RNA–Protein interactions for RNA: ENST00000552422.5

CNOT2-238, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 3

Gene CNOT2, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-238	ENST00000552422	SH2D4A	Q9H788	454 aa		7.85	□□□□□ -1.15
CNOT2-238	ENST00000552422	ZFYVE28	Q9HCC9	887 aa		7.85	□□□□□ -1.15
CNOT2-238	ENST00000552422	TMOD4	Q9NZQ9	345 aa		7.85	□□□□□ -1.15
CNOT2-238	ENST00000552422	CTNNA3	Q9UI47	895 aa		7.85	□□□□□ -1.15
CNOT2-238	ENST00000552422	ZNF236	Q9UL36	1845 aa		7.85	□□□□□ -1.15
CNOT2-238	ENST00000552422	NEDD4	P46934	1319 aa		7.84	□□□□□ -1.15
CNOT2-238	ENST00000552422	DNAH12	Q6ZR08	3092 aa		7.84	□□□□□ -1.15
CNOT2-238	ENST00000552422	ZNF213	O14771	459 aa		7.84	□□□□□ -1.15
CNOT2-238	ENST00000552422	DDX3Y	O15523	660 aa	Known RBP	7.84	□□□□□ -1.15
CNOT2-238	ENST00000552422	CDC45	O75419	566 aa		7.84	□□□□□ -1.15
CNOT2-238	ENST00000552422	TSPY3	P0CV98	308 aa		7.84	□□□□□ -1.15
CNOT2-238	ENST00000552422	TSPY8	P0CW00	308 aa		7.84	□□□□□ -1.15
CNOT2-238	ENST00000552422	CYP2C8	P10632	490 aa		7.84	□□□□□ -1.15
CNOT2-238	ENST00000552422	EEF2	P13639	858 aa	Known RBP	7.84	□□□□□ -1.15
CNOT2-238	ENST00000552422	HOXA7	P31268	230 aa	Predicted RBP	7.84	□□□□□ -1.15
CNOT2-238	ENST00000552422	PTH1R	Q03431	593 aa		7.84	□□□□□ -1.15
CNOT2-238	ENST00000552422	PABPC4	Q13310	644 aa	Known RBP eCLIP	7.84	□□□□□ -1.15
CNOT2-238	ENST00000552422	ZYX	Q15942	572 aa	Known RBP	7.84	□□□□□ -1.15
CNOT2-238	ENST00000552422	IMMT	Q16891	758 aa	Known RBP	7.84	□□□□□ -1.15
CNOT2-238	ENST00000552422	AKNAD1	Q5T1N1	836 aa		7.84	□□□□□ -1.15
CNOT2-238	ENST00000552422		Q6ZS46	218 aa		7.84	□□□□□ -1.15
CNOT2-238	ENST00000552422	MFSD6	Q6ZSS7	791 aa		7.84	□□□□□ -1.15
CNOT2-238	ENST00000552422	SMCR8	Q8TEV9	937 aa	Predicted RBP	7.84	□□□□□ -1.15
CNOT2-238	ENST00000552422	LPAR1	Q92633	364 aa		7.84	□□□□□ -1.15
CNOT2-238	ENST00000552422	WNT8B	Q93098	351 aa		7.84	□□□□□ -1.15
CNOT2-238	ENST00000552422	CEP95	Q96GE4	821 aa		7.84	□□□□□ -1.15
CNOT2-238	ENST00000552422	ASCC2	Q9H1I8	757 aa	Predicted RBP	7.84	□□□□□ -1.15
CNOT2-238	ENST00000552422	RNF41	Q9H4P4	317 aa	Predicted RBP	7.84	□□□□□ -1.15
CNOT2-238	ENST00000552422	INCENP	Q9NQS7	918 aa		7.84	□□□□□ -1.15
CNOT2-238	ENST00000552422	MTMR4	Q9NYA4	1195 aa		7.84	□□□□□ -1.15
CNOT2-238	ENST00000552422	NYAP2	Q9P242	653 aa		7.84	□□□□□ -1.15
CNOT2-238	ENST00000552422	BRPF3	Q9ULD4	1205 aa		7.84	□□□□□ -1.15
CNOT2-238	ENST00000552422	SYNPO2	Q9UMS6	1093 aa		7.84	□□□□□ -1.15
CNOT2-238	ENST00000552422	TMX2	Q9Y320	296 aa		7.84	□□□□□ -1.15
CNOT2-238	ENST00000552422	FRMPD3	Q5JV73	1810 aa		7.83	□□□□□ -1.16
CNOT2-238	ENST00000552422	TSPY2	A6NKD2	308 aa		7.83	□□□□□ -1.16
CNOT2-238	ENST00000552422	RANBP6	O60518	1105 aa	Known RBP	7.83	□□□□□ -1.16
CNOT2-238	ENST00000552422	FKTN	O75072	461 aa		7.83	□□□□□ -1.16
CNOT2-238	ENST00000552422	TTLL1	O95922	423 aa		7.83	□□□□□ -1.16
CNOT2-238	ENST00000552422	NT5C2	P49902	561 aa		7.83	□□□□□ -1.16
CNOT2-238	ENST00000552422	TFAP4	Q01664	338 aa		7.83	□□□□□ -1.16
CNOT2-238	ENST00000552422	FAM47A	Q5JRC9	791 aa		7.83	□□□□□ -1.16
CNOT2-238	ENST00000552422	KIAA1755	Q5JYT7	1200 aa		7.83	□□□□□ -1.16
CNOT2-238	ENST00000552422	CASC1	Q6TDU7	716 aa		7.83	□□□□□ -1.16
CNOT2-238	ENST00000552422	C17orf99	Q6UX52	265 aa		7.83	□□□□□ -1.16
CNOT2-238	ENST00000552422	RETREG2	Q8NC44	543 aa		7.83	□□□□□ -1.16
CNOT2-238	ENST00000552422	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	7.83	□□□□□ -1.16
CNOT2-238	ENST00000552422	MAP4K1	Q92918	833 aa		7.83	□□□□□ -1.16
CNOT2-238	ENST00000552422	CEP41	Q9BYV8	373 aa		7.83	□□□□□ -1.16
CNOT2-238	ENST00000552422	LSG1	Q9H089	658 aa	Known RBP	7.83	□□□□□ -1.16
CNOT2-238	ENST00000552422	VCPKMT	Q9H867	229 aa		7.83	□□□□□ -1.16
CNOT2-238	ENST00000552422	OSGEP	Q9NPF4	335 aa		7.83	□□□□□ -1.16
CNOT2-238	ENST00000552422	IL17RB	Q9NRM6	502 aa		7.83	□□□□□ -1.16
CNOT2-238	ENST00000552422	TOMM22	Q9NS69	142 aa		7.83	□□□□□ -1.16
CNOT2-238	ENST00000552422	LCT	P09848	1927 aa		7.83	□□□□□ -1.16
CNOT2-238	ENST00000552422	TM4SF5	O14894	197 aa		7.82	□□□□□ -1.16
CNOT2-238	ENST00000552422	WDR46	O15213	610 aa	Known RBP	7.82	□□□□□ -1.16
CNOT2-238	ENST00000552422	NMT2	O60551	498 aa		7.82	□□□□□ -1.16
CNOT2-238	ENST00000552422	ADAM11	O75078	769 aa		7.82	□□□□□ -1.16
CNOT2-238	ENST00000552422	CYP21A2	P08686	494 aa		7.82	□□□□□ -1.16
CNOT2-238	ENST00000552422	GCLC	P48506	637 aa	Predicted RBP	7.82	□□□□□ -1.16
CNOT2-238	ENST00000552422	NOV	P48745	357 aa		7.82	□□□□□ -1.16
CNOT2-238	ENST00000552422	ARL4D	P49703	201 aa		7.82	□□□□□ -1.16
CNOT2-238	ENST00000552422	HERVK_113	P62684	666 aa		7.82	□□□□□ -1.16
CNOT2-238	ENST00000552422	IRX3	P78415	501 aa	Predicted RBP	7.82	□□□□□ -1.16
CNOT2-238	ENST00000552422	LACTB	P83111	547 aa	Predicted RBP	7.82	□□□□□ -1.16
CNOT2-238	ENST00000552422	CAP1	Q01518	475 aa		7.82	□□□□□ -1.16
CNOT2-238	ENST00000552422	ATP2B2	Q01814	1243 aa		7.82	□□□□□ -1.16
CNOT2-238	ENST00000552422	SP3	Q02447	781 aa		7.82	□□□□□ -1.16
CNOT2-238	ENST00000552422	PDE4C	Q08493	712 aa		7.82	□□□□□ -1.16
CNOT2-238	ENST00000552422	FAM110C	Q1W6H9	321 aa		7.82	□□□□□ -1.16
CNOT2-238	ENST00000552422	RRP12	Q5JTH9	1297 aa	Known RBP	7.82	□□□□□ -1.16
CNOT2-238	ENST00000552422	LBX2	Q6XYB7	198 aa		7.82	□□□□□ -1.16
CNOT2-238	ENST00000552422	KIAA1211	Q6ZU35	1233 aa		7.82	□□□□□ -1.16
CNOT2-238	ENST00000552422	SPICE1	Q8N0Z3	855 aa		7.82	□□□□□ -1.16
CNOT2-238	ENST00000552422	ASAP3	Q8TDY4	903 aa		7.82	□□□□□ -1.16
CNOT2-238	ENST00000552422	UBASH3B	Q8TF42	649 aa		7.82	□□□□□ -1.16
CNOT2-238	ENST00000552422	BSND	Q8WZ55	320 aa		7.82	□□□□□ -1.16
CNOT2-238	ENST00000552422	ESR2	Q92731	530 aa		7.82	□□□□□ -1.16
CNOT2-238	ENST00000552422	MKL1	Q969V6	931 aa		7.82	□□□□□ -1.16
CNOT2-238	ENST00000552422	NXPE3	Q969Y0	559 aa		7.82	□□□□□ -1.16
CNOT2-238	ENST00000552422	RPAP3	Q9H6T3	665 aa	Predicted RBP	7.82	□□□□□ -1.16
CNOT2-238	ENST00000552422	CNNM2	Q9H8M5	875 aa		7.82	□□□□□ -1.16
CNOT2-238	ENST00000552422	LATS2	Q9NRM7	1088 aa		7.82	□□□□□ -1.16
CNOT2-238	ENST00000552422	TCP11L1	Q9NUJ3	509 aa		7.82	□□□□□ -1.16
CNOT2-238	ENST00000552422	CPA4	Q9UI42	421 aa		7.82	□□□□□ -1.16
CNOT2-238	ENST00000552422	SOX13	Q9UN79	622 aa		7.82	□□□□□ -1.16
CNOT2-238	ENST00000552422	RBM8A	Q9Y5S9	174 aa	Known RBP	7.82	□□□□□ -1.16
CNOT2-238	ENST00000552422		B4E1Z4	1266 aa		7.81	□□□□□ -1.16
CNOT2-238	ENST00000552422	NLRP12	P59046	1061 aa		7.81	□□□□□ -1.16
CNOT2-238	ENST00000552422	CATSPERG	Q6ZRH7	1159 aa		7.81	□□□□□ -1.16
CNOT2-238	ENST00000552422	LRRC47	Q8N1G4	583 aa	Known RBP	7.81	□□□□□ -1.16
CNOT2-238	ENST00000552422	GMCL1P1	Q8NEA9	526 aa		7.81	□□□□□ -1.16
CNOT2-238	ENST00000552422	ERO1A	Q96HE7	468 aa		7.81	□□□□□ -1.16
CNOT2-238	ENST00000552422	UBL7	Q96S82	380 aa	Predicted RBP	7.81	□□□□□ -1.16
CNOT2-238	ENST00000552422	KRT23	Q9C075	422 aa		7.81	□□□□□ -1.16
CNOT2-238	ENST00000552422	TANGO6	Q9C0B7	1094 aa		7.81	□□□□□ -1.16
CNOT2-238	ENST00000552422	MORF4L1	Q9UBU8	362 aa		7.81	□□□□□ -1.16
CNOT2-238	ENST00000552422	CLIP2	Q9UDT6	1046 aa		7.81	□□□□□ -1.16
CNOT2-238	ENST00000552422	STX8	Q9UNK0	236 aa		7.81	□□□□□ -1.16

Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms