RNA–Protein interactions for RNA: ENST00000551634.5

NPAS3-211, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 5

Gene NPAS3, Length 2,718 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-211ENST00000551634 SUGP1Q8IWZ8 645 aaKnown RBP25.9■■□□□ 1.74
NPAS3-211ENST00000551634 ACTRT1Q8TDG2 376 aa25.9■■□□□ 1.74
NPAS3-211ENST00000551634 SCFD2Q8WU76 684 aa25.9■■□□□ 1.74
NPAS3-211ENST00000551634 PACSIN2Q9UNF0 486 aaPredicted RBP25.9■■□□□ 1.74
NPAS3-211ENST00000551634 KIF4AO95239 1232 aa25.89■■□□□ 1.74
NPAS3-211ENST00000551634 LSP1P33241 339 aa25.89■■□□□ 1.74
NPAS3-211ENST00000551634 RNPC3Q96LT9 517 aaKnown RBP25.89■■□□□ 1.74
NPAS3-211ENST00000551634 KCNMB3Q9NPA1 279 aa25.89■■□□□ 1.74
NPAS3-211ENST00000551634 TRAF3IP3Q9Y228 551 aa25.89■■□□□ 1.74
NPAS3-211ENST00000551634 INPP5BP32019 993 aa25.89■■□□□ 1.73
NPAS3-211ENST00000551634 HDAC9Q9UKV0 1011 aa25.89■■□□□ 1.73
NPAS3-211ENST00000551634 KIF13BQ9NQT8 1826 aa25.89■■□□□ 1.73
NPAS3-211ENST00000551634 POTEB3A0JP26 581 aa25.88■■□□□ 1.73
NPAS3-211ENST00000551634 POTECB2RU33 542 aa25.88■■□□□ 1.73
NPAS3-211ENST00000551634 ATP1A2P50993 1020 aa25.88■■□□□ 1.73
NPAS3-211ENST00000551634 PTK2Q05397 1052 aa25.88■■□□□ 1.73
NPAS3-211ENST00000551634 DPY19L2P1Q6NXN4 242 aa25.88■■□□□ 1.73
NPAS3-211ENST00000551634 POTEBQ6S5H4 581 aa25.88■■□□□ 1.73
NPAS3-211ENST00000551634 MMS22LQ6ZRQ5 1243 aa25.88■■□□□ 1.73
NPAS3-211ENST00000551634 RPGRQ92834 1020 aaKnown RBP25.88■■□□□ 1.73
NPAS3-211ENST00000551634 DAGLAQ9Y4D2 1042 aa25.88■■□□□ 1.73
NPAS3-211ENST00000551634 KCNK3O14649 394 aa25.88■■□□□ 1.73
NPAS3-211ENST00000551634 NR2F2P24468 414 aa25.88■■□□□ 1.73
NPAS3-211ENST00000551634 PRKCIP41743 596 aa25.88■■□□□ 1.73
NPAS3-211ENST00000551634 LIG3P49916 1009 aa25.88■■□□□ 1.73
NPAS3-211ENST00000551634 GJA10Q969M2 543 aa25.88■■□□□ 1.73
NPAS3-211ENST00000551634 SPAG5Q96R06 1193 aa25.88■■□□□ 1.73
NPAS3-211ENST00000551634 KANSL2Q9H9L4 492 aa25.88■■□□□ 1.73
NPAS3-211ENST00000551634 CYP3A7-CYP3A51PA0A087WV96 503 aa25.87■■□□□ 1.73
NPAS3-211ENST00000551634 CYP3A7P24462 503 aa25.87■■□□□ 1.73
NPAS3-211ENST00000551634 SLC12A3P55017 1021 aa25.87■■□□□ 1.73
NPAS3-211ENST00000551634 SLFN12Q8IYM2 578 aa25.87■■□□□ 1.73
NPAS3-211ENST00000551634 MBOAT7Q96N66 472 aa25.87■■□□□ 1.73
NPAS3-211ENST00000551634 DHX36Q9H2U1 1008 aaKnown RBP25.87■■□□□ 1.73
NPAS3-211ENST00000551634 RABEP2Q9H5N1 569 aa25.87■■□□□ 1.73
NPAS3-211ENST00000551634 ARMCX3Q9UH62 379 aaPredicted RBP25.87■■□□□ 1.73
NPAS3-211ENST00000551634 CCNL1Q9UK58 526 aaPredicted RBP25.87■■□□□ 1.73
NPAS3-211ENST00000551634 ARFGEF1Q9Y6D6 1849 aa25.87■■□□□ 1.73
NPAS3-211ENST00000551634 PPP1R37O75864 691 aa25.87■■□□□ 1.73
NPAS3-211ENST00000551634 KRT18P05783 430 aaKnown RBP25.87■■□□□ 1.73
NPAS3-211ENST00000551634 UCHL3P15374 230 aa25.87■■□□□ 1.73
NPAS3-211ENST00000551634 RFC4P35249 363 aa25.87■■□□□ 1.73
NPAS3-211ENST00000551634 EIF6P56537 245 aaKnown RBP25.87■■□□□ 1.73
NPAS3-211ENST00000551634 MOXD1Q6UVY6 613 aa25.87■■□□□ 1.73
NPAS3-211ENST00000551634 MICALCLQ6ZW33 695 aa25.87■■□□□ 1.73
NPAS3-211ENST00000551634 ZNF571Q7Z3V5 609 aaPredicted RBP25.87■■□□□ 1.73
NPAS3-211ENST00000551634 LRRC57Q8N9N7 239 aa25.87■■□□□ 1.73
NPAS3-211ENST00000551634 FBXL5Q9UKA1 691 aa25.87■■□□□ 1.73
NPAS3-211ENST00000551634 SAMM50Q9Y512 469 aa25.87■■□□□ 1.73
NPAS3-211ENST00000551634 NPHP3-ACAD11A0A0J9YXS1 232 aa25.87■■□□□ 1.73
NPAS3-211ENST00000551634 BHMG1C9JSJ3 638 aaPredicted RBP25.87■■□□□ 1.73
NPAS3-211ENST00000551634 AFPP02771 609 aaKnown RBP25.87■■□□□ 1.73
NPAS3-211ENST00000551634 FAM98CQ17RN3 349 aaKnown RBP25.87■■□□□ 1.73
NPAS3-211ENST00000551634 ARSHQ5FYA8 562 aa25.87■■□□□ 1.73
NPAS3-211ENST00000551634 AMIGO3Q86WK7 504 aa25.87■■□□□ 1.73
NPAS3-211ENST00000551634 ARFGAP2Q8N6H7 521 aa25.87■■□□□ 1.73
NPAS3-211ENST00000551634 LRRC45Q96CN5 670 aa25.87■■□□□ 1.73
NPAS3-211ENST00000551634 MXD3Q9BW11 206 aa25.87■■□□□ 1.73
NPAS3-211ENST00000551634 NAGPAQ9UK23 515 aa25.87■■□□□ 1.73
NPAS3-211ENST00000551634 FAM182BQ5T319 152 aa25.86■■□□□ 1.73
NPAS3-211ENST00000551634 TTBK2Q6IQ55 1244 aa25.86■■□□□ 1.73
NPAS3-211ENST00000551634 PTF1AQ7RTS3 328 aa25.86■■□□□ 1.73
NPAS3-211ENST00000551634 KLHL7Q8IXQ5 586 aa25.86■■□□□ 1.73
NPAS3-211ENST00000551634 PLAAQ9Y263 795 aa25.86■■□□□ 1.73
NPAS3-211ENST00000551634 GOLGA6L10A6NI86 522 aa25.86■■□□□ 1.73
NPAS3-211ENST00000551634 ENOX2Q16206 610 aaKnown RBP25.86■■□□□ 1.73
NPAS3-211ENST00000551634 YTHDF3Q7Z739 585 aaKnown RBP25.86■■□□□ 1.73
NPAS3-211ENST00000551634 TMBIM4Q9HC24 238 aa25.86■■□□□ 1.73
NPAS3-211ENST00000551634 MYH4Q9Y623 1939 aa25.86■■□□□ 1.73
NPAS3-211ENST00000551634 CCDC188H7C350 402 aa25.85■■□□□ 1.73
NPAS3-211ENST00000551634 FLOT1O75955 427 aa25.85■■□□□ 1.73
NPAS3-211ENST00000551634 MDH1P40925 334 aaKnown RBP25.85■■□□□ 1.73
NPAS3-211ENST00000551634 RNASE9P60153 205 aaKnown RBP25.85■■□□□ 1.73
NPAS3-211ENST00000551634 CACNB1Q02641 598 aaPredicted RBP25.85■■□□□ 1.73
NPAS3-211ENST00000551634 PTGISQ16647 500 aa25.85■■□□□ 1.73
NPAS3-211ENST00000551634 EXOC3L4Q17RC7 722 aa25.85■■□□□ 1.73
NPAS3-211ENST00000551634 LMBR1Q8WVP7 490 aa25.85■■□□□ 1.73
NPAS3-211ENST00000551634 SERPINB13Q9UIV8 391 aa25.85■■□□□ 1.73
NPAS3-211ENST00000551634 GGA2Q9UJY4 613 aa25.85■■□□□ 1.73
NPAS3-211ENST00000551634 KIAA0754O94854 1291 aa25.85■■□□□ 1.73
NPAS3-211ENST00000551634 ERVK-9P63128 1117 aa25.85■■□□□ 1.73
NPAS3-211ENST00000551634 ITGB3BPQ13352 177 aaPredicted RBP25.85■■□□□ 1.73
NPAS3-211ENST00000551634 KNOP1Q1ED39 458 aaKnown RBP25.85■■□□□ 1.73
NPAS3-211ENST00000551634 CRY2Q49AN0 593 aa25.85■■□□□ 1.73
NPAS3-211ENST00000551634 ALKBH5Q6P6C2 394 aaKnown RBP25.85■■□□□ 1.73
NPAS3-211ENST00000551634 A0A0A6YYK5 440 aaPredicted RBP25.84■■□□□ 1.73
NPAS3-211ENST00000551634 USP17L10C9JJH3 530 aa25.84■■□□□ 1.73
NPAS3-211ENST00000551634 PGRMC1O00264 195 aaKnown RBP25.84■■□□□ 1.73
NPAS3-211ENST00000551634 PDXKO00764 312 aa25.84■■□□□ 1.73
NPAS3-211ENST00000551634 TRAPPC3LQ5T215 181 aa25.84■■□□□ 1.73
NPAS3-211ENST00000551634 MAATS1Q7Z4T9 603 aa25.84■■□□□ 1.73
NPAS3-211ENST00000551634 INTUQ9ULD6 942 aa25.84■■□□□ 1.73
NPAS3-211ENST00000551634 MEFVO15553 781 aaPredicted RBP25.84■■□□□ 1.73
NPAS3-211ENST00000551634 CALUO43852 315 aaPredicted RBP25.84■■□□□ 1.73
NPAS3-211ENST00000551634 MED24O75448 989 aa25.84■■□□□ 1.73
NPAS3-211ENST00000551634 SLC9A1P19634 815 aa25.84■■□□□ 1.73
NPAS3-211ENST00000551634 GUCY1A3Q02108 690 aa25.84■■□□□ 1.73
NPAS3-211ENST00000551634 PICALMQ13492 652 aa25.84■■□□□ 1.73
NPAS3-211ENST00000551634 HLTFQ14527 1009 aaKnown RBP eCLIP25.84■■□□□ 1.73
NPAS3-211ENST00000551634 TRADDQ15628 312 aa25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms