RNA–Protein interactions for RNA: ENST00000552215.5

CHPT1-208, Transcript of choline phosphotransferase 1, humanhuman

TSL 1 (best)

Gene CHPT1, Length 4,342 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-208ENST00000552215 ZFYVE27Q5T4F4 411 aa9.05□□□□□ -0.96
CHPT1-208ENST00000552215 THNSL1Q8IYQ7 743 aa9.05□□□□□ -0.96
CHPT1-208ENST00000552215 GLIS3Q8NEA6 775 aa9.05□□□□□ -0.96
CHPT1-208ENST00000552215 PRDM5Q9NQX1 630 aaPredicted RBP9.05□□□□□ -0.96
CHPT1-208ENST00000552215 NRBP2Q9NSY0 501 aa9.05□□□□□ -0.96
CHPT1-208ENST00000552215 EIF3JO75822 258 aaKnown RBP9.04□□□□□ -0.96
CHPT1-208ENST00000552215 FGFR4P22455 802 aa9.04□□□□□ -0.96
CHPT1-208ENST00000552215 FCGRTP55899 365 aa9.04□□□□□ -0.96
CHPT1-208ENST00000552215 PAK1Q13153 545 aa9.04□□□□□ -0.96
CHPT1-208ENST00000552215 HSDL1Q3SXM5 330 aa9.04□□□□□ -0.96
CHPT1-208ENST00000552215 CXCL17Q6UXB2 119 aa9.04□□□□□ -0.96
CHPT1-208ENST00000552215 CCDC186Q7Z3E2 898 aa9.04□□□□□ -0.96
CHPT1-208ENST00000552215 RASAL3Q86YV0 1011 aa9.04□□□□□ -0.96
CHPT1-208ENST00000552215 GCLCP48506 637 aaPredicted RBP9.04□□□□□ -0.96
CHPT1-208ENST00000552215 NLRP12P59046 1061 aa9.04□□□□□ -0.96
CHPT1-208ENST00000552215 PRKCEQ02156 737 aa9.04□□□□□ -0.96
CHPT1-208ENST00000552215 PRKCZQ05513 592 aa9.04□□□□□ -0.96
CHPT1-208ENST00000552215 SPAG1Q07617 926 aa9.04□□□□□ -0.96
CHPT1-208ENST00000552215 STK4Q13043 487 aa9.04□□□□□ -0.96
CHPT1-208ENST00000552215 RAPGEF1Q13905 1077 aa9.04□□□□□ -0.96
CHPT1-208ENST00000552215 CCDC144BQ3MJ40 725 aa9.04□□□□□ -0.96
CHPT1-208ENST00000552215 MFSD14CQ5VZR4 134 aa9.04□□□□□ -0.96
CHPT1-208ENST00000552215 IFNL1Q8IU54 200 aa9.04□□□□□ -0.96
CHPT1-208ENST00000552215 FAM84AQ96KN4 292 aa9.04□□□□□ -0.96
CHPT1-208ENST00000552215 FAM20AQ96MK3 541 aa9.04□□□□□ -0.96
CHPT1-208ENST00000552215 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.04□□□□□ -0.96
CHPT1-208ENST00000552215 NLRC4Q9NPP4 1024 aa9.04□□□□□ -0.96
CHPT1-208ENST00000552215 FAM207AQ9NSI2 230 aaPredicted RBP9.04□□□□□ -0.96
CHPT1-208ENST00000552215 SYNRGQ9UMZ2 1314 aa9.04□□□□□ -0.96
CHPT1-208ENST00000552215 OPLAHO14841 1288 aa9.04□□□□□ -0.96
CHPT1-208ENST00000552215 GTPBP6O43824 516 aaPredicted RBP9.04□□□□□ -0.96
CHPT1-208ENST00000552215 TRIM21P19474 475 aaKnown RBP9.04□□□□□ -0.96
CHPT1-208ENST00000552215 MMP14P50281 582 aa9.04□□□□□ -0.96
CHPT1-208ENST00000552215 DNM2P50570 870 aa9.04□□□□□ -0.96
CHPT1-208ENST00000552215 MYL5Q02045 173 aa9.04□□□□□ -0.96
CHPT1-208ENST00000552215 SNW1Q13573 536 aaKnown RBP9.04□□□□□ -0.96
CHPT1-208ENST00000552215 ECM1Q16610 540 aa9.04□□□□□ -0.96
CHPT1-208ENST00000552215 TDRD12Q587J7 1177 aaKnown RBP9.04□□□□□ -0.96
CHPT1-208ENST00000552215 ARL6IP4Q66PJ3 421 aaKnown RBP9.04□□□□□ -0.96
CHPT1-208ENST00000552215 RUSC1Q9BVN2 902 aa9.04□□□□□ -0.96
CHPT1-208ENST00000552215 DEF6Q9H4E7 631 aa9.04□□□□□ -0.96
CHPT1-208ENST00000552215 KMT5AQ9NQR1 393 aa9.04□□□□□ -0.96
CHPT1-208ENST00000552215 ZNF112Q9UJU3 913 aa9.04□□□□□ -0.96
CHPT1-208ENST00000552215 SOWAHBA6NEL2 793 aa9.04□□□□□ -0.96
CHPT1-208ENST00000552215 ASB14A6NK59 587 aa9.04□□□□□ -0.96
CHPT1-208ENST00000552215 MYBP10242 640 aa9.04□□□□□ -0.96
CHPT1-208ENST00000552215 STRN3Q13033 797 aa9.04□□□□□ -0.96
CHPT1-208ENST00000552215 CNNM4Q6P4Q7 775 aa9.04□□□□□ -0.96
CHPT1-208ENST00000552215 MYOCDQ8IZQ8 938 aa9.04□□□□□ -0.96
CHPT1-208ENST00000552215 SAAL1Q96ER3 474 aa9.04□□□□□ -0.96
CHPT1-208ENST00000552215 CDHR1Q96JP9 859 aa9.04□□□□□ -0.96
CHPT1-208ENST00000552215 TBC1D22BQ9NU19 505 aa9.04□□□□□ -0.96
CHPT1-208ENST00000552215 SETD4Q9NVD3 440 aa9.04□□□□□ -0.96
CHPT1-208ENST00000552215 ADAMTSL1Q8N6G6 1762 aa9.03□□□□□ -0.96
CHPT1-208ENST00000552215 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.03□□□□□ -0.96
CHPT1-208ENST00000552215 ESYT2A0FGR8 921 aa9.03□□□□□ -0.96
CHPT1-208ENST00000552215 KIF3CO14782 793 aa9.03□□□□□ -0.96
CHPT1-208ENST00000552215 HIP1RO75146 1068 aa9.03□□□□□ -0.96
CHPT1-208ENST00000552215 CAPN15O75808 1086 aa9.03□□□□□ -0.96
CHPT1-208ENST00000552215 P4HBP07237 508 aaKnown RBP9.03□□□□□ -0.96
CHPT1-208ENST00000552215 PRCPP42785 496 aa9.03□□□□□ -0.96
CHPT1-208ENST00000552215 GRB10Q13322 594 aa9.03□□□□□ -0.96
CHPT1-208ENST00000552215 ITGB3BPQ13352 177 aaPredicted RBP9.03□□□□□ -0.96
CHPT1-208ENST00000552215 NEDD9Q14511 834 aa9.03□□□□□ -0.96
CHPT1-208ENST00000552215 FAM160B1Q5W0V3 765 aa9.03□□□□□ -0.96
CHPT1-208ENST00000552215 BTNL9Q6UXG8 535 aa9.03□□□□□ -0.96
CHPT1-208ENST00000552215 RIOX2Q8IUF8 465 aa9.03□□□□□ -0.96
CHPT1-208ENST00000552215 SCFD2Q8WU76 684 aa9.03□□□□□ -0.96
CHPT1-208ENST00000552215 POMGNT1Q8WZA1 660 aa9.03□□□□□ -0.96
CHPT1-208ENST00000552215 ZBTB9Q96C00 473 aa9.03□□□□□ -0.96
CHPT1-208ENST00000552215 MROH8Q9H579 483 aa9.03□□□□□ -0.96
CHPT1-208ENST00000552215 LARSQ9P2J5 1176 aaKnown RBP9.03□□□□□ -0.96
CHPT1-208ENST00000552215 SMARCA1P28370 1054 aa9.03□□□□□ -0.96
CHPT1-208ENST00000552215 TRIM32Q13049 653 aa9.03□□□□□ -0.96
CHPT1-208ENST00000552215 DMP1Q13316 513 aaPredicted RBP9.03□□□□□ -0.96
CHPT1-208ENST00000552215 RAD54LQ92698 747 aa9.03□□□□□ -0.96
CHPT1-208ENST00000552215 REEP2Q9BRK0 252 aa9.03□□□□□ -0.96
CHPT1-208ENST00000552215 NOC4LQ9BVI4 516 aaKnown RBP9.03□□□□□ -0.96
CHPT1-208ENST00000552215 RNF208Q9H0X6 261 aa9.03□□□□□ -0.96
CHPT1-208ENST00000552215 GABRQQ9UN88 632 aa9.03□□□□□ -0.96
CHPT1-208ENST00000552215 TUBGCP6Q96RT7 1819 aa9.03□□□□□ -0.96
CHPT1-208ENST00000552215 VTNP04004 478 aa9.03□□□□□ -0.96
CHPT1-208ENST00000552215 FDX1P10109 184 aa9.03□□□□□ -0.96
CHPT1-208ENST00000552215 UBA1P22314 1058 aaKnown RBP9.03□□□□□ -0.96
CHPT1-208ENST00000552215 LIG4P49917 911 aa9.03□□□□□ -0.96
CHPT1-208ENST00000552215 MKRN4PQ13434 485 aaPredicted RBP9.03□□□□□ -0.96
CHPT1-208ENST00000552215 FKBP15Q5T1M5 1219 aa9.03□□□□□ -0.96
CHPT1-208ENST00000552215 LDLRAD1Q5T700 205 aa9.03□□□□□ -0.96
CHPT1-208ENST00000552215 VSIG10LQ86VR7 867 aa9.03□□□□□ -0.96
CHPT1-208ENST00000552215 C7orf31Q8N865 590 aa9.03□□□□□ -0.96
CHPT1-208ENST00000552215 RNF149Q8NC42 400 aa9.03□□□□□ -0.96
CHPT1-208ENST00000552215 SEPT1Q8WYJ6 367 aa9.03□□□□□ -0.96
CHPT1-208ENST00000552215 JADE2Q9NQC1 790 aa9.03□□□□□ -0.96
CHPT1-208ENST00000552215 NRBP1Q9UHY1 535 aa9.03□□□□□ -0.96
CHPT1-208ENST00000552215 KDM3AQ9Y4C1 1321 aa9.03□□□□□ -0.96
CHPT1-208ENST00000552215 MYH1P12882 1939 aa9.02□□□□□ -0.96
CHPT1-208ENST00000552215 TNNI1P19237 187 aa9.02□□□□□ -0.96
CHPT1-208ENST00000552215 COPB2P35606 906 aa9.02□□□□□ -0.96
CHPT1-208ENST00000552215 SETQ01105 290 aaPredicted RBP9.02□□□□□ -0.96
CHPT1-208ENST00000552215 KRT76Q01546 638 aa9.02□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms