RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 SELPP16109 830 aa17.45■□□□□ 0.38
PRPF40B-211ENST00000551063 MARK3P27448 753 aa17.45■□□□□ 0.38
PRPF40B-211ENST00000551063 STAT5BP51692 787 aa17.45■□□□□ 0.38
PRPF40B-211ENST00000551063 ADAM17P78536 824 aa17.45■□□□□ 0.38
PRPF40B-211ENST00000551063 ZNF200P98182 395 aaPredicted RBP17.45■□□□□ 0.38
PRPF40B-211ENST00000551063 NR5A1Q13285 461 aa17.45■□□□□ 0.38
PRPF40B-211ENST00000551063 SAFBQ15424 915 aaKnown RBP eCLIP17.45■□□□□ 0.38
PRPF40B-211ENST00000551063 TRIM71Q2Q1W2 868 aaKnown RBP17.45■□□□□ 0.38
PRPF40B-211ENST00000551063 LETM2Q2VYF4 491 aa17.45■□□□□ 0.38
PRPF40B-211ENST00000551063 FAM160B1Q5W0V3 765 aa17.45■□□□□ 0.38
PRPF40B-211ENST00000551063 RPUSD2Q8IZ73 545 aaKnown RBP17.45■□□□□ 0.38
PRPF40B-211ENST00000551063 FAM184AQ8NB25 1140 aa17.45■□□□□ 0.38
PRPF40B-211ENST00000551063 LMBR1Q8WVP7 490 aa17.45■□□□□ 0.38
PRPF40B-211ENST00000551063 ATP6V0A1Q93050 837 aa17.45■□□□□ 0.38
PRPF40B-211ENST00000551063 SCLYQ96I15 445 aa17.45■□□□□ 0.38
PRPF40B-211ENST00000551063 C8orf76Q96K31 380 aa17.45■□□□□ 0.38
PRPF40B-211ENST00000551063 RNPC3Q96LT9 517 aaKnown RBP17.45■□□□□ 0.38
PRPF40B-211ENST00000551063 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.45■□□□□ 0.38
PRPF40B-211ENST00000551063 TEKT3Q9BXF9 490 aa17.45■□□□□ 0.38
PRPF40B-211ENST00000551063 SETD4Q9NVD3 440 aa17.45■□□□□ 0.38
PRPF40B-211ENST00000551063 DDX25Q9UHL0 483 aaKnown RBP17.45■□□□□ 0.38
PRPF40B-211ENST00000551063 WDR64B1ANS9 1081 aa17.44■□□□□ 0.38
PRPF40B-211ENST00000551063 BACH1O14867 736 aa17.44■□□□□ 0.38
PRPF40B-211ENST00000551063 GAS7O60861 476 aa17.44■□□□□ 0.38
PRPF40B-211ENST00000551063 CAND2O75155 1236 aa17.44■□□□□ 0.38
PRPF40B-211ENST00000551063 CD2BP2O95400 341 aaKnown RBP17.44■□□□□ 0.38
PRPF40B-211ENST00000551063 TMEM240Q5SV17 173 aa17.44■□□□□ 0.38
PRPF40B-211ENST00000551063 LRCH2Q5VUJ6 765 aa17.44■□□□□ 0.38
PRPF40B-211ENST00000551063 LRRC8DQ7L1W4 858 aa17.44■□□□□ 0.38
PRPF40B-211ENST00000551063 C16orf59Q7L2K0 433 aa17.44■□□□□ 0.38
PRPF40B-211ENST00000551063 CCDC60Q8IWA6 550 aaPredicted RBP17.44■□□□□ 0.38
PRPF40B-211ENST00000551063 ETNPPLQ8TBG4 499 aa17.44■□□□□ 0.38
PRPF40B-211ENST00000551063 TMX3Q96JJ7 454 aa17.44■□□□□ 0.38
PRPF40B-211ENST00000551063 FAM161BQ96MY7 647 aa17.44■□□□□ 0.38
PRPF40B-211ENST00000551063 GUCD1Q96NT3 240 aa17.44■□□□□ 0.38
PRPF40B-211ENST00000551063 KIF3AQ9Y496 699 aa17.44■□□□□ 0.38
PRPF40B-211ENST00000551063 RRN3P2A6NIE6 340 aa17.43■□□□□ 0.38
PRPF40B-211ENST00000551063 BTBD18B2RXH4 712 aa17.43■□□□□ 0.38
PRPF40B-211ENST00000551063 TREHO43280 583 aa17.43■□□□□ 0.38
PRPF40B-211ENST00000551063 PSMD10O75832 226 aa17.43■□□□□ 0.38
PRPF40B-211ENST00000551063 PSAPP07602 524 aa17.43■□□□□ 0.38
PRPF40B-211ENST00000551063 ACRP10323 421 aa17.43■□□□□ 0.38
PRPF40B-211ENST00000551063 CKBP12277 381 aa17.43■□□□□ 0.38
PRPF40B-211ENST00000551063 JAK3P52333 1124 aa17.43■□□□□ 0.38
PRPF40B-211ENST00000551063 FOSBP53539 338 aa17.43■□□□□ 0.38
PRPF40B-211ENST00000551063 PLCB4Q15147 1175 aa17.43■□□□□ 0.38
PRPF40B-211ENST00000551063 GRIK4Q16099 956 aa17.43■□□□□ 0.38
PRPF40B-211ENST00000551063 EARS2Q5JPH6 523 aaKnown RBP17.43■□□□□ 0.38
PRPF40B-211ENST00000551063 RASIP1Q5U651 963 aa17.43■□□□□ 0.38
PRPF40B-211ENST00000551063 TAF2Q6P1X5 1199 aa17.43■□□□□ 0.38
PRPF40B-211ENST00000551063 RDM1Q8NG50 284 aa17.43■□□□□ 0.38
PRPF40B-211ENST00000551063 WNT8BQ93098 351 aa17.43■□□□□ 0.38
PRPF40B-211ENST00000551063 UIMC1Q96RL1 719 aa17.43■□□□□ 0.38
PRPF40B-211ENST00000551063 MTIF3Q9H2K0 278 aaKnown RBP17.43■□□□□ 0.38
PRPF40B-211ENST00000551063 KCNMB3Q9NPA1 279 aa17.43■□□□□ 0.38
PRPF40B-211ENST00000551063 ZNF302Q9NR11 478 aa17.43■□□□□ 0.38
PRPF40B-211ENST00000551063 TRPC6Q9Y210 931 aa17.43■□□□□ 0.38
PRPF40B-211ENST00000551063 PCDHA10Q9Y5I2 948 aa17.43■□□□□ 0.38
PRPF40B-211ENST00000551063 DOCK5Q9H7D0 1870 aa17.43■□□□□ 0.38
PRPF40B-211ENST00000551063 MBLAC1A4D2B0 266 aaPredicted RBP17.42■□□□□ 0.38
PRPF40B-211ENST00000551063 TBX3O15119 743 aa17.42■□□□□ 0.38
PRPF40B-211ENST00000551063 SLC37A4O43826 429 aa17.42■□□□□ 0.38
PRPF40B-211ENST00000551063 CCNT1O60563 726 aaKnown RBP17.42■□□□□ 0.38
PRPF40B-211ENST00000551063 SFNP31947 248 aa17.42■□□□□ 0.38
PRPF40B-211ENST00000551063 B3GNT9Q6UX72 402 aa17.42■□□□□ 0.38
PRPF40B-211ENST00000551063 ZNF365Q70YC5 407 aa17.42■□□□□ 0.38
PRPF40B-211ENST00000551063 RPAINQ86UA6 219 aa17.42■□□□□ 0.38
PRPF40B-211ENST00000551063 FBXO18Q8NFZ0 1043 aa17.42■□□□□ 0.38
PRPF40B-211ENST00000551063 ATP8B4Q8TF62 1192 aa17.42■□□□□ 0.38
PRPF40B-211ENST00000551063 HERVK_113Q902F9 699 aa17.42■□□□□ 0.38
PRPF40B-211ENST00000551063 VWCEQ96DN2 955 aa17.42■□□□□ 0.38
PRPF40B-211ENST00000551063 SEMA6BQ9H3T3 888 aa17.42■□□□□ 0.38
PRPF40B-211ENST00000551063 MAFBQ9Y5Q3 323 aaPredicted RBP17.42■□□□□ 0.38
PRPF40B-211ENST00000551063 IGSF9BQ9UPX0 1349 aa17.42■□□□□ 0.38
PRPF40B-211ENST00000551063 FAM205CA6NFA0 338 aa17.41■□□□□ 0.38
PRPF40B-211ENST00000551063 FGBP02675 491 aa17.41■□□□□ 0.38
PRPF40B-211ENST00000551063 RPLP2P05387 115 aaKnown RBP17.41■□□□□ 0.38
PRPF40B-211ENST00000551063 INSRRP14616 1297 aa17.41■□□□□ 0.38
PRPF40B-211ENST00000551063 GUCY1B3Q02153 619 aa17.41■□□□□ 0.38
PRPF40B-211ENST00000551063 SWSAP1Q6NVH7 229 aa17.41■□□□□ 0.38
PRPF40B-211ENST00000551063 PDXDC2PQ6P474 469 aa17.41■□□□□ 0.38
PRPF40B-211ENST00000551063 TRAF7Q6Q0C0 670 aa17.41■□□□□ 0.38
PRPF40B-211ENST00000551063 FAM20AQ96MK3 541 aa17.41■□□□□ 0.38
PRPF40B-211ENST00000551063 FOXP1Q9H334 677 aaPredicted RBP17.41■□□□□ 0.38
PRPF40B-211ENST00000551063 UNC45AQ9H3U1 944 aa17.41■□□□□ 0.38
PRPF40B-211ENST00000551063 DISC1Q9NRI5 854 aa17.41■□□□□ 0.38
PRPF40B-211ENST00000551063 TUBE1Q9UJT0 475 aa17.41■□□□□ 0.38
PRPF40B-211ENST00000551063 TMEM265A0A087WTH1 108 aa17.4■□□□□ 0.38
PRPF40B-211ENST00000551063 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.4■□□□□ 0.38
PRPF40B-211ENST00000551063 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.4■□□□□ 0.38
PRPF40B-211ENST00000551063 POTEB3A0JP26 581 aa17.4■□□□□ 0.38
PRPF40B-211ENST00000551063 HBP1O60381 514 aa17.4■□□□□ 0.38
PRPF40B-211ENST00000551063 CXCL10P02778 98 aa17.4■□□□□ 0.38
PRPF40B-211ENST00000551063 THPOP40225 353 aa17.4■□□□□ 0.38
PRPF40B-211ENST00000551063 ZNF618Q5T7W0 954 aa17.4■□□□□ 0.38
PRPF40B-211ENST00000551063 POTEBQ6S5H4 581 aa17.4■□□□□ 0.38
PRPF40B-211ENST00000551063 FAM167AQ96KS9 214 aa17.4■□□□□ 0.38
PRPF40B-211ENST00000551063 SAMM50Q9Y512 469 aa17.4■□□□□ 0.38
PRPF40B-211ENST00000551063 COL1A2P08123 1366 aa17.4■□□□□ 0.38
PRPF40B-211ENST00000551063 TANC1Q9C0D5 1861 aa17.39■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms