.27■■□□□ 1
HDAC4-217ENST00000553145 PBX4Q9BYU1 374 aa21.27■■□□□ 1
HDAC4-217ENST00000553145 TTYH1Q9H313 450 aaPredicted RBP21.27■■□□□ 1
HDAC4-217ENST00000553145 ZNF302Q9NR11 478 aa21.27■■□□□ 1
HDAC4-217ENST00000553145 TUBE1Q9UJT0 475 aa21.27■■□□□ 1
HDAC4-217ENST00000553145 SLC4A7Q9Y6M7 1214 aa21.27■■□□□ 1
HDAC4-217ENST00000553145 LAMA2P24043 3122 aaKnown RBP21.27■■□□□ 1
HDAC4-217ENST00000553145 GBF1Q92538 1859 aa21.26■□□□□ 0.99
HDAC4-217ENST00000553145 RSPH10B2B2RC85 870 aa21.26■□□□□ 0.99
HDAC4-217ENST00000553145 SLC37A4O43826 429 aa21.26■□□□□ 0.99
HDAC4-217ENST00000553145 RSPH10BP0C881 870 aa21.26■□□□□ 0.99
HDAC4-217ENST00000553145 ATP4AP20648 1035 aa21.26■□□□□ 0.99
HDAC4-217ENST00000553145 KRT2P35908 639 aa21.26■□□□□ 0.99
HDAC4-217ENST00000553145 RABEP1Q15276 862 aa21.26■□□□□ 0.99
HDAC4-217ENST00000553145 LETM2Q2VYF4 491 aa21.26■□□□□ 0.99
HDAC4-217ENST00000553145 FAM160B1Q5W0V3 765 aa21.26■□□□□ 0.99
HDAC4-217ENST00000553145 ZSCAN31Q96LW9 406 aaPredicted RBP21.26■□□□□ 0.99
HDAC4-217ENST00000553145 RIT2Q99578 217 aa21.26■□□□□ 0.99
HDAC4-217ENST00000553145 POTEB3A0JP26 581 aa21.25■□□□□ 0.99
HDAC4-217ENST00000553145 GAS7O60861 476 aa21.25■□□□□ 0.99
HDAC4-217ENST00000553145 CAND2O75155 1236 aa21.25■□□□□ 0.99
HDAC4-217ENST00000553145 PSMD10O75832 226 aa21.25■□□□□ 0.99
HDAC4-217ENST00000553145 MMP1P03956 469 aa21.25■□□□□ 0.99
HDAC4-217ENST00000553145 SLC26A2P50443 739 aa21.25■□□□□ 0.99
HDAC4-217ENST00000553145 LRCH2Q5VUJ6 765 aa21.25■□□□□ 0.99
HDAC4-217ENST00000553145 KRT40Q6A162 431 aa21.25■□□□□ 0.99
HDAC4-217ENST00000553145 PDXDC2PQ6P474 469 aa21.25■□□□□ 0.99
HDAC4-217ENST00000553145 CNKSR3Q6P9H4 555 aa21.25■□□□□ 0.99
HDAC4-217ENST00000553145 POTEBQ6S5H4 581 aa21.25■□□□□ 0.99
HDAC4-217ENST00000553145 NEK8Q86SG6 692 aa21.25■□□□□ 0.99
HDAC4-217ENST00000553145 SMAP1Q8IYB5 467 aaPredicted RBP21.25■□□□□ 0.99
HDAC4-217ENST00000553145 ETNPPLQ8TBG4 499 aa21.25■□□□□ 0.99
HDAC4-217ENST00000553145 KAT6AQ92794 2004 aa21.25■□□□□ 0.99
HDAC4-217ENST00000553145 UNC45AQ9H3U1 944 aa21.25■□□□□ 0.99
HDAC4-217ENST00000553145 UPF2Q9HAU5 1272 aaKnown RBP21.25■□□□□ 0.99
HDAC4-217ENST00000553145 DDX25Q9UHL0 483 aaKnown RBP21.25■□□□□ 0.99
HDAC4-217ENST00000553145 PCDHA10Q9Y5I2 948 aa21.25■□□□□ 0.99
HDAC4-217ENST00000553145 SIP14410 1827 aa21.25■□□□□ 0.99
HDAC4-217ENST00000553145 PTPRSQ13332 1948 aa21.24■□□□□ 0.99
HDAC4-217ENST00000553145 RRN3P2A6NIE6 340 aa21.24■□□□□ 0.99
HDAC4-217ENST00000553145 RABGGTBP53611 331 aa21.24■□□□□ 0.99
HDAC4-217ENST00000553145 ATP8B4Q8TF62 1192 aa21.24■□□□□ 0.99
HDAC4-217ENST00000553145 TBC1D32Q96NH3 1257 aa21.24■□□□□ 0.99
HDAC4-217ENST00000553145 GUCD1Q96NT3 240 aa21.24■□□□□ 0.99
HDAC4-217ENST00000553145 LLPHQ9BRT6 129 aaKnown RBP21.24■□□□□ 0.99
HDAC4-217ENST00000553145 TEKT3Q9BXF9 490 aa21.24■□□□□ 0.99
HDAC4-217ENST00000553145 SEMA6BQ9H3T3 888 aa21.24■□□□□ 0.99
HDAC4-217ENST00000553145 SH2B1Q9NRF2 756 aaPredicted RBP21.24■□□□□ 0.99
HDAC4-217ENST00000553145 TCEAL9Q9UHQ7 104 aa21.24■□□□□ 0.99
HDAC4-217ENST00000553145 MAFBQ9Y5Q3 323 aaPredicted RBP21.24■□□□□ 0.99
HDAC4-217ENST00000553145 WDR64B1ANS9 1081 aa21.23■□□□□ 0.99
HDAC4-217ENST00000553145 BTBD18B2RXH4 712 aa21.23■□□□□ 0.99
HDAC4-217ENST00000553145 CHMP2AO43633 222 aa21.23■□□□□ 0.99
HDAC4-217ENST00000553145 BAIAP3O94812 1187 aa21.23■□□□□ 0.99
HDAC4-217ENST00000553145 CD2BP2O95400 341 aaKnown RBP21.23■□□□□ 0.99
HDAC4-217ENST00000553145 PSAPP07602 524 aa21.23■□□□□ 0.99
HDAC4-217ENST00000553145 ATP2A2P16615 1042 aaKnown RBP21.23■□□□□ 0.99
HDAC4-217ENST00000553145 FAM26DQ5JW98 314 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms