RNA–Protein interactions for RNA: ENST00000551355.5

NEK3-203, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-203ENST00000551355 KIAA1468Q9P260 1216 aa11.63□□□□□ -0.55
NEK3-203ENST00000551355 ZHX1Q9UKY1 873 aaPredicted RBP11.63□□□□□ -0.55
NEK3-203ENST00000551355 FAM184BQ9ULE4 1060 aa11.63□□□□□ -0.55
NEK3-203ENST00000551355 POTEB3A0JP26 581 aa11.62□□□□□ -0.55
NEK3-203ENST00000551355 GTPBP6O43824 516 aaPredicted RBP11.62□□□□□ -0.55
NEK3-203ENST00000551355 EYA4O95677 639 aa11.62□□□□□ -0.55
NEK3-203ENST00000551355 CAVIN2O95810 425 aa11.62□□□□□ -0.55
NEK3-203ENST00000551355 SUPT20HL2P0C7V6 817 aa11.62□□□□□ -0.55
NEK3-203ENST00000551355 ZNF865P0CJ78 1059 aaPredicted RBP11.62□□□□□ -0.55
NEK3-203ENST00000551355 CCDC192P0DO97 292 aa11.62□□□□□ -0.55
NEK3-203ENST00000551355 ZNF445P59923 1031 aa11.62□□□□□ -0.55
NEK3-203ENST00000551355 MDM2Q00987 491 aaPredicted RBP11.62□□□□□ -0.55
NEK3-203ENST00000551355 CYP4A11Q02928 519 aa11.62□□□□□ -0.55
NEK3-203ENST00000551355 TNFAIP2Q03169 654 aa11.62□□□□□ -0.55
NEK3-203ENST00000551355 CCDC144BQ3MJ40 725 aa11.62□□□□□ -0.55
NEK3-203ENST00000551355 BRDTQ58F21 947 aaPredicted RBP11.62□□□□□ -0.55
NEK3-203ENST00000551355 POTEBQ6S5H4 581 aa11.62□□□□□ -0.55
NEK3-203ENST00000551355 SASS6Q6UVJ0 657 aa11.62□□□□□ -0.55
NEK3-203ENST00000551355 PPTC7Q8NI37 304 aa11.62□□□□□ -0.55
NEK3-203ENST00000551355 CD99L2Q8TCZ2 262 aa11.62□□□□□ -0.55
NEK3-203ENST00000551355 RAET1EQ8TD07 263 aa11.62□□□□□ -0.55
NEK3-203ENST00000551355 AFAP1L1Q8TED9 768 aa11.62□□□□□ -0.55
NEK3-203ENST00000551355 ZNF296Q8WUU4 475 aaPredicted RBP11.62□□□□□ -0.55
NEK3-203ENST00000551355 SPATA33Q96N06 139 aa11.62□□□□□ -0.55
NEK3-203ENST00000551355 GSDMAQ96QA5 445 aa11.62□□□□□ -0.55
NEK3-203ENST00000551355 AZI2Q9H6S1 392 aa11.62□□□□□ -0.55
NEK3-203ENST00000551355 PDGFCQ9NRA1 345 aa11.62□□□□□ -0.55
NEK3-203ENST00000551355 ANKEF1Q9NU02 776 aa11.62□□□□□ -0.55
NEK3-203ENST00000551355 RMND1Q9NWS8 449 aa11.62□□□□□ -0.55
NEK3-203ENST00000551355 RGL1Q9NZL6 768 aa11.62□□□□□ -0.55
NEK3-203ENST00000551355 DBR1Q9UK59 544 aaKnown RBP11.62□□□□□ -0.55
NEK3-203ENST00000551355 PPME1Q9Y570 386 aa11.62□□□□□ -0.55
NEK3-203ENST00000551355 PLXNB2O15031 1838 aa11.62□□□□□ -0.55
NEK3-203ENST00000551355 IGKV6D-21A0A0A0MT36 114 aa11.61□□□□□ -0.55
NEK3-203ENST00000551355 POTEFA5A3E0 1075 aa11.61□□□□□ -0.55
NEK3-203ENST00000551355 BACH1O14867 736 aa11.61□□□□□ -0.55
NEK3-203ENST00000551355 PPFIA4O75335 1185 aa11.61□□□□□ -0.55
NEK3-203ENST00000551355 ARIH2O95376 493 aa11.61□□□□□ -0.55
NEK3-203ENST00000551355 PLA2G4BP0C869 781 aa11.61□□□□□ -0.55
NEK3-203ENST00000551355 AKR1A1P14550 325 aa11.61□□□□□ -0.55
NEK3-203ENST00000551355 CYP2C19P33261 490 aa11.61□□□□□ -0.55
NEK3-203ENST00000551355 ADCYAP1R1P41586 468 aa11.61□□□□□ -0.55
NEK3-203ENST00000551355 CTTNQ14247 550 aaKnown RBP11.61□□□□□ -0.55
NEK3-203ENST00000551355 CCL14Q16627 93 aa11.61□□□□□ -0.55
NEK3-203ENST00000551355 NT5DC1Q5TFE4 455 aa11.61□□□□□ -0.55
NEK3-203ENST00000551355 SWSAP1Q6NVH7 229 aa11.61□□□□□ -0.55
NEK3-203ENST00000551355 POTEGQ6S5H5 508 aa11.61□□□□□ -0.55
NEK3-203ENST00000551355 PLPPR4Q7Z2D5 763 aa11.61□□□□□ -0.55
NEK3-203ENST00000551355 DNAJC5GQ8N7S2 189 aa11.61□□□□□ -0.55
NEK3-203ENST00000551355 SYT2Q8N9I0 419 aaPredicted RBP11.61□□□□□ -0.55
NEK3-203ENST00000551355 TRIML1Q8N9V2 468 aa11.61□□□□□ -0.55
NEK3-203ENST00000551355 SLAIN1Q8ND83 568 aa11.61□□□□□ -0.55
NEK3-203ENST00000551355 SPATA20Q8TB22 786 aa11.61□□□□□ -0.55
NEK3-203ENST00000551355 SMARCE1Q969G3 411 aa11.61□□□□□ -0.55
NEK3-203ENST00000551355 FAM167AQ96KS9 214 aa11.61□□□□□ -0.55
NEK3-203ENST00000551355 PLIN2Q99541 437 aa11.61□□□□□ -0.55
NEK3-203ENST00000551355 GPR20Q99678 358 aa11.61□□□□□ -0.55
NEK3-203ENST00000551355 C7orf25Q9BPX7 421 aa11.61□□□□□ -0.55
NEK3-203ENST00000551355 TIPINQ9BVW5 301 aa11.61□□□□□ -0.55
NEK3-203ENST00000551355 GZF1Q9H116 711 aaPredicted RBP11.61□□□□□ -0.55
NEK3-203ENST00000551355 ZNF302Q9NR11 478 aa11.61□□□□□ -0.55
NEK3-203ENST00000551355 BLOC1S4Q9NUP1 217 aa11.61□□□□□ -0.55
NEK3-203ENST00000551355 FLRT1Q9NZU1 646 aa11.61□□□□□ -0.55
NEK3-203ENST00000551355 TUBE1Q9UJT0 475 aa11.61□□□□□ -0.55
NEK3-203ENST00000551355 GABRQQ9UN88 632 aa11.61□□□□□ -0.55
NEK3-203ENST00000551355 MAFBQ9Y5Q3 323 aaPredicted RBP11.61□□□□□ -0.55
NEK3-203ENST00000551355 LCTP09848 1927 aa11.6□□□□□ -0.55
NEK3-203ENST00000551355 PVALEFA0A1B0GWK0 134 aa11.6□□□□□ -0.55
NEK3-203ENST00000551355 GSTTP1A0A1W2PQM5 241 aa11.6□□□□□ -0.55
NEK3-203ENST00000551355 SYCE3A1L190 88 aa11.6□□□□□ -0.55
NEK3-203ENST00000551355 ADCY3O60266 1144 aa11.6□□□□□ -0.55
NEK3-203ENST00000551355 LGR5O75473 907 aa11.6□□□□□ -0.55
NEK3-203ENST00000551355 ECM2O94769 699 aaPredicted RBP11.6□□□□□ -0.55
NEK3-203ENST00000551355 HMGCRP04035 888 aa11.6□□□□□ -0.55
NEK3-203ENST00000551355 SMPD1P17405 629 aa11.6□□□□□ -0.55
NEK3-203ENST00000551355 YWHABP31946 246 aaKnown RBP11.6□□□□□ -0.55
NEK3-203ENST00000551355 AFMP43652 599 aa11.6□□□□□ -0.55
NEK3-203ENST00000551355 STAT5BP51692 787 aa11.6□□□□□ -0.55
NEK3-203ENST00000551355 ARHGAP1Q07960 439 aa11.6□□□□□ -0.55
NEK3-203ENST00000551355 DPYDQ12882 1025 aa11.6□□□□□ -0.55
NEK3-203ENST00000551355 ECM1Q16610 540 aa11.6□□□□□ -0.55
NEK3-203ENST00000551355 XKR3Q5GH77 459 aa11.6□□□□□ -0.55
NEK3-203ENST00000551355 EXOC8Q8IYI6 725 aa11.6□□□□□ -0.55
NEK3-203ENST00000551355 BANK1Q8NDB2 785 aa11.6□□□□□ -0.55
NEK3-203ENST00000551355 TRIB2Q92519 343 aa11.6□□□□□ -0.55
NEK3-203ENST00000551355 CCDC43Q96MW1 224 aaKnown RBP11.6□□□□□ -0.55
NEK3-203ENST00000551355 AP5M1Q9H0R1 490 aa11.6□□□□□ -0.55
NEK3-203ENST00000551355 SMARCAD1Q9H4L7 1026 aa11.6□□□□□ -0.55
NEK3-203ENST00000551355 NRBP2Q9NSY0 501 aa11.6□□□□□ -0.55
NEK3-203ENST00000551355 GABBR1Q9UBS5 961 aa11.6□□□□□ -0.55
NEK3-203ENST00000551355 EMSYQ7Z589 1322 aa11.6□□□□□ -0.55
NEK3-203ENST00000551355 IGSF9BQ9UPX0 1349 aa11.6□□□□□ -0.55
NEK3-203ENST00000551355 ARHGEF35A5YM69 484 aa11.59□□□□□ -0.55
NEK3-203ENST00000551355 E9PMD0 336 aa11.59□□□□□ -0.55
NEK3-203ENST00000551355 KPNA6O60684 536 aa11.59□□□□□ -0.55
NEK3-203ENST00000551355 DUSP11O75319 330 aaKnown RBP11.59□□□□□ -0.55
NEK3-203ENST00000551355 HOXD8P13378 290 aaPredicted RBP11.59□□□□□ -0.55
NEK3-203ENST00000551355 CYBAP13498 195 aa11.59□□□□□ -0.55
NEK3-203ENST00000551355 TCF7P36402 384 aaPredicted RBP11.59□□□□□ -0.55
NEK3-203ENST00000551355 SARSP49591 514 aaKnown RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms