RNA–Protein interactions for RNA: ENST00000551418.5

PRPF40B-215, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-215ENST00000551418 TUBE1Q9UJT0 475 aa20.53■□□□□ 0.88
PRPF40B-215ENST00000551418 GRXCR2A6NFK2 248 aa20.52■□□□□ 0.88
PRPF40B-215ENST00000551418 GRM6O15303 877 aa20.52■□□□□ 0.88
PRPF40B-215ENST00000551418 INSRRP14616 1297 aa20.52■□□□□ 0.88
PRPF40B-215ENST00000551418 FBXO47Q5MNV8 452 aa20.52■□□□□ 0.88
PRPF40B-215ENST00000551418 TAF2Q6P1X5 1199 aa20.52■□□□□ 0.88
PRPF40B-215ENST00000551418 EP400NLQ6ZTU2 488 aa20.52■□□□□ 0.88
PRPF40B-215ENST00000551418 HEATR3Q7Z4Q2 680 aa20.52■□□□□ 0.88
PRPF40B-215ENST00000551418 MICU3Q86XE3 530 aa20.52■□□□□ 0.88
PRPF40B-215ENST00000551418 GJD3Q8N144 294 aa20.52■□□□□ 0.88
PRPF40B-215ENST00000551418 FIBCD1Q8N539 461 aa20.52■□□□□ 0.88
PRPF40B-215ENST00000551418 TCEANC2Q96MN5 208 aa20.52■□□□□ 0.88
PRPF40B-215ENST00000551418 FAM49AQ9H0Q0 323 aaPredicted RBP20.52■□□□□ 0.88
PRPF40B-215ENST00000551418 RC3H2Q9HBD1 1191 aaKnown RBP20.52■□□□□ 0.88
PRPF40B-215ENST00000551418 SLC12A7Q9Y666 1083 aa20.52■□□□□ 0.88
PRPF40B-215ENST00000551418 CSPG5O95196 566 aa20.51■□□□□ 0.87
PRPF40B-215ENST00000551418 ARP10275 920 aa20.51■□□□□ 0.87
PRPF40B-215ENST00000551418 CTNNB1P35222 781 aa20.51■□□□□ 0.87
PRPF40B-215ENST00000551418 TMEM62Q0P6H9 643 aa20.51■□□□□ 0.87
PRPF40B-215ENST00000551418 WWC2Q6AWC2 1192 aa20.51■□□□□ 0.87
PRPF40B-215ENST00000551418 FAM122AQ96E09 287 aa20.51■□□□□ 0.87
PRPF40B-215ENST00000551418 CDHR1Q96JP9 859 aa20.51■□□□□ 0.87
PRPF40B-215ENST00000551418 SMARCAD1Q9H4L7 1026 aa20.51■□□□□ 0.87
PRPF40B-215ENST00000551418 SPDYE3A6NKU9 549 aa20.5■□□□□ 0.87
PRPF40B-215ENST00000551418 GPR37L1O60883 481 aa20.5■□□□□ 0.87
PRPF40B-215ENST00000551418 CALM1P0DP23 149 aa20.5■□□□□ 0.87
PRPF40B-215ENST00000551418 CALM2P0DP24 149 aa20.5■□□□□ 0.87
PRPF40B-215ENST00000551418 CALM3P0DP25 149 aa20.5■□□□□ 0.87
PRPF40B-215ENST00000551418 CD52P31358 61 aa20.5■□□□□ 0.87
PRPF40B-215ENST00000551418 GTF2F1P35269 517 aaKnown RBP eCLIP20.5■□□□□ 0.87
PRPF40B-215ENST00000551418 BMPR1AP36894 532 aa20.5■□□□□ 0.87
PRPF40B-215ENST00000551418 LTBRP36941 435 aa20.5■□□□□ 0.87
PRPF40B-215ENST00000551418 MRPS6P82932 125 aaKnown RBP20.5■□□□□ 0.87
PRPF40B-215ENST00000551418 COL19A1Q14993 1142 aa20.5■□□□□ 0.87
PRPF40B-215ENST00000551418 TIGD5Q53EQ6 642 aa20.5■□□□□ 0.87
PRPF40B-215ENST00000551418 ZNF689Q96CS4 500 aaPredicted RBP20.5■□□□□ 0.87
PRPF40B-215ENST00000551418 PABPC5Q96DU9 382 aaKnown RBP20.5■□□□□ 0.87
PRPF40B-215ENST00000551418 MXRA8Q9BRK3 442 aa20.5■□□□□ 0.87
PRPF40B-215ENST00000551418 NSUN3Q9H649 340 aaKnown RBP20.5■□□□□ 0.87
PRPF40B-215ENST00000551418 KCNH7Q9NS40 1196 aa20.5■□□□□ 0.87
PRPF40B-215ENST00000551418 BRPF3Q9ULD4 1205 aa20.5■□□□□ 0.87
PRPF40B-215ENST00000551418 POTEB3A0JP26 581 aa20.49■□□□□ 0.87
PRPF40B-215ENST00000551418 SSTR3P32745 418 aaPredicted RBP20.49■□□□□ 0.87
PRPF40B-215ENST00000551418 DLX2Q07687 328 aaPredicted RBP20.49■□□□□ 0.87
PRPF40B-215ENST00000551418 FUT2Q10981 343 aa20.49■□□□□ 0.87
PRPF40B-215ENST00000551418 PLCB4Q15147 1175 aa20.49■□□□□ 0.87
PRPF40B-215ENST00000551418 POTEBQ6S5H4 581 aa20.49■□□□□ 0.87
PRPF40B-215ENST00000551418 SGMS1Q86VZ5 419 aa20.49■□□□□ 0.87
PRPF40B-215ENST00000551418 JPH1Q9HDC5 661 aaPredicted RBP20.49■□□□□ 0.87
PRPF40B-215ENST00000551418 ANO2Q9NQ90 1003 aa20.49■□□□□ 0.87
PRPF40B-215ENST00000551418 TMEM260Q9NX78 707 aa20.49■□□□□ 0.87
PRPF40B-215ENST00000551418 ADGRA3Q8IWK6 1321 aa20.49■□□□□ 0.87
PRPF40B-215ENST00000551418 CNTNAP5Q8WYK1 1306 aa20.49■□□□□ 0.87
PRPF40B-215ENST00000551418 C5orf67F2Z3F1 127 aa20.48■□□□□ 0.87
PRPF40B-215ENST00000551418 ADAMTS3O15072 1205 aa20.48■□□□□ 0.87
PRPF40B-215ENST00000551418 ITGB3BPQ13352 177 aaPredicted RBP20.48■□□□□ 0.87
PRPF40B-215ENST00000551418 APOA5Q6Q788 366 aa20.48■□□□□ 0.87
PRPF40B-215ENST00000551418 TSHZ1Q6ZSZ6 1077 aa20.48■□□□□ 0.87
PRPF40B-215ENST00000551418 RSPH3Q86UC2 560 aa20.48■□□□□ 0.87
PRPF40B-215ENST00000551418 CRIPAKQ8N1N5 446 aa20.48■□□□□ 0.87
PRPF40B-215ENST00000551418 UIMC1Q96RL1 719 aa20.48■□□□□ 0.87
PRPF40B-215ENST00000551418 ALG13Q9NP73 1137 aaKnown RBP20.48■□□□□ 0.87
PRPF40B-215ENST00000551418 CLDND1Q9NY35 253 aa20.48■□□□□ 0.87
PRPF40B-215ENST00000551418 SLC9A2Q9UBY0 812 aa20.48■□□□□ 0.87
PRPF40B-215ENST00000551418 KIAA1671Q9BY89 1806 aa20.48■□□□□ 0.87
PRPF40B-215ENST00000551418 DGKIO75912 1065 aa20.47■□□□□ 0.87
PRPF40B-215ENST00000551418 ACTR2P61160 394 aa20.47■□□□□ 0.87
PRPF40B-215ENST00000551418 EXOSC10Q01780 885 aaKnown RBP20.47■□□□□ 0.87
PRPF40B-215ENST00000551418 HYAL1Q12794 435 aa20.47■□□□□ 0.87
PRPF40B-215ENST00000551418 CAMK1Q14012 370 aa20.47■□□□□ 0.87
PRPF40B-215ENST00000551418 BTG3Q14201 252 aaPredicted RBP20.47■□□□□ 0.87
PRPF40B-215ENST00000551418 CLUL1Q15846 466 aa20.47■□□□□ 0.87
PRPF40B-215ENST00000551418 RASEFQ8IZ41 740 aa20.47■□□□□ 0.87
PRPF40B-215ENST00000551418 CLP1Q92989 425 aaKnown RBP20.47■□□□□ 0.87
PRPF40B-215ENST00000551418 V9GY48 417 aaPredicted RBP20.47■□□□□ 0.87
PRPF40B-215ENST00000551418 RRN3P2A6NIE6 340 aa20.46■□□□□ 0.87
PRPF40B-215ENST00000551418 MAFGO15525 162 aa20.46■□□□□ 0.87
PRPF40B-215ENST00000551418 RB1P06400 928 aa20.46■□□□□ 0.87
PRPF40B-215ENST00000551418 DNAJB1P25685 340 aa20.46■□□□□ 0.87
PRPF40B-215ENST00000551418 GATMP50440 423 aa20.46■□□□□ 0.87
PRPF40B-215ENST00000551418 NAPAP54920 295 aa20.46■□□□□ 0.87
PRPF40B-215ENST00000551418 ADCK5Q3MIX3 580 aa20.46■□□□□ 0.87
PRPF40B-215ENST00000551418 AGO4Q9HCK5 861 aaKnown RBP20.46■□□□□ 0.87
PRPF40B-215ENST00000551418 RIC8AQ9NPQ8 531 aa20.46■□□□□ 0.87
PRPF40B-215ENST00000551418 FAM217BQ9NTX9 383 aaPredicted RBP20.46■□□□□ 0.87
PRPF40B-215ENST00000551418 TRPC6Q9Y210 931 aa20.46■□□□□ 0.87
PRPF40B-215ENST00000551418 MRPL42Q9Y6G3 142 aaKnown RBP20.46■□□□□ 0.87
PRPF40B-215ENST00000551418 EVPLQ92817 2033 aa20.45■□□□□ 0.86
PRPF40B-215ENST00000551418 STXBP3O00186 592 aa20.45■□□□□ 0.86
PRPF40B-215ENST00000551418 LINC01565O15544 149 aa20.45■□□□□ 0.86
PRPF40B-215ENST00000551418 CCNE2O96020 404 aa20.45■□□□□ 0.86
PRPF40B-215ENST00000551418 STAT5BP51692 787 aa20.45■□□□□ 0.86
PRPF40B-215ENST00000551418 TMEM266Q2M3C6 531 aa20.45■□□□□ 0.86
PRPF40B-215ENST00000551418 CTC1Q2NKJ3 1217 aa20.45■□□□□ 0.86
PRPF40B-215ENST00000551418 C11orf84Q9BUA3 381 aaPredicted RBP20.45■□□□□ 0.86
PRPF40B-215ENST00000551418 ANO3Q9BYT9 981 aa20.45■□□□□ 0.86
PRPF40B-215ENST00000551418 TMX1Q9H3N1 280 aa20.45■□□□□ 0.86
PRPF40B-215ENST00000551418 IGFLR1Q9H665 355 aa20.45■□□□□ 0.86
PRPF40B-215ENST00000551418 CDHR5Q9HBB8 845 aa20.45■□□□□ 0.86
PRPF40B-215ENST00000551418 PADI3Q9ULW8 664 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms