RNA–Protein interactions for RNA: ENST00000552656.5

RNF41-211, Transcript of ring finger protein 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF41, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-211ENST00000552656 VCPP55072 806 aaKnown RBP12.16□□□□□ -0.46
RNF41-211ENST00000552656 ZXDAP98168 799 aa12.16□□□□□ -0.46
RNF41-211ENST00000552656 CBX2Q14781 532 aaPredicted RBP12.16□□□□□ -0.46
RNF41-211ENST00000552656 IMMTQ16891 758 aaKnown RBP12.16□□□□□ -0.46
RNF41-211ENST00000552656 GNPTABQ3T906 1256 aa12.16□□□□□ -0.46
RNF41-211ENST00000552656 KLHL23Q8NBE8 558 aa12.16□□□□□ -0.46
RNF41-211ENST00000552656 PIBF1Q8WXW3 757 aa12.16□□□□□ -0.46
RNF41-211ENST00000552656 P2RX5Q93086 422 aa12.16□□□□□ -0.46
RNF41-211ENST00000552656 PBXIP1Q96AQ6 731 aa12.16□□□□□ -0.46
RNF41-211ENST00000552656 PLVAPQ9BX97 442 aa12.16□□□□□ -0.46
RNF41-211ENST00000552656 FAM86C1Q9NVL1 165 aa12.16□□□□□ -0.46
RNF41-211ENST00000552656 ZBTB47Q9UFB7 747 aaPredicted RBP12.16□□□□□ -0.46
RNF41-211ENST00000552656 ZNF215Q9UL58 517 aaPredicted RBP12.16□□□□□ -0.46
RNF41-211ENST00000552656 BARX2Q9UMQ3 279 aaPredicted RBP12.16□□□□□ -0.46
RNF41-211ENST00000552656 RWDD3Q9Y3V2 267 aa12.16□□□□□ -0.46
RNF41-211ENST00000552656 CDY2AQ9Y6F7 541 aa12.16□□□□□ -0.46
RNF41-211ENST00000552656 PNMA6FA0A0J9YX94 578 aa12.15□□□□□ -0.46
RNF41-211ENST00000552656 MEIS2O14770 477 aa12.15□□□□□ -0.46
RNF41-211ENST00000552656 KCNA2P16389 499 aa12.15□□□□□ -0.46
RNF41-211ENST00000552656 MARK3P27448 753 aa12.15□□□□□ -0.46
RNF41-211ENST00000552656 NRIP1P48552 1158 aa12.15□□□□□ -0.46
RNF41-211ENST00000552656 TROAPQ12815 778 aa12.15□□□□□ -0.46
RNF41-211ENST00000552656 COASYQ13057 564 aa12.15□□□□□ -0.46
RNF41-211ENST00000552656 GRIK4Q16099 956 aa12.15□□□□□ -0.46
RNF41-211ENST00000552656 PAN2Q504Q3 1202 aaKnown RBP12.15□□□□□ -0.46
RNF41-211ENST00000552656 B4GALNT3Q6L9W6 998 aa12.15□□□□□ -0.46
RNF41-211ENST00000552656 USP17L6PQ6QN14 398 aa12.15□□□□□ -0.46
RNF41-211ENST00000552656 RBM23Q86U06 439 aaKnown RBP12.15□□□□□ -0.46
RNF41-211ENST00000552656 EFHBQ8N7U6 833 aa12.15□□□□□ -0.46
RNF41-211ENST00000552656 VN1R2Q8NFZ6 395 aa12.15□□□□□ -0.46
RNF41-211ENST00000552656 POF1BQ8WVV4 589 aa12.15□□□□□ -0.46
RNF41-211ENST00000552656 ASIC4Q96FT7 647 aa12.15□□□□□ -0.46
RNF41-211ENST00000552656 SENP7Q9BQF6 1050 aa12.15□□□□□ -0.46
RNF41-211ENST00000552656 OSBPL3Q9H4L5 887 aa12.15□□□□□ -0.46
RNF41-211ENST00000552656 USP15Q9Y4E8 981 aaPredicted RBP12.15□□□□□ -0.46
RNF41-211ENST00000552656 VPS13AQ96RL7 3174 aa12.15□□□□□ -0.46
RNF41-211ENST00000552656 STAM2O75886 525 aa12.14□□□□□ -0.47
RNF41-211ENST00000552656 PTPN5P54829 565 aa12.14□□□□□ -0.47
RNF41-211ENST00000552656 PPFIA1Q13136 1202 aa12.14□□□□□ -0.47
RNF41-211ENST00000552656 PCNX4Q63HM2 1172 aa12.14□□□□□ -0.47
RNF41-211ENST00000552656 TAF2Q6P1X5 1199 aa12.14□□□□□ -0.47
RNF41-211ENST00000552656 TSHZ1Q6ZSZ6 1077 aa12.14□□□□□ -0.47
RNF41-211ENST00000552656 SMC5Q8IY18 1101 aa12.14□□□□□ -0.47
RNF41-211ENST00000552656 CMTR2Q8IYT2 770 aaKnown RBP12.14□□□□□ -0.47
RNF41-211ENST00000552656 PCYT2Q99447 389 aa12.14□□□□□ -0.47
RNF41-211ENST00000552656 CNNM2Q9H8M5 875 aa12.14□□□□□ -0.47
RNF41-211ENST00000552656 DIAPH3Q9NSV4 1193 aa12.14□□□□□ -0.47
RNF41-211ENST00000552656 HCSTQ9UBK5 93 aa12.14□□□□□ -0.47
RNF41-211ENST00000552656 TUBE1Q9UJT0 475 aa12.14□□□□□ -0.47
RNF41-211ENST00000552656 DCHS1Q96JQ0 3298 aa12.14□□□□□ -0.47
RNF41-211ENST00000552656 PER2O15055 1255 aa12.13□□□□□ -0.47
RNF41-211ENST00000552656 ITGB5P18084 799 aa12.13□□□□□ -0.47
RNF41-211ENST00000552656 MRPS6P82932 125 aaKnown RBP12.13□□□□□ -0.47
RNF41-211ENST00000552656 TMEM62Q0P6H9 643 aa12.13□□□□□ -0.47
RNF41-211ENST00000552656 FBXL6Q8N531 539 aa12.13□□□□□ -0.47
RNF41-211ENST00000552656 TMX1Q9H3N1 280 aa12.13□□□□□ -0.47
RNF41-211ENST00000552656 MYO10Q9HD67 2058 aa12.12□□□□□ -0.47
RNF41-211ENST00000552656 EVPLQ92817 2033 aa12.12□□□□□ -0.47
RNF41-211ENST00000552656 ST18O60284 1047 aa12.12□□□□□ -0.47
RNF41-211ENST00000552656 MGEA5O60502 916 aa12.12□□□□□ -0.47
RNF41-211ENST00000552656 PPFIA3O75145 1194 aa12.12□□□□□ -0.47
RNF41-211ENST00000552656 PDGFBP01127 241 aaPredicted RBP12.12□□□□□ -0.47
RNF41-211ENST00000552656 IGHDP01880 384 aa12.12□□□□□ -0.47
RNF41-211ENST00000552656 CYP21A2P08686 494 aa12.12□□□□□ -0.47
RNF41-211ENST00000552656 ANTXR2P58335 489 aa12.12□□□□□ -0.47
RNF41-211ENST00000552656 IGBP1P78318 339 aa12.12□□□□□ -0.47
RNF41-211ENST00000552656 NAALADL2Q58DX5 795 aa12.12□□□□□ -0.47
RNF41-211ENST00000552656 NPAS4Q8IUM7 802 aa12.12□□□□□ -0.47
RNF41-211ENST00000552656 ATP8B4Q8TF62 1192 aa12.12□□□□□ -0.47
RNF41-211ENST00000552656 TRAPPC12Q8WVT3 735 aa12.12□□□□□ -0.47
RNF41-211ENST00000552656 SEPT1Q8WYJ6 367 aa12.12□□□□□ -0.47
RNF41-211ENST00000552656 SUSD6Q92537 303 aa12.12□□□□□ -0.47
RNF41-211ENST00000552656 RPGRIP1Q96KN7 1286 aa12.12□□□□□ -0.47
RNF41-211ENST00000552656 PHF7Q9BWX1 381 aaPredicted RBP12.12□□□□□ -0.47
RNF41-211ENST00000552656 FAM49AQ9H0Q0 323 aaPredicted RBP12.12□□□□□ -0.47
RNF41-211ENST00000552656 PKD2L1Q9P0L9 805 aa12.12□□□□□ -0.47
RNF41-211ENST00000552656 PADI3Q9ULW8 664 aa12.12□□□□□ -0.47
RNF41-211ENST00000552656 CACNA1HO95180 2353 aa12.12□□□□□ -0.47
RNF41-211ENST00000552656 ZFHX2Q9C0A1 2572 aaPredicted RBP12.11□□□□□ -0.47
RNF41-211ENST00000552656 PIK3CDO00329 1044 aa12.11□□□□□ -0.47
RNF41-211ENST00000552656 IFIT3O14879 490 aaKnown RBP12.11□□□□□ -0.47
RNF41-211ENST00000552656 INSRRP14616 1297 aa12.11□□□□□ -0.47
RNF41-211ENST00000552656 ERVFC1P60507 584 aa12.11□□□□□ -0.47
RNF41-211ENST00000552656 PTH1RQ03431 593 aa12.11□□□□□ -0.47
RNF41-211ENST00000552656 SIGLEC14Q08ET2 396 aa12.11□□□□□ -0.47
RNF41-211ENST00000552656 KCNC3Q14003 757 aa12.11□□□□□ -0.47
RNF41-211ENST00000552656 COL9A3Q14050 684 aaPredicted RBP12.11□□□□□ -0.47
RNF41-211ENST00000552656 RSPH3Q86UC2 560 aa12.11□□□□□ -0.47
RNF41-211ENST00000552656 CHD1LQ86WJ1 897 aa12.11□□□□□ -0.47
RNF41-211ENST00000552656 SUGP1Q8IWZ8 645 aaKnown RBP12.11□□□□□ -0.47
RNF41-211ENST00000552656 ERAP1Q9NZ08 941 aa12.11□□□□□ -0.47
RNF41-211ENST00000552656 IGSF9BQ9UPX0 1349 aa12.11□□□□□ -0.47
RNF41-211ENST00000552656 GFRA3O60609 400 aa12.1□□□□□ -0.47
RNF41-211ENST00000552656 SCG2P13521 617 aa12.1□□□□□ -0.47
RNF41-211ENST00000552656 AVPR2P30518 371 aa12.1□□□□□ -0.47
RNF41-211ENST00000552656 TRAF1Q13077 416 aa12.1□□□□□ -0.47
RNF41-211ENST00000552656 DUSP6Q16828 381 aa12.1□□□□□ -0.47
RNF41-211ENST00000552656 TMEM266Q2M3C6 531 aa12.1□□□□□ -0.47
RNF41-211ENST00000552656 NLRX1Q86UT6 975 aa12.1□□□□□ -0.47
RNF41-211ENST00000552656 SMARCC2Q8TAQ2 1214 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms