RNA–Protein interactions for RNA: ENST00000550536.5

RAB3IP-212, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 9,646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-212ENST00000550536 CLIC2O15247 247 aa13.47□□□□□ -0.25
RAB3IP-212ENST00000550536 DR1Q01658 176 aa13.47□□□□□ -0.25
RAB3IP-212ENST00000550536 TUBB6Q9BUF5 446 aa13.47□□□□□ -0.25
RAB3IP-212ENST00000550536 ERVK-7P63135 1459 aa13.47□□□□□ -0.25
RAB3IP-212ENST00000550536 USP17L3A6NCW0 530 aa13.47□□□□□ -0.25
RAB3IP-212ENST00000550536 USP17L4A6NCW7 530 aa13.47□□□□□ -0.25
RAB3IP-212ENST00000550536 SH2B2O14492 632 aaPredicted RBP13.47□□□□□ -0.25
RAB3IP-212ENST00000550536 CCT5P48643 541 aa13.47□□□□□ -0.25
RAB3IP-212ENST00000550536 PLTPP55058 493 aa13.47□□□□□ -0.25
RAB3IP-212ENST00000550536 USP17L1Q7RTZ2 530 aa13.47□□□□□ -0.25
RAB3IP-212ENST00000550536 RASGRP4Q8TDF6 673 aa13.47□□□□□ -0.25
RAB3IP-212ENST00000550536 FGD4Q96M96 766 aa13.47□□□□□ -0.25
RAB3IP-212ENST00000550536 FAF1Q9UNN5 650 aaPredicted RBP13.47□□□□□ -0.25
RAB3IP-212ENST00000550536 ERFEQ4G0M1 354 aa13.47□□□□□ -0.25
RAB3IP-212ENST00000550536 TDRD7Q8NHU6 1098 aaKnown RBP13.47□□□□□ -0.25
RAB3IP-212ENST00000550536 MAML1Q92585 1016 aa13.47□□□□□ -0.25
RAB3IP-212ENST00000550536 PANX2Q96RD6 677 aa13.47□□□□□ -0.25
RAB3IP-212ENST00000550536 SERPINI1Q99574 410 aa13.47□□□□□ -0.25
RAB3IP-212ENST00000550536 TRIM15Q9C019 465 aa13.47□□□□□ -0.25
RAB3IP-212ENST00000550536 TRPC5Q9UL62 973 aaPredicted RBP13.47□□□□□ -0.25
RAB3IP-212ENST00000550536 TOM1L1O75674 476 aa13.47□□□□□ -0.25
RAB3IP-212ENST00000550536 PLS3P13797 630 aa13.47□□□□□ -0.25
RAB3IP-212ENST00000550536 ALS2CLQ60I27 953 aa13.47□□□□□ -0.25
RAB3IP-212ENST00000550536 NRKQ7Z2Y5 1582 aa13.47□□□□□ -0.25
RAB3IP-212ENST00000550536 CALR3Q96L12 384 aaKnown RBP13.47□□□□□ -0.25
RAB3IP-212ENST00000550536 TBK1Q9UHD2 729 aa13.47□□□□□ -0.25
RAB3IP-212ENST00000550536 LRRD1A4D1F6 860 aa13.47□□□□□ -0.25
RAB3IP-212ENST00000550536 SLFN12LQ6IEE8 588 aa13.47□□□□□ -0.25
RAB3IP-212ENST00000550536 MAGED2Q9UNF1 606 aaPredicted RBP13.47□□□□□ -0.25
RAB3IP-212ENST00000550536 TJP3O95049 919 aa13.46□□□□□ -0.25
RAB3IP-212ENST00000550536 ADCK5Q3MIX3 580 aa13.46□□□□□ -0.25
RAB3IP-212ENST00000550536 PCDHA5Q9Y5H7 936 aa13.46□□□□□ -0.25
RAB3IP-212ENST00000550536 MAGI2Q86UL8 1455 aa13.46□□□□□ -0.25
RAB3IP-212ENST00000550536 MEIS1O00470 390 aa13.46□□□□□ -0.25
RAB3IP-212ENST00000550536 PLA2G4BP0C869 781 aa13.46□□□□□ -0.25
RAB3IP-212ENST00000550536 ZKSCAN8Q15776 578 aaPredicted RBP13.46□□□□□ -0.25
RAB3IP-212ENST00000550536 PCDHA13Q9Y5I0 950 aa13.46□□□□□ -0.25
RAB3IP-212ENST00000550536 MAGI3Q5TCQ9 1506 aa13.46□□□□□ -0.25
RAB3IP-212ENST00000550536 C7orf31Q8N865 590 aa13.46□□□□□ -0.25
RAB3IP-212ENST00000550536 NXF1Q9UBU9 619 aaKnown RBP13.46□□□□□ -0.25
RAB3IP-212ENST00000550536 LCMT1Q9UIC8 334 aa13.46□□□□□ -0.25
RAB3IP-212ENST00000550536 ARHGEF40Q8TER5 1519 aa13.46□□□□□ -0.25
RAB3IP-212ENST00000550536 MXI1P50539 228 aa13.46□□□□□ -0.25
RAB3IP-212ENST00000550536 SPOPLQ6IQ16 392 aa13.46□□□□□ -0.25
RAB3IP-212ENST00000550536 SOWAHDA6NJG2 315 aa13.46□□□□□ -0.25
RAB3IP-212ENST00000550536 CTNND1O60716 968 aaKnown RBP13.46□□□□□ -0.25
RAB3IP-212ENST00000550536 CHEK2O96017 543 aa13.46□□□□□ -0.25
RAB3IP-212ENST00000550536 HP1BP3Q5SSJ5 553 aaPredicted RBP13.46□□□□□ -0.25
RAB3IP-212ENST00000550536 EIF3BP55884 814 aaKnown RBP13.46□□□□□ -0.26
RAB3IP-212ENST00000550536 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.46□□□□□ -0.26
RAB3IP-212ENST00000550536 PCIF1Q9H4Z3 704 aa13.46□□□□□ -0.26
RAB3IP-212ENST00000550536 SLC13A4Q9UKG4 626 aa13.46□□□□□ -0.26
RAB3IP-212ENST00000550536 SYNGAP1Q96PV0 1343 aa13.46□□□□□ -0.26
RAB3IP-212ENST00000550536 IQANK1A0A1B0GTG1 560 aa13.46□□□□□ -0.26
RAB3IP-212ENST00000550536 SLC16A2P36021 539 aa13.46□□□□□ -0.26
RAB3IP-212ENST00000550536 ATG16L1Q676U5 607 aa13.46□□□□□ -0.26
RAB3IP-212ENST00000550536 PDXDC2PQ6P474 469 aa13.46□□□□□ -0.26
RAB3IP-212ENST00000550536 ZBTB33Q86T24 672 aa13.46□□□□□ -0.26
RAB3IP-212ENST00000550536 SLFN14P0C7P3 912 aa13.45□□□□□ -0.26
RAB3IP-212ENST00000550536 SRGAP2CP0DJJ0 459 aa13.45□□□□□ -0.26
RAB3IP-212ENST00000550536 DHX9Q08211 1270 aaKnown RBP13.45□□□□□ -0.26
RAB3IP-212ENST00000550536 KRT33BQ14525 404 aa13.45□□□□□ -0.26
RAB3IP-212ENST00000550536 PGBD1Q96JS3 809 aa13.45□□□□□ -0.26
RAB3IP-212ENST00000550536 RPAP1Q9BWH6 1393 aaPredicted RBP13.45□□□□□ -0.26
RAB3IP-212ENST00000550536 TCP11X2Q5H9J9 407 aa13.45□□□□□ -0.26
RAB3IP-212ENST00000550536 FRA10AC1Q70Z53 315 aa13.45□□□□□ -0.26
RAB3IP-212ENST00000550536 NSUN7Q8NE18 718 aaKnown RBP13.45□□□□□ -0.26
RAB3IP-212ENST00000550536 PLEKHF1Q96S99 279 aa13.45□□□□□ -0.26
RAB3IP-212ENST00000550536 IPO5O00410 1097 aaKnown RBP13.45□□□□□ -0.26
RAB3IP-212ENST00000550536 PSMA2P25787 234 aa13.45□□□□□ -0.26
RAB3IP-212ENST00000550536 ARL6IP4Q66PJ3 421 aaKnown RBP13.45□□□□□ -0.26
RAB3IP-212ENST00000550536 ZMYND12Q9H0C1 365 aa13.45□□□□□ -0.26
RAB3IP-212ENST00000550536 MYH15Q9Y2K3 1946 aa13.45□□□□□ -0.26
RAB3IP-212ENST00000550536 PTCH1Q13635 1447 aa13.45□□□□□ -0.26
RAB3IP-212ENST00000550536 MOCS3O95396 460 aa13.45□□□□□ -0.26
RAB3IP-212ENST00000550536 ZNF18P17022 549 aa13.45□□□□□ -0.26
RAB3IP-212ENST00000550536 CENPUQ71F23 418 aa13.45□□□□□ -0.26
RAB3IP-212ENST00000550536 ANKRD13CQ8N6S4 541 aa13.45□□□□□ -0.26
RAB3IP-212ENST00000550536 GDAP1Q8TB36 358 aa13.45□□□□□ -0.26
RAB3IP-212ENST00000550536 NLRP4Q96MN2 994 aa13.45□□□□□ -0.26
RAB3IP-212ENST00000550536 DBNDD1Q9H9R9 158 aa13.45□□□□□ -0.26
RAB3IP-212ENST00000550536 SRPRBQ9Y5M8 271 aaKnown RBP13.45□□□□□ -0.26
RAB3IP-212ENST00000550536 ERVV-1B6SEH8 477 aa13.45□□□□□ -0.26
RAB3IP-212ENST00000550536 PRPF3O43395 683 aaKnown RBP13.45□□□□□ -0.26
RAB3IP-212ENST00000550536 MT-ND3P03897 115 aa13.45□□□□□ -0.26
RAB3IP-212ENST00000550536 JAK3P52333 1124 aa13.45□□□□□ -0.26
RAB3IP-212ENST00000550536 MECOMQ03112 1051 aa13.45□□□□□ -0.26
RAB3IP-212ENST00000550536 ASAP1Q9ULH1 1129 aa13.45□□□□□ -0.26
RAB3IP-212ENST00000550536 PIGSQ96S52 555 aa13.45□□□□□ -0.26
RAB3IP-212ENST00000550536 HINFPQ9BQA5 517 aa13.45□□□□□ -0.26
RAB3IP-212ENST00000550536 MSTO1Q9BUK6 570 aa13.45□□□□□ -0.26
RAB3IP-212ENST00000550536 UNC13BO14795 1591 aa13.45□□□□□ -0.26
RAB3IP-212ENST00000550536 ARHGAP31Q2M1Z3 1444 aa13.45□□□□□ -0.26
RAB3IP-212ENST00000550536 ZBED1O96006 694 aa13.44□□□□□ -0.26
RAB3IP-212ENST00000550536 NPR1P16066 1061 aa13.44□□□□□ -0.26
RAB3IP-212ENST00000550536 CD58P19256 250 aa13.44□□□□□ -0.26
RAB3IP-212ENST00000550536 DEUP1Q05D60 604 aa13.44□□□□□ -0.26
RAB3IP-212ENST00000550536 KRT39Q6A163 491 aa13.44□□□□□ -0.26
RAB3IP-212ENST00000550536 CASZ1Q86V15 1759 aa13.44□□□□□ -0.26
RAB3IP-212ENST00000550536 PDCD7Q8N8D1 485 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms