RNA–Protein interactions for RNA: ENST00000551301.1

SLC48A1-208, Transcript of solute carrier family 48 member 1, humanhuman

TSL 2

Gene SLC48A1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-208ENST00000551301 TMCO2Q7Z6W1 182 aaPredicted RBP23.11■■□□□ 1.29
SLC48A1-208ENST00000551301 RPAINQ86UA6 219 aa23.11■■□□□ 1.29
SLC48A1-208ENST00000551301 PLA2G4DQ86XP0 818 aa23.11■■□□□ 1.29
SLC48A1-208ENST00000551301 ATXN2LQ8WWM7 1075 aaKnown RBP23.11■■□□□ 1.29
SLC48A1-208ENST00000551301 SLC26A6Q9BXS9 759 aa23.11■■□□□ 1.29
SLC48A1-208ENST00000551301 CPLX1O14810 134 aa23.1■■□□□ 1.29
SLC48A1-208ENST00000551301 BACH1O14867 736 aa23.1■■□□□ 1.29
SLC48A1-208ENST00000551301 IFNAR1P17181 557 aa23.1■■□□□ 1.29
SLC48A1-208ENST00000551301 IGBP1P78318 339 aa23.1■■□□□ 1.29
SLC48A1-208ENST00000551301 SETQ01105 290 aaPredicted RBP23.1■■□□□ 1.29
SLC48A1-208ENST00000551301 FAM160B1Q5W0V3 765 aa23.1■■□□□ 1.29
SLC48A1-208ENST00000551301 CPLX2Q6PUV4 134 aaKnown RBP23.1■■□□□ 1.29
SLC48A1-208ENST00000551301 PHKBQ93100 1093 aa23.1■■□□□ 1.29
SLC48A1-208ENST00000551301 IFIH1Q9BYX4 1025 aaKnown RBP23.1■■□□□ 1.29
SLC48A1-208ENST00000551301 ZSWIM6Q9HCJ5 1215 aa23.1■■□□□ 1.29
SLC48A1-208ENST00000551301 TTC28Q96AY4 2481 aa23.1■■□□□ 1.29
SLC48A1-208ENST00000551301 PRUNE2Q8WUY3 3088 aa23.1■■□□□ 1.29
SLC48A1-208ENST00000551301 CHD7Q9P2D1 2997 aa23.09■■□□□ 1.29
SLC48A1-208ENST00000551301 M0QZ92 97 aa23.09■■□□□ 1.29
SLC48A1-208ENST00000551301 CYP3A4P08684 503 aa23.09■■□□□ 1.29
SLC48A1-208ENST00000551301 POU3F3P20264 500 aaPredicted RBP23.09■■□□□ 1.29
SLC48A1-208ENST00000551301 PDIA3P30101 505 aaKnown RBP23.09■■□□□ 1.29
SLC48A1-208ENST00000551301 EVCP57679 992 aa23.09■■□□□ 1.29
SLC48A1-208ENST00000551301 CCT2P78371 535 aaKnown RBP23.09■■□□□ 1.29
SLC48A1-208ENST00000551301 SKIV2LQ15477 1246 aaKnown RBP23.09■■□□□ 1.29
SLC48A1-208ENST00000551301 TCTN1Q2MV58 587 aa23.09■■□□□ 1.29
SLC48A1-208ENST00000551301 TGS1Q96RS0 853 aaKnown RBP23.09■■□□□ 1.29
SLC48A1-208ENST00000551301 TM6SF1Q9BZW5 370 aa23.09■■□□□ 1.29
SLC48A1-208ENST00000551301 PPP4R2Q9NY27 417 aa23.09■■□□□ 1.29
SLC48A1-208ENST00000551301 TRANK1O15050 2925 aa23.09■■□□□ 1.29
SLC48A1-208ENST00000551301 EYSQ5T1H1 3165 aa23.08■■□□□ 1.29
SLC48A1-208ENST00000551301 MBLAC1A4D2B0 266 aaPredicted RBP23.08■■□□□ 1.29
SLC48A1-208ENST00000551301 INSRRP14616 1297 aa23.08■■□□□ 1.29
SLC48A1-208ENST00000551301 ITGB3BPQ13352 177 aaPredicted RBP23.08■■□□□ 1.29
SLC48A1-208ENST00000551301 PKN1Q16512 942 aa23.08■■□□□ 1.29
SLC48A1-208ENST00000551301 IER5Q5VY09 327 aa23.08■■□□□ 1.29
SLC48A1-208ENST00000551301 ERICH6BQ5W0A0 696 aa23.08■■□□□ 1.29
SLC48A1-208ENST00000551301 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.08■■□□□ 1.291e-6■■■■□ 24.4
SLC48A1-208ENST00000551301 RUFY4Q6ZNE9 571 aa23.08■■□□□ 1.29
SLC48A1-208ENST00000551301 TBC1D22BQ9NU19 505 aa23.08■■□□□ 1.29
SLC48A1-208ENST00000551301 POTEB3A0JP26 581 aa23.07■■□□□ 1.28
SLC48A1-208ENST00000551301 LCHNA4D1U4 455 aa23.07■■□□□ 1.28
SLC48A1-208ENST00000551301 DDX39AO00148 427 aaKnown RBP23.07■■□□□ 1.28
SLC48A1-208ENST00000551301 RFXAPO00287 272 aa23.07■■□□□ 1.28
SLC48A1-208ENST00000551301 IPO5O00410 1097 aaKnown RBP23.07■■□□□ 1.28
SLC48A1-208ENST00000551301 MRPS5P82675 430 aaKnown RBP23.07■■□□□ 1.28
SLC48A1-208ENST00000551301 SSRP1Q08945 709 aaKnown RBP23.07■■□□□ 1.28
SLC48A1-208ENST00000551301 AAK1Q2M2I8 961 aa23.07■■□□□ 1.28
SLC48A1-208ENST00000551301 MIS18BP1Q6P0N0 1132 aa23.07■■□□□ 1.28
SLC48A1-208ENST00000551301 POTEBQ6S5H4 581 aa23.07■■□□□ 1.28
SLC48A1-208ENST00000551301 DNAJB3Q8WWF6 145 aa23.07■■□□□ 1.28
SLC48A1-208ENST00000551301 YME1L1Q96TA2 773 aa23.07■■□□□ 1.28
SLC48A1-208ENST00000551301 ZNF577Q9BSK1 485 aa23.07■■□□□ 1.28
SLC48A1-208ENST00000551301 SH3GLB2Q9NR46 395 aa23.07■■□□□ 1.28
SLC48A1-208ENST00000551301 MTCH2Q9Y6C9 303 aa23.07■■□□□ 1.28
SLC48A1-208ENST00000551301 FAM86B1E9PN63 330 aa23.06■■□□□ 1.28
SLC48A1-208ENST00000551301 CHRNA1P02708 482 aa23.06■■□□□ 1.28
SLC48A1-208ENST00000551301 FAM86B2P0C5J1 330 aa23.06■■□□□ 1.28
SLC48A1-208ENST00000551301 NLRP5P59047 1200 aa23.06■■□□□ 1.28
SLC48A1-208ENST00000551301 NTRK3Q16288 839 aa23.06■■□□□ 1.28
SLC48A1-208ENST00000551301 ZNF274Q96GC6 653 aaPredicted RBP23.06■■□□□ 1.28
SLC48A1-208ENST00000551301 PCYT2Q99447 389 aa23.06■■□□□ 1.28
SLC48A1-208ENST00000551301 FAM49AQ9H0Q0 323 aaPredicted RBP23.06■■□□□ 1.28
SLC48A1-208ENST00000551301 NCOA5Q9HCD5 579 aaKnown RBP23.06■■□□□ 1.28
SLC48A1-208ENST00000551301 LMCD1Q9NZU5 365 aa23.06■■□□□ 1.28
SLC48A1-208ENST00000551301 PRRC2BQ5JSZ5 2229 aaKnown RBP23.06■■□□□ 1.28
SLC48A1-208ENST00000551301 MICAL3Q7RTP6 2002 aa23.06■■□□□ 1.28
SLC48A1-208ENST00000551301 PTPRSQ13332 1948 aa23.06■■□□□ 1.28
SLC48A1-208ENST00000551301 LINC01553A4QN01 128 aa23.05■■□□□ 1.28
SLC48A1-208ENST00000551301 EIF5BO60841 1220 aaKnown RBP23.05■■□□□ 1.28
SLC48A1-208ENST00000551301 UPP2O95045 317 aa23.05■■□□□ 1.28
SLC48A1-208ENST00000551301 ATG7O95352 703 aa23.05■■□□□ 1.28
SLC48A1-208ENST00000551301 GHRP10912 638 aa23.05■■□□□ 1.28
SLC48A1-208ENST00000551301 ERVK-21P61565 698 aa23.05■■□□□ 1.28
SLC48A1-208ENST00000551301 MRPS6P82932 125 aaKnown RBP23.05■■□□□ 1.28
SLC48A1-208ENST00000551301 GRB10Q13322 594 aa23.05■■□□□ 1.28
SLC48A1-208ENST00000551301 PLCB4Q15147 1175 aa23.05■■□□□ 1.28
SLC48A1-208ENST00000551301 MARCH8Q5T0T0 291 aa23.05■■□□□ 1.28
SLC48A1-208ENST00000551301 TOP1MTQ969P6 601 aa23.05■■□□□ 1.28
SLC48A1-208ENST00000551301 C22orf23Q9BZE7 217 aa23.05■■□□□ 1.28
SLC48A1-208ENST00000551301 PRDM6Q9NQX0 595 aa23.05■■□□□ 1.28
SLC48A1-208ENST00000551301 PDRG1Q9NUG6 133 aa23.05■■□□□ 1.28
SLC48A1-208ENST00000551301 MTUS1Q9ULD2 1270 aa23.05■■□□□ 1.28
SLC48A1-208ENST00000551301 PCDHA2Q9Y5H9 948 aa23.05■■□□□ 1.28
SLC48A1-208ENST00000551301 EPOPA6NHQ4 379 aa23.04■■□□□ 1.28
SLC48A1-208ENST00000551301 HBP1O60381 514 aa23.04■■□□□ 1.28
SLC48A1-208ENST00000551301 ARHGEF15O94989 841 aa23.04■■□□□ 1.28
SLC48A1-208ENST00000551301 KRT76Q01546 638 aa23.04■■□□□ 1.28
SLC48A1-208ENST00000551301 TOB2Q14106 344 aaPredicted RBP23.04■■□□□ 1.28
SLC48A1-208ENST00000551301 PRR16Q569H4 304 aa23.04■■□□□ 1.28
SLC48A1-208ENST00000551301 PDXDC2PQ6P474 469 aa23.04■■□□□ 1.28
SLC48A1-208ENST00000551301 CKAP2LQ8IYA6 745 aa23.04■■□□□ 1.28
SLC48A1-208ENST00000551301 CRYGNQ8WXF5 182 aa23.04■■□□□ 1.28
SLC48A1-208ENST00000551301 SAMD11Q96NU1 681 aa23.04■■□□□ 1.28
SLC48A1-208ENST00000551301 ASB2Q96Q27 587 aa23.04■■□□□ 1.28
SLC48A1-208ENST00000551301 UPF3BQ9BZI7 483 aaKnown RBP23.04■■□□□ 1.28
SLC48A1-208ENST00000551301 ZNF302Q9NR11 478 aa23.04■■□□□ 1.28
SLC48A1-208ENST00000551301 VPS54Q9P1Q0 977 aa23.04■■□□□ 1.28
SLC48A1-208ENST00000551301 CDY2AQ9Y6F7 541 aa23.04■■□□□ 1.28
SLC48A1-208ENST00000551301 IGLV3-22A0A075B6J6 115 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms