RNA–Protein interactions for RNA: ENST00000552620.1

CHMP4A-210, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 716 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-210ENST00000552620 SPATA1Q5VX52 437 aa6.76□□□□□ -1.33
CHMP4A-210ENST00000552620 SUSD4Q5VX71 490 aa6.76□□□□□ -1.33
CHMP4A-210ENST00000552620 JAKMIP3Q5VZ66 844 aa6.76□□□□□ -1.33
CHMP4A-210ENST00000552620 PSAPL1Q6NUJ1 521 aa6.76□□□□□ -1.33
CHMP4A-210ENST00000552620 CATIPQ7Z7H3 387 aa6.76□□□□□ -1.33
CHMP4A-210ENST00000552620 MCF2L2Q86YR7 1114 aa6.76□□□□□ -1.33
CHMP4A-210ENST00000552620 GOLM1Q8NBJ4 401 aa6.76□□□□□ -1.33
CHMP4A-210ENST00000552620 EMILIN2Q9BXX0 1053 aa6.76□□□□□ -1.33
CHMP4A-210ENST00000552620 MIR1-1HGQ9H1L0 117 aa6.76□□□□□ -1.33
CHMP4A-210ENST00000552620 RAI14Q9P0K7 980 aa6.76□□□□□ -1.33
CHMP4A-210ENST00000552620 LRP2BPQ9P2M1 347 aa6.76□□□□□ -1.33
CHMP4A-210ENST00000552620 KLF15Q9UIH9 416 aa6.76□□□□□ -1.33
CHMP4A-210ENST00000552620 GGA1Q9UJY5 639 aa6.76□□□□□ -1.33
CHMP4A-210ENST00000552620 STRIP2Q9ULQ0 834 aa6.76□□□□□ -1.33
CHMP4A-210ENST00000552620 KCNJ14Q9UNX9 436 aa6.76□□□□□ -1.33
CHMP4A-210ENST00000552620 TRIM33Q9UPN9 1127 aa6.76□□□□□ -1.33
CHMP4A-210ENST00000552620 TLR6Q9Y2C9 796 aa6.76□□□□□ -1.33
CHMP4A-210ENST00000552620 PPP2R2CQ9Y2T4 447 aa6.76□□□□□ -1.33
CHMP4A-210ENST00000552620 TIAM2Q8IVF5 1701 aa6.76□□□□□ -1.33
CHMP4A-210ENST00000552620 ANKRD36CQ5JPF3 1778 aa6.75□□□□□ -1.33
CHMP4A-210ENST00000552620 VWA3AA6NCI4 1184 aa6.75□□□□□ -1.33
CHMP4A-210ENST00000552620 TMEM232C9JQI7 657 aa6.75□□□□□ -1.33
CHMP4A-210ENST00000552620 PRKAB2O43741 272 aa6.75□□□□□ -1.33
CHMP4A-210ENST00000552620 TADA3O75528 432 aa6.75□□□□□ -1.33
CHMP4A-210ENST00000552620 DDAH1O94760 285 aa6.75□□□□□ -1.33
CHMP4A-210ENST00000552620 URI1O94763 535 aaPredicted RBP6.75□□□□□ -1.33
CHMP4A-210ENST00000552620 ZRANB2O95218 330 aaKnown RBP eCLIP6.75□□□□□ -1.33
CHMP4A-210ENST00000552620 CYP7A1P22680 504 aa6.75□□□□□ -1.33
CHMP4A-210ENST00000552620 ZNF157P51786 506 aaPredicted RBP6.75□□□□□ -1.33
CHMP4A-210ENST00000552620 GNG11P61952 73 aa6.75□□□□□ -1.33
CHMP4A-210ENST00000552620 IKBKEQ14164 716 aa6.75□□□□□ -1.33
CHMP4A-210ENST00000552620 TERF2Q15554 542 aa6.75□□□□□ -1.33
CHMP4A-210ENST00000552620 ERCC6LQ2NKX8 1250 aa6.75□□□□□ -1.33
CHMP4A-210ENST00000552620 ARHGAP29Q52LW3 1261 aa6.75□□□□□ -1.33
CHMP4A-210ENST00000552620 RRP12Q5JTH9 1297 aaKnown RBP6.75□□□□□ -1.33
CHMP4A-210ENST00000552620 GDF6Q6KF10 455 aaPredicted RBP6.75□□□□□ -1.33
CHMP4A-210ENST00000552620 FBXL19Q6PCT2 694 aa6.75□□□□□ -1.33
CHMP4A-210ENST00000552620 TMCO3Q6UWJ1 677 aa6.75□□□□□ -1.33
CHMP4A-210ENST00000552620 SLCO4C1Q6ZQN7 724 aa6.75□□□□□ -1.33
CHMP4A-210ENST00000552620 ZNF771Q7L3S4 317 aaPredicted RBP6.75□□□□□ -1.33
CHMP4A-210ENST00000552620 VN1R5Q7Z5H4 357 aa6.75□□□□□ -1.33
CHMP4A-210ENST00000552620 CCDC84Q86UT8 332 aaPredicted RBP6.75□□□□□ -1.33
CHMP4A-210ENST00000552620 PPFIBP1Q86W92 1011 aa6.75□□□□□ -1.33
CHMP4A-210ENST00000552620 TMEM139Q8IV31 216 aa6.75□□□□□ -1.33
CHMP4A-210ENST00000552620 LCORLQ8N3X6 602 aa6.75□□□□□ -1.33
CHMP4A-210ENST00000552620 GPR161Q8N6U8 529 aaKnown RBP6.75□□□□□ -1.33
CHMP4A-210ENST00000552620 TC2NQ8N9U0 490 aa6.75□□□□□ -1.33
CHMP4A-210ENST00000552620 EAF1Q96JC9 268 aaPredicted RBP6.75□□□□□ -1.33
CHMP4A-210ENST00000552620 MYL10Q9BUA6 226 aa6.75□□□□□ -1.33
CHMP4A-210ENST00000552620 PHF20Q9BVI0 1012 aa6.75□□□□□ -1.33
CHMP4A-210ENST00000552620 BRIP1Q9BX63 1249 aa6.75□□□□□ -1.33
CHMP4A-210ENST00000552620 CSRNP2Q9H175 543 aa6.75□□□□□ -1.33
CHMP4A-210ENST00000552620 CABP5Q9NP86 173 aa6.75□□□□□ -1.33
CHMP4A-210ENST00000552620 INCENPQ9NQS7 918 aa6.75□□□□□ -1.33
CHMP4A-210ENST00000552620 TOMM22Q9NS69 142 aa6.75□□□□□ -1.33
CHMP4A-210ENST00000552620 INTS13Q9NVM9 706 aa6.75□□□□□ -1.33
CHMP4A-210ENST00000552620 CYP8B1Q9UNU6 501 aa6.75□□□□□ -1.33
CHMP4A-210ENST00000552620 PCDHB6Q9Y5E3 794 aa6.75□□□□□ -1.33
CHMP4A-210ENST00000552620 TACC3Q9Y6A5 838 aa6.75□□□□□ -1.33
CHMP4A-210ENST00000552620 ARAP2Q8WZ64 1704 aa6.75□□□□□ -1.33
CHMP4A-210ENST00000552620 TOGARAM1Q9Y4F4 1720 aa6.75□□□□□ -1.33
CHMP4A-210ENST00000552620 LRP5O75197 1615 aa6.75□□□□□ -1.33
CHMP4A-210ENST00000552620 DISP2A7MBM2 1401 aa6.75□□□□□ -1.33
CHMP4A-210ENST00000552620 ITIH6Q6UXX5 1313 aa6.75□□□□□ -1.33
CHMP4A-210ENST00000552620 NUP98P52948 1817 aa6.74□□□□□ -1.33
CHMP4A-210ENST00000552620 DOCK2Q92608 1830 aa6.74□□□□□ -1.33
CHMP4A-210ENST00000552620 LRRC10BA6NIK2 292 aa6.74□□□□□ -1.33
CHMP4A-210ENST00000552620 FOXN1O15353 648 aa6.74□□□□□ -1.33
CHMP4A-210ENST00000552620 GREM1O60565 184 aa6.74□□□□□ -1.33
CHMP4A-210ENST00000552620 PAGE1O75459 146 aa6.74□□□□□ -1.33
CHMP4A-210ENST00000552620 CAMTA2O94983 1202 aa6.74□□□□□ -1.33
CHMP4A-210ENST00000552620 TUBBP07437 444 aa6.74□□□□□ -1.33
CHMP4A-210ENST00000552620 CCDC175P0C221 793 aa6.74□□□□□ -1.33
CHMP4A-210ENST00000552620 ESRRAP11474 423 aaPredicted RBP6.74□□□□□ -1.33
CHMP4A-210ENST00000552620 TFE3P19532 575 aaPredicted RBP6.74□□□□□ -1.33
CHMP4A-210ENST00000552620 SPAG1Q07617 926 aa6.74□□□□□ -1.33
CHMP4A-210ENST00000552620 TRIM14Q14142 442 aa6.74□□□□□ -1.33
CHMP4A-210ENST00000552620 SF3B3Q15393 1217 aaKnown RBP6.74□□□□□ -1.33
CHMP4A-210ENST00000552620 PKN1Q16512 942 aa6.74□□□□□ -1.33
CHMP4A-210ENST00000552620 TEX35Q5T0J7 233 aa6.74□□□□□ -1.33
CHMP4A-210ENST00000552620 IFIT1BQ5T764 474 aaKnown RBP6.74□□□□□ -1.33
CHMP4A-210ENST00000552620 FAM117BQ6P1L5 589 aa6.74□□□□□ -1.33
CHMP4A-210ENST00000552620 INTS5Q6P9B9 1019 aaKnown RBP6.74□□□□□ -1.33
CHMP4A-210ENST00000552620 DPH6Q7L8W6 267 aa6.74□□□□□ -1.33
CHMP4A-210ENST00000552620 IQCA1Q86XH1 822 aa6.74□□□□□ -1.33
CHMP4A-210ENST00000552620 SULF2Q8IWU5 870 aa6.74□□□□□ -1.33
CHMP4A-210ENST00000552620 TRIM42Q8IWZ5 723 aa6.74□□□□□ -1.33
CHMP4A-210ENST00000552620 FAM177A1Q8N128 213 aaPredicted RBP6.74□□□□□ -1.33
CHMP4A-210ENST00000552620 PDILTQ8N807 584 aa6.74□□□□□ -1.33
CHMP4A-210ENST00000552620 IQUBQ8NA54 791 aa6.74□□□□□ -1.33
CHMP4A-210ENST00000552620 ANKRD20A12PQ8NF67 263 aa6.74□□□□□ -1.33
CHMP4A-210ENST00000552620 NUP133Q8WUM0 1156 aa6.74□□□□□ -1.33
CHMP4A-210ENST00000552620 RABGGTAQ92696 567 aa6.74□□□□□ -1.33
CHMP4A-210ENST00000552620 PAGE5Q96GU1 130 aa6.74□□□□□ -1.33
CHMP4A-210ENST00000552620 MDFIQ99750 246 aa6.74□□□□□ -1.33
CHMP4A-210ENST00000552620 CARD6Q9BX69 1037 aa6.74□□□□□ -1.33
CHMP4A-210ENST00000552620 RMND1Q9NWS8 449 aa6.74□□□□□ -1.33
CHMP4A-210ENST00000552620 BTG4Q9NY30 223 aa6.74□□□□□ -1.33
CHMP4A-210ENST00000552620 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.74□□□□□ -1.33
CHMP4A-210ENST00000552620 EFR3BQ9Y2G0 817 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms