RNA–Protein interactions for RNA: ENST00000550659.1

PRDM4-206, Transcript of PR/SET domain 4, humanhuman

TSL 3

Gene PRDM4, Length 837 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-206ENST00000550659 SPEF1Q9Y4P9 236 aa7.32□□□□□ -1.24
PRDM4-206ENST00000550659 ATRNO75882 1429 aa7.32□□□□□ -1.24
PRDM4-206ENST00000550659 SHANK3Q9BYB0 1731 aa7.32□□□□□ -1.24
PRDM4-206ENST00000550659 E2F8A0AVK6 867 aa7.31□□□□□ -1.24
PRDM4-206ENST00000550659 DISP2A7MBM2 1401 aa7.31□□□□□ -1.24
PRDM4-206ENST00000550659 GNAT3A8MTJ3 354 aa7.31□□□□□ -1.24
PRDM4-206ENST00000550659 CCER2I3L3R5 266 aa7.31□□□□□ -1.24
PRDM4-206ENST00000550659 ZNF205O95201 554 aa7.31□□□□□ -1.24
PRDM4-206ENST00000550659 SART3Q15020 963 aaKnown RBP7.31□□□□□ -1.24
PRDM4-206ENST00000550659 SKOR2Q2VWA4 1001 aaPredicted RBP7.31□□□□□ -1.24
PRDM4-206ENST00000550659 CYP27C1Q4G0S4 372 aa7.31□□□□□ -1.24
PRDM4-206ENST00000550659 MEX3CQ5U5Q3 659 aaKnown RBP7.31□□□□□ -1.24
PRDM4-206ENST00000550659 ZAR1Q86SH2 424 aa7.31□□□□□ -1.24
PRDM4-206ENST00000550659 UNC5CLQ8IV45 518 aa7.31□□□□□ -1.24
PRDM4-206ENST00000550659 CCDC146Q8IYE0 955 aa7.31□□□□□ -1.24
PRDM4-206ENST00000550659 CNTD1Q8N815 330 aa7.31□□□□□ -1.24
PRDM4-206ENST00000550659 IGSF22Q8N9C0 903 aa7.31□□□□□ -1.24
PRDM4-206ENST00000550659 PCDH19Q8TAB3 1148 aa7.31□□□□□ -1.24
PRDM4-206ENST00000550659 MMP19Q99542 508 aa7.31□□□□□ -1.24
PRDM4-206ENST00000550659 TRIM8Q9BZR9 551 aa7.31□□□□□ -1.24
PRDM4-206ENST00000550659 DUSP15Q9H1R2 295 aaPredicted RBP7.31□□□□□ -1.24
PRDM4-206ENST00000550659 TRIT1Q9H3H1 467 aaKnown RBP7.31□□□□□ -1.24
PRDM4-206ENST00000550659 CRTAC1Q9NQ79 661 aa7.31□□□□□ -1.24
PRDM4-206ENST00000550659 GPATCH2Q9NW75 528 aa7.31□□□□□ -1.24
PRDM4-206ENST00000550659 GABBR1Q9UBS5 961 aa7.31□□□□□ -1.24
PRDM4-206ENST00000550659 EP400Q96L91 3159 aa7.3□□□□□ -1.24
PRDM4-206ENST00000550659 SPATA31A1Q5TZJ5 1347 aa7.3□□□□□ -1.24
PRDM4-206ENST00000550659 SPATA31A5Q5VU36 1347 aa7.3□□□□□ -1.24
PRDM4-206ENST00000550659 SPATA31A7Q8IWB4 1347 aa7.3□□□□□ -1.24
PRDM4-206ENST00000550659 CRB1P82279 1406 aa7.3□□□□□ -1.24
PRDM4-206ENST00000550659 TRBV23OR9-2A0A075B6M9 112 aa7.3□□□□□ -1.24
PRDM4-206ENST00000550659 SHTN1A0MZ66 631 aa7.3□□□□□ -1.24
PRDM4-206ENST00000550659 ZNF891A8MT65 544 aaPredicted RBP7.3□□□□□ -1.24
PRDM4-206ENST00000550659 WNT9AO14904 365 aa7.3□□□□□ -1.24
PRDM4-206ENST00000550659 MAP4K4O95819 1239 aaPredicted RBP7.3□□□□□ -1.24
PRDM4-206ENST00000550659 CKMP06732 381 aa7.3□□□□□ -1.24
PRDM4-206ENST00000550659 PYGMP11217 842 aa7.3□□□□□ -1.24
PRDM4-206ENST00000550659 ID4P47928 161 aa7.3□□□□□ -1.24
PRDM4-206ENST00000550659 RAB27AP51159 221 aa7.3□□□□□ -1.24
PRDM4-206ENST00000550659 PAK1Q13153 545 aa7.3□□□□□ -1.24
PRDM4-206ENST00000550659 KIZQ2M2Z5 673 aa7.3□□□□□ -1.24
PRDM4-206ENST00000550659 SYDE2Q5VT97 1194 aa7.3□□□□□ -1.24
PRDM4-206ENST00000550659 SULT6B1Q6IMI4 303 aa7.3□□□□□ -1.24
PRDM4-206ENST00000550659 CCAR1Q8IX12 1150 aaKnown RBP7.3□□□□□ -1.24
PRDM4-206ENST00000550659 FAM9BQ8IZU0 186 aa7.3□□□□□ -1.24
PRDM4-206ENST00000550659 LINC00116Q8NCU8 138 aa7.3□□□□□ -1.24
PRDM4-206ENST00000550659 SMC1BQ8NDV3 1235 aa7.3□□□□□ -1.24
PRDM4-206ENST00000550659 CHMP4CQ96CF2 233 aa7.3□□□□□ -1.24
PRDM4-206ENST00000550659 PHACTR3Q96KR7 559 aa7.3□□□□□ -1.24
PRDM4-206ENST00000550659 TBC1D32Q96NH3 1257 aa7.3□□□□□ -1.24
PRDM4-206ENST00000550659 PLEKHF1Q96S99 279 aa7.3□□□□□ -1.24
PRDM4-206ENST00000550659 SMAD5Q99717 465 aaKnown RBP7.3□□□□□ -1.24
PRDM4-206ENST00000550659 CCDC8Q9H0W5 538 aaPredicted RBP7.3□□□□□ -1.24
PRDM4-206ENST00000550659 CABP5Q9NP86 173 aa7.3□□□□□ -1.24
PRDM4-206ENST00000550659 CLEC1BQ9P126 229 aa7.3□□□□□ -1.24
PRDM4-206ENST00000550659 KDRP35968 1356 aa7.3□□□□□ -1.24
PRDM4-206ENST00000550659 THSD7AQ9UPZ6 1657 aa7.29□□□□□ -1.24
PRDM4-206ENST00000550659 M0R2C6 588 aa7.29□□□□□ -1.24
PRDM4-206ENST00000550659 TRAF5O00463 557 aa7.29□□□□□ -1.24
PRDM4-206ENST00000550659 AKAP10O43572 662 aa7.29□□□□□ -1.24
PRDM4-206ENST00000550659 MSCO60682 206 aa7.29□□□□□ -1.24
PRDM4-206ENST00000550659 GAS7O60861 476 aa7.29□□□□□ -1.24
PRDM4-206ENST00000550659 FKBP9O95302 570 aa7.29□□□□□ -1.24
PRDM4-206ENST00000550659 SCGB1D2O95969 90 aa7.29□□□□□ -1.24
PRDM4-206ENST00000550659 U2AF1L5P0DN76 240 aaPredicted RBP7.29□□□□□ -1.24
PRDM4-206ENST00000550659 ADMP35318 185 aa7.29□□□□□ -1.24
PRDM4-206ENST00000550659 ADCYAP1R1P41586 468 aa7.29□□□□□ -1.24
PRDM4-206ENST00000550659 IL2P60568 153 aa7.29□□□□□ -1.24
PRDM4-206ENST00000550659 U2AF1Q01081 240 aaKnown RBP eCLIP7.29□□□□□ -1.24
PRDM4-206ENST00000550659 CYP27A1Q02318 531 aa7.29□□□□□ -1.24
PRDM4-206ENST00000550659 PIN1Q13526 163 aaPredicted RBP7.29□□□□□ -1.24
PRDM4-206ENST00000550659 VPS72Q15906 364 aa7.29□□□□□ -1.24
PRDM4-206ENST00000550659 RTP2Q5QGT7 225 aa7.29□□□□□ -1.24
PRDM4-206ENST00000550659 TOM1L2Q6ZVM7 507 aa7.29□□□□□ -1.24
PRDM4-206ENST00000550659 FKBP9P1Q75LS8 142 aa7.29□□□□□ -1.24
PRDM4-206ENST00000550659 TSPYL5Q86VY4 417 aaPredicted RBP7.29□□□□□ -1.24
PRDM4-206ENST00000550659 WDR75Q8IWA0 830 aaKnown RBP7.29□□□□□ -1.24
PRDM4-206ENST00000550659 NXPE1Q8N323 547 aa7.29□□□□□ -1.24
PRDM4-206ENST00000550659 CHST14Q8NCH0 376 aa7.29□□□□□ -1.24
PRDM4-206ENST00000550659 COG1Q8WTW3 980 aa7.29□□□□□ -1.24
PRDM4-206ENST00000550659 ZNF775Q96BV0 537 aaPredicted RBP7.29□□□□□ -1.24
PRDM4-206ENST00000550659 SCARF2Q96GP6 870 aaPredicted RBP7.29□□□□□ -1.24
PRDM4-206ENST00000550659 CFAP53Q96M91 514 aa7.29□□□□□ -1.24
PRDM4-206ENST00000550659 MENTQ9BUN1 341 aa7.29□□□□□ -1.24
PRDM4-206ENST00000550659 SSBP4Q9BWG4 385 aaPredicted RBP7.29□□□□□ -1.24
PRDM4-206ENST00000550659 B4GALT6Q9UBX8 382 aa7.29□□□□□ -1.24
PRDM4-206ENST00000550659 TRHDEQ9UKU6 1024 aa7.29□□□□□ -1.24
PRDM4-206ENST00000550659 ZKSCAN5Q9Y2L8 839 aa7.29□□□□□ -1.24
PRDM4-206ENST00000550659 LRRC37A3O60309 1634 aa7.29□□□□□ -1.24
PRDM4-206ENST00000550659 PKD1L3Q7Z443 1732 aa7.28□□□□□ -1.24
PRDM4-206ENST00000550659 FAM155AB1AL88 458 aaPredicted RBP7.28□□□□□ -1.24
PRDM4-206ENST00000550659 K7ESF4 209 aa7.28□□□□□ -1.24
PRDM4-206ENST00000550659 GABRDO14764 452 aa7.28□□□□□ -1.24
PRDM4-206ENST00000550659 GSTM1P09488 218 aa7.28□□□□□ -1.24
PRDM4-206ENST00000550659 LCP1P13796 627 aa7.28□□□□□ -1.24
PRDM4-206ENST00000550659 PAMP19021 973 aa7.28□□□□□ -1.24
PRDM4-206ENST00000550659 ENDOUP21128 410 aaKnown RBP7.28□□□□□ -1.24
PRDM4-206ENST00000550659 PRKAR2BP31323 418 aa7.28□□□□□ -1.24
PRDM4-206ENST00000550659 LSSP48449 732 aa7.28□□□□□ -1.24
PRDM4-206ENST00000550659 MECP2P51608 486 aaKnown RBP7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms