RNA–Protein interactions for RNA: ENST00000552800.2

TMEM116-216, Transcript of transmembrane protein 116, humanhuman

TSL 3

Gene TMEM116, Length 485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-216ENST00000552800 PABPC4Q13310 644 aaKnown RBP eCLIP10.95□□□□□ -0.66
TMEM116-216ENST00000552800 STIM1Q13586 685 aa10.95□□□□□ -0.66
TMEM116-216ENST00000552800 MCM6Q14566 821 aa10.95□□□□□ -0.66
TMEM116-216ENST00000552800 GPR162Q16538 588 aa10.95□□□□□ -0.66
TMEM116-216ENST00000552800 VSTM4Q8IW00 320 aa10.95□□□□□ -0.66
TMEM116-216ENST00000552800 LRRC8AQ8IWT6 810 aa10.95□□□□□ -0.66
TMEM116-216ENST00000552800 MORC4Q8TE76 937 aa10.95□□□□□ -0.66
TMEM116-216ENST00000552800 NSUN6Q8TEA1 469 aaKnown RBP10.95□□□□□ -0.66
TMEM116-216ENST00000552800 STAMQ92783 540 aa10.95□□□□□ -0.66
TMEM116-216ENST00000552800 WNK4Q96J92 1243 aa10.95□□□□□ -0.66
TMEM116-216ENST00000552800 CDK5RAP3Q96JB5 506 aa10.95□□□□□ -0.66
TMEM116-216ENST00000552800 CDHR1Q96JP9 859 aa10.95□□□□□ -0.66
TMEM116-216ENST00000552800 NACC1Q96RE7 527 aa10.95□□□□□ -0.66
TMEM116-216ENST00000552800 TAAR1Q96RJ0 339 aa10.95□□□□□ -0.66
TMEM116-216ENST00000552800 XPO4Q9C0E2 1151 aaKnown RBP10.95□□□□□ -0.66
TMEM116-216ENST00000552800 ACAD9Q9H845 621 aa10.95□□□□□ -0.66
TMEM116-216ENST00000552800 RNF146Q9NTX7 359 aa10.95□□□□□ -0.66
TMEM116-216ENST00000552800 SPTLC3Q9NUV7 552 aa10.95□□□□□ -0.66
TMEM116-216ENST00000552800 CYP39A1Q9NYL5 469 aa10.95□□□□□ -0.66
TMEM116-216ENST00000552800 TSKSQ9UJT2 592 aa10.95□□□□□ -0.66
TMEM116-216ENST00000552800 DBR1Q9UK59 544 aaKnown RBP10.95□□□□□ -0.66
TMEM116-216ENST00000552800 KIAA1024Q9UPX6 916 aa10.95□□□□□ -0.66
TMEM116-216ENST00000552800 PFASO15067 1338 aa10.94□□□□□ -0.66
TMEM116-216ENST00000552800 ITIH6Q6UXX5 1313 aa10.94□□□□□ -0.66
TMEM116-216ENST00000552800 EML1O00423 815 aa10.94□□□□□ -0.66
TMEM116-216ENST00000552800 PSMA7O14818 248 aa10.94□□□□□ -0.66
TMEM116-216ENST00000552800 KIF20AO95235 890 aa10.94□□□□□ -0.66
TMEM116-216ENST00000552800 ATP1A3P13637 1013 aa10.94□□□□□ -0.66
TMEM116-216ENST00000552800 SFNP31947 248 aa10.94□□□□□ -0.66
TMEM116-216ENST00000552800 ZNF131P52739 623 aa10.94□□□□□ -0.66
TMEM116-216ENST00000552800 MARSP56192 900 aaKnown RBP10.94□□□□□ -0.66
TMEM116-216ENST00000552800 LRRC63Q05C16 580 aa10.94□□□□□ -0.66
TMEM116-216ENST00000552800 PDE4DQ08499 809 aa10.94□□□□□ -0.66
TMEM116-216ENST00000552800 DGKZQ13574 1117 aa10.94□□□□□ -0.66
TMEM116-216ENST00000552800 BAATQ14032 418 aaPredicted RBP10.94□□□□□ -0.66
TMEM116-216ENST00000552800 NFIL3Q16649 462 aa10.94□□□□□ -0.66
TMEM116-216ENST00000552800 BMT2Q1RMZ1 405 aa10.94□□□□□ -0.66
TMEM116-216ENST00000552800 LRCH2Q5VUJ6 765 aa10.94□□□□□ -0.66
TMEM116-216ENST00000552800 GPAT2Q6NUI2 795 aa10.94□□□□□ -0.66
TMEM116-216ENST00000552800 CPXCR1Q8N123 301 aa10.94□□□□□ -0.66
TMEM116-216ENST00000552800 KIAA0895Q8NCT3 520 aa10.94□□□□□ -0.66
TMEM116-216ENST00000552800 SHCBP1Q8NEM2 672 aa10.94□□□□□ -0.66
TMEM116-216ENST00000552800 KIAA1524Q8TCG1 905 aa10.94□□□□□ -0.66
TMEM116-216ENST00000552800 NAP1L5Q96NT1 182 aaPredicted RBP10.94□□□□□ -0.66
TMEM116-216ENST00000552800 RMDN3Q96TC7 470 aa10.94□□□□□ -0.66
TMEM116-216ENST00000552800 DUSP9Q99956 384 aaKnown RBP10.94□□□□□ -0.66
TMEM116-216ENST00000552800 ZNF577Q9BSK1 485 aa10.94□□□□□ -0.66
TMEM116-216ENST00000552800 TIPINQ9BVW5 301 aa10.94□□□□□ -0.66
TMEM116-216ENST00000552800 TEKT3Q9BXF9 490 aa10.94□□□□□ -0.66
TMEM116-216ENST00000552800 OLFML3Q9NRN5 406 aa10.94□□□□□ -0.66
TMEM116-216ENST00000552800 SAMSN1Q9NSI8 373 aaKnown RBP10.94□□□□□ -0.66
TMEM116-216ENST00000552800 INTS13Q9NVM9 706 aa10.94□□□□□ -0.66
TMEM116-216ENST00000552800 IFNKQ9P0W0 207 aa10.94□□□□□ -0.66
TMEM116-216ENST00000552800 SEL1LQ9UBV2 794 aa10.94□□□□□ -0.66
TMEM116-216ENST00000552800 SPATA31C2B4DYI2 1134 aa10.93□□□□□ -0.66
TMEM116-216ENST00000552800 ATG7O95352 703 aa10.93□□□□□ -0.66
TMEM116-216ENST00000552800 P4HBP07237 508 aaKnown RBP10.93□□□□□ -0.66
TMEM116-216ENST00000552800 NR3C2P08235 984 aa10.93□□□□□ -0.66
TMEM116-216ENST00000552800 TGFB3P10600 412 aa10.93□□□□□ -0.66
TMEM116-216ENST00000552800 MAPTP10636 758 aaKnown RBP10.93□□□□□ -0.66
TMEM116-216ENST00000552800 GUCY2CP25092 1073 aa10.93□□□□□ -0.66
TMEM116-216ENST00000552800 GIT2Q14161 759 aa10.93□□□□□ -0.66
TMEM116-216ENST00000552800 ARID5BQ14865 1188 aa10.93□□□□□ -0.66
TMEM116-216ENST00000552800 ZCWPW2Q504Y3 356 aa10.93□□□□□ -0.66
TMEM116-216ENST00000552800 SNRNP48Q6IEG0 339 aaKnown RBP10.93□□□□□ -0.66
TMEM116-216ENST00000552800 ZNF746Q6NUN9 644 aaPredicted RBP10.93□□□□□ -0.66
TMEM116-216ENST00000552800 C1orf186Q6ZWK4 172 aa10.93□□□□□ -0.66
TMEM116-216ENST00000552800 EPM2AIP1Q7L775 607 aaPredicted RBP10.93□□□□□ -0.66
TMEM116-216ENST00000552800 CCDC186Q7Z3E2 898 aa10.93□□□□□ -0.66
TMEM116-216ENST00000552800 CCDC65Q8IXS2 484 aa10.93□□□□□ -0.66
TMEM116-216ENST00000552800 C4orf19Q8IY42 314 aa10.93□□□□□ -0.66
TMEM116-216ENST00000552800 NELFBQ8WX92 580 aa10.93□□□□□ -0.66
TMEM116-216ENST00000552800 P2RX5Q93086 422 aa10.93□□□□□ -0.66
TMEM116-216ENST00000552800 STRA6Q9BX79 667 aa10.93□□□□□ -0.66
TMEM116-216ENST00000552800 KCNF1Q9H3M0 494 aa10.93□□□□□ -0.66
TMEM116-216ENST00000552800 A1CFQ9NQ94 594 aaKnown RBP10.93□□□□□ -0.66
TMEM116-216ENST00000552800 EXOC1Q9NV70 894 aa10.93□□□□□ -0.66
TMEM116-216ENST00000552800 ODF2LQ9ULJ1 636 aa10.93□□□□□ -0.66
TMEM116-216ENST00000552800 VPS9D1Q9Y2B5 631 aa10.93□□□□□ -0.66
TMEM116-216ENST00000552800 GDAQ9Y2T3 454 aa10.93□□□□□ -0.66
TMEM116-216ENST00000552800 CTDP1Q9Y5B0 961 aaPredicted RBP10.93□□□□□ -0.66
TMEM116-216ENST00000552800 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.93□□□□□ -0.66
TMEM116-216ENST00000552800 UTRNP46939 3433 aa10.93□□□□□ -0.66
TMEM116-216ENST00000552800 LCTP09848 1927 aa10.92□□□□□ -0.66
TMEM116-216ENST00000552800 WDR81Q562E7 1941 aa10.92□□□□□ -0.66
TMEM116-216ENST00000552800 SYNRGQ9UMZ2 1314 aa10.92□□□□□ -0.66
TMEM116-216ENST00000552800 DNAJC25-GNG10A0A024R161 153 aa10.92□□□□□ -0.66
TMEM116-216ENST00000552800 A0A1W2PQC6 194 aa10.92□□□□□ -0.66
TMEM116-216ENST00000552800 E9PMD0 336 aa10.92□□□□□ -0.66
TMEM116-216ENST00000552800 TK2O00142 265 aa10.92□□□□□ -0.66
TMEM116-216ENST00000552800 HRO43593 1189 aa10.92□□□□□ -0.66
TMEM116-216ENST00000552800 GAS7O60861 476 aa10.92□□□□□ -0.66
TMEM116-216ENST00000552800 EIF3JO75822 258 aaKnown RBP10.92□□□□□ -0.66
TMEM116-216ENST00000552800 CNMDO75829 334 aa10.92□□□□□ -0.66
TMEM116-216ENST00000552800 FGFR1OPO95684 399 aaKnown RBP10.92□□□□□ -0.66
TMEM116-216ENST00000552800 TAL1P17542 331 aaPredicted RBP10.92□□□□□ -0.66
TMEM116-216ENST00000552800 GAP43P17677 238 aa10.92□□□□□ -0.66
TMEM116-216ENST00000552800 CCND2P30279 289 aa10.92□□□□□ -0.66
TMEM116-216ENST00000552800 JAK3P52333 1124 aa10.92□□□□□ -0.66
TMEM116-216ENST00000552800 PSMC6P62333 389 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms